Basic Information

Insect: Anopheles christyi
Gene Symbol: -
Assembly: GCA_000349165.1
Location: KB702028:2588-6136[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1e-07 6.4e-06 25.6 1.4 2 23 140 161 140 161 0.97

2 9 1.7e-07 1e-05 25.0 0.6 1 23 167 189 167 189 0.98

3 9 2.4e-08 1.5e-06 27.7 1.2 1 23 195 217 195 218 0.96

4 9 9.7e-06 0.00059 19.5 0.5 1 23 223 246 223 246 0.98

5 9 2.6e-06 0.00016 21.2 2.8 1 23 252 275 252 275 0.97

6 9 1.7e-05 0.001 18.7 2.4 1 23 281 303 281 303 0.98

7 9 4.6e-05 0.0028 17.3 0.5 1 23 306 328 306 328 0.98

8 9 0.0003 0.018 14.8 2.4 2 23 335 358 334 359 0.93

9 9 0.0014 0.085 12.7 3.6 1 23 379 404 379 404 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1e-07	6.4e-06	25.6	1.4	2	23	140	161	140	161	0.97
2	9	1.7e-07	1e-05	25.0	0.6	1	23	167	189	167	189	0.98
3	9	2.4e-08	1.5e-06	27.7	1.2	1	23	195	217	195	218	0.96
4	9	9.7e-06	0.00059	19.5	0.5	1	23	223	246	223	246	0.98
5	9	2.6e-06	0.00016	21.2	2.8	1	23	252	275	252	275	0.97
6	9	1.7e-05	0.001	18.7	2.4	1	23	281	303	281	303	0.98
7	9	4.6e-05	0.0028	17.3	0.5	1	23	306	328	306	328	0.98
8	9	0.0003	0.018	14.8	2.4	2	23	335	358	334	359	0.93
9	9	0.0014	0.085	12.7	3.6	1	23	379	404	379	404	0.94

Sequence Information

Coding Sequence: aaaaaCTATCGGTGTAAAATACGCTTTGCCACTGTCAAACAAtttttttCTTTGCAATTGTGTTTACTTAAGAACAAATCGCTTGCATCGCTAAAAAAGATACACAAAAACAACATTTGGAAGGCATTAAAATGCTTTGCTAGGCTTTGCAAGCAGTACTCACAGCGGAGGCTCCAGTTGACCGGAACTCGACCATACTTATTGAATCGTGTACGTTTTAAAGGAATCTCCAAAGGGATGATGCCCAACTTCTACGATGGCTCCCGTCCCACGATGGTACCCACCAGCTCCAACTTACCGGTGCTGCTGGGCAATACCGTTAATCAAGGGGATCCAAACTCCAAGAAGCTGGCACACTTCGATCTCGAAGCCACTCTGCAGACAATCGATAACGAAGTGCTCGATGGTGAAGAAGGAAGTTGCCCGATCTGTAACAAGACCTTCAGCCGAAAAACCTCCCTGCTCAATCACATCCGGAATCACTCAGCAGAGAAGAAATATGTGTGCGAATTTTGTCAGAAAGGGTTCACCCAGCAAGCAAACCTGCGTAACCACGTTCGTATTCATACCAATGAACGACCGTACGTGTGCGTCGACTGTGGGAAAGCCTTTACTCAGGTCACAAACTTAAATAACCATATGAAAACGCACCACAAAACCACCCTGTACGTATGCAATCAGTGTCCGCGCAAGTTTAGCCAAGTTACTCAATTGAACCTTCATTTAATTACCAACCACAGTTCGACTAGAGGATTTTTCTGTCCGCAGTGTCCCGATAAGTCTTTTAAACAGCAGTCACATCTGCAGCAGCATATGAAAATACACGGGACAAATTTCGGTTACTCGTGCAGCAAGTGTGAGGAAAAGTTTATACAAGAGTCACACTTGCTGCTGCATATGAAGCAGCATGGCGATTACGCCTGTACCATGTGCTCGATGACATTTAACGATGAGGTGCTGTTGAAAAAGCACGTGCAGAGGCACGTTGACGGGAGGTACCTTACCTGTCCGGTGATTAGCTGCAGCGAAGGCTTTACAATGAAGAACCACCTCACGAAGCACATGCAGATGCACCATCCGGCTGTCGATCTCAAGAAGCTGGGCGCTCAGCCTGGTGGAAACAAAACGCCGAAGCACTTCTGCCACTATCACAACTGTAACGAATCGTTCGACACGGCAGATGGTTTGAGCAATCATTTGCGAGTGGCACATGGGCTTCCGATCGCGCTGCCACTTTCTTTACCGGTGGACGACAAGAAACTGATCCAGCATGGACTGCATGGGTTGAATGGGGTCGAAACGCCACCACCACCGCATCTGCTGCACTCACAGCTCCATCCAGCCGCCTCGGTGATGAATGCCAGCTTCCAGTCATATCAGAACCAGATCAACCAGGCTAACCAGCAACTGGCGAACAGCGGCAACGGAGACAGCAAGCTAAAGGTTCTATCAGACAAAATGAGCAATTTCAATAGAATTAAAACGGAGCTACAGGCCAACATGCTGGCCCAGACGCAAAACCTATTCGGCATCTCGAACACGCTGAACAACACCTTCAACGTGCAGCCGAAACTGATCTGCACCTACTGCTATAAC
Protein Sequence: KNYRCKIRFATVKQFFSLQLCLLKNKSLASLKKIHKNNIWKALKCFARLCKQYSQRRLQLTGTRPYLLNRVRFKGISKGMMPNFYDGSRPTMVPTSSNLPVLLGNTVNQGDPNSKKLAHFDLEATLQTIDNEVLDGEEGSCPICNKTFSRKTSLLNHIRNHSAEKKYVCEFCQKGFTQQANLRNHVRIHTNERPYVCVDCGKAFTQVTNLNNHMKTHHKTTLYVCNQCPRKFSQVTQLNLHLITNHSSTRGFFCPQCPDKSFKQQSHLQQHMKIHGTNFGYSCSKCEEKFIQESHLLLHMKQHGDYACTMCSMTFNDEVLLKKHVQRHVDGRYLTCPVISCSEGFTMKNHLTKHMQMHHPAVDLKKLGAQPGGNKTPKHFCHYHNCNESFDTADGLSNHLRVAHGLPIALPLSLPVDDKKLIQHGLHGLNGVETPPPPHLLHSQLHPAASVMNASFQSYQNQINQANQQLANSGNGDSKLKVLSDKMSNFNRIKTELQANMLAQTQNLFGISNTLNNTFNVQPKLICTYCYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101107;
90% Identity: iTF_00104535;
80% Identity: -