Achr006730.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- Zfy2
- Assembly
- GCA_000349165.1
- Location
- KB698399:5392-8886[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1.5 92 3.1 0.0 2 23 154 176 153 176 0.92 2 19 2.4 1.5e+02 2.5 0.6 6 23 185 202 185 202 0.96 3 19 2.7e-05 0.0016 18.1 0.6 2 23 207 229 206 229 0.96 4 19 1.2e-05 0.00076 19.1 0.8 1 23 237 259 237 259 0.98 5 19 0.00015 0.0094 15.7 0.9 2 23 263 285 263 285 0.94 6 19 7.1e-05 0.0044 16.7 0.3 3 23 293 313 291 313 0.96 7 19 0.00038 0.023 14.4 2.0 2 23 323 345 322 345 0.95 8 19 0.22 13 5.8 0.9 1 23 352 375 352 375 0.96 9 19 9.3e-06 0.00057 19.5 4.1 1 23 380 402 380 402 0.97 10 19 0.096 5.9 6.9 6.6 1 23 408 431 408 431 0.95 11 19 0.047 2.9 7.9 0.5 2 23 644 670 643 670 0.90 12 19 3.5e-06 0.00021 20.8 0.5 2 23 701 723 700 723 0.93 13 19 0.0017 0.1 12.4 1.7 1 20 730 749 730 752 0.95 14 19 0.019 1.2 9.1 0.1 2 23 756 777 755 777 0.89 15 19 4.8e-05 0.0029 17.3 0.5 1 23 784 806 784 806 0.97 16 19 0.0036 0.22 11.4 2.0 3 21 817 835 816 838 0.95 17 19 0.00026 0.016 15.0 0.3 1 23 845 868 845 868 0.98 18 19 4.6e-06 0.00028 20.5 0.4 1 23 873 896 873 896 0.91 19 19 0.00018 0.011 15.5 2.6 1 23 902 925 902 925 0.98
Sequence Information
- Coding Sequence
- ATCTCGACCGAAGAGCCTCTACCGGAACAGGTATGTCAACAGTGCCAGACGACAGTGGCCGAATTTCACGTGTATAGCCGGCAGGTAGAAGCAAACCAGCGACAATTAAGGCTAGCGCTTGCGACGGATCATTTAGTACCACAACCCCTCGGGAGTGTCAAGATAGAGCCGGACCTTAAGATTGAATTCATTCCAACGGAAGTGACTGAAGAGCCACCGTTAGGCATTGAGTGTGTGGATGTGAAGGAAGAGTACAGTGGCAGCATATCGCTAGAATCGGAACCAGAATCGGACTCGAGCGCGTCCGATGGAGATGCCATCGGGACGCGTCGGAGGGGTCGCCGTAAAGCGAGAGAAATGAAGCTAAAGAGCACGGACAAAAGCAAGGACAAAACGGATGGCAACAATCAGGCCCGGCAGCAGGAGAAAGATGAACGGATTAAGGAGTTTTATACGCTTGAGTGTGAAATCTGTTCCATACTGTTGGATGATTTCGTGCAGCTTCAGGAGCACTATCAGCTAGTGCATGACACCCGCGGGTATATCAGGTGCTGCAATAAGCAACTGTTTCATCGCTACACCCTGCTCGATCATATCGCGGTCCACCGGGGAACGATCCGGTGTGAAGTGTGTGATAGAACCTATAAAACAAAGCGCTACCTGGCACTGCATATGGCTAAAAGTCACGGTACGGAGGAGGATCGTCCGTTCAAGTGCAACAAATGTGGGCTCGCCTATCCGAAACAGTATCTTCTCCGTTCGCATCAGCTTATGCACGTACAGGCGGAGTGTCACATCTGCAAGAAGGTGCTGTCGAGCAATTATGCACTTAAGGTGCACATCACGCAGATGCACAGTGACGATGGGAATCAGATTTGTGCAACGTGCGGTAAAATGTTCCGCACCAAGGCGGCAATGGATCGGCACATCAAGGAGCATATGGGACTGGAACCGATCGAGCGGAAGCAGTGCCAGTACTGCCAGAAGTGGTTTAACGGGAAGTACAATCTGAACAAACACATTCGCTTTCTGCACAACGAGCAGGGGCAGGTGTTTCGGTGTGATATTTGTGCGCACGAAAGCCCGAACAGTCGGGCACTGTCGTATCATAAGCAGCGGGTCCACGTGCAGGAAAAGCACGAGTGTGAGCACTGTGGCAAGCGGTTCAAGCGGAAGCTGTATCTGAGGGAGCATATTGCATCGCACACGAACGTTCCACTGTACACGTGCGAGTACTGTGGAATGAAGTTTAATTCGCATGCGAATCACTTTACGCATCGGAAAAATAAGCACCCGGAAGAATGGGAAGCACACAAGCGGATGAGGATGCTTAAGAAGATGAGCAAAAATTATGCCAGAAGGGGAGTTTCTATCACCGACGACGAGTTCGGTAATGTGATGAGCAATGTCTTTACCTTTCCGGTTTCTCGAACGGAGCCCTCTTTGCCATTGAATGTGTGTTCAAAATGTGTGTCGACGGTACGCAACTTTCACGACTATTGCCAAGAGGTGGAGAAAAATCAAGAACTTTTGTTACGAGAGTTGACCGTAGAGCGGAAAGGTAATGAATTAGAGAATGACAAACAGGATGATTTTCAGACAAAGATTGCATCTCTATCGGAAGCAAACGCAAAGAACGACGAAACAAATATCTTAgacgaacagggtgacgatgatgatgatgttgatgatgatgttgacgttgatgatgatgacgataatattgatgcgaccgaaaatatgatgccaatagagaatatcgcagtagcgttGAACGAACAGGAAGATTCTTTTTCATCCGATGGCGAGAATAGCACCACACAGTACGTCGATTCCCTCCCTGCAGATGGCGAAACCTCCAAAGAAGGCCCGAGTGAGAAATCCAAGCTGCACGAGAATGATCGCATAATTATGGAGTTTTTCAAAATGCGCTGTGAACTGTGCCCGGAACGGGTCGAGCAAAACTTCGACCGCTTCTACACACTGCAGCGACACTATCGCCGGGTGCACCAGTGCCGTGGATTTTTGCGATGCTGTGGTAAAAAGCTTTTTCGACGTTTTCGCGTAATGGAACACATAGAATCACACCGAGGAACGATCCGGTGTGAGGTTTGCGACAAACCGTTTAAAAGCAAAGGCTACCTATCACGCCACATGACCGAGCAGCACTTGAACGATGGGCCAGGCTTCTCTTGCGAACACTGTAGCCGAACATTTCAAACGCAACGGCAGATGAATGCCCATCGGCCCGCGCATGAAACGACAGTGTGTAATGATTGCGGAAAGACGGTAAGCATCCGGTACCTGAAGAAGCATGTTGCACTAATACACGAATCCCTGCGCCAATGGTTTATGTGCGATCTGTGCGGGAAAAACTTTTCCAGCAGCATGGTGCTGGATCGGCACATCAAGCAACATCAGGGCATTGAGACGATCGAAAAGGTCGACTGTCCGTTCTGCGGCAAGCAGCTGAATGGGAAGTACAATCTGCAGAAGCACGTGCGCTGTATGCACCTCGAGGCAGGGAAGGGCTACCGGTGCGATGTGTGCGGTCACGTCAGTCCGAATAGCATTGCGCTGAAGAACCATGTAAAGCGTGTACACACGGGAGAACACTTCGAGTGTGAACAGTGTGGTAAGCGGTTCAAGCGGAAAGTTTATCTAACGGAACATGTGGCTGCATTGCATACGCGCACCCCGTTGTACAGGTGCGAGTTTTGTGATGCAATGTTTAACTCGAAGGCAAACTATTATACGCACCGGAAGACACGACACAGGGAGGAATGGGAAGCGATACGAGAGGCAAGGGAAGAACAGGAGGGAGCGAATTTATGGGTATCGATGACCTAG
- Protein Sequence
- ISTEEPLPEQVCQQCQTTVAEFHVYSRQVEANQRQLRLALATDHLVPQPLGSVKIEPDLKIEFIPTEVTEEPPLGIECVDVKEEYSGSISLESEPESDSSASDGDAIGTRRRGRRKAREMKLKSTDKSKDKTDGNNQARQQEKDERIKEFYTLECEICSILLDDFVQLQEHYQLVHDTRGYIRCCNKQLFHRYTLLDHIAVHRGTIRCEVCDRTYKTKRYLALHMAKSHGTEEDRPFKCNKCGLAYPKQYLLRSHQLMHVQAECHICKKVLSSNYALKVHITQMHSDDGNQICATCGKMFRTKAAMDRHIKEHMGLEPIERKQCQYCQKWFNGKYNLNKHIRFLHNEQGQVFRCDICAHESPNSRALSYHKQRVHVQEKHECEHCGKRFKRKLYLREHIASHTNVPLYTCEYCGMKFNSHANHFTHRKNKHPEEWEAHKRMRMLKKMSKNYARRGVSITDDEFGNVMSNVFTFPVSRTEPSLPLNVCSKCVSTVRNFHDYCQEVEKNQELLLRELTVERKGNELENDKQDDFQTKIASLSEANAKNDETNILDEQGDDDDDVDDDVDVDDDDDNIDATENMMPIENIAVALNEQEDSFSSDGENSTTQYVDSLPADGETSKEGPSEKSKLHENDRIIMEFFKMRCELCPERVEQNFDRFYTLQRHYRRVHQCRGFLRCCGKKLFRRFRVMEHIESHRGTIRCEVCDKPFKSKGYLSRHMTEQHLNDGPGFSCEHCSRTFQTQRQMNAHRPAHETTVCNDCGKTVSIRYLKKHVALIHESLRQWFMCDLCGKNFSSSMVLDRHIKQHQGIETIEKVDCPFCGKQLNGKYNLQKHVRCMHLEAGKGYRCDVCGHVSPNSIALKNHVKRVHTGEHFECEQCGKRFKRKVYLTEHVAALHTRTPLYRCEFCDAMFNSKANYYTHRKTRHREEWEAIREAREEQEGANLWVSMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -