Achr003699.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- bab1
- Assembly
- GCA_000349165.1
- Location
- KB691868:23291-25983[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.6 3.5e+03 -2.9 0.0 29 36 226 233 226 240 0.80 2 3 5.1e-13 6.9e-10 37.8 0.0 1 45 476 520 476 520 0.95 3 3 0.021 28 3.8 0.8 4 20 651 666 650 666 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAAACGTACTGTCTACGATGGAACAACCACAAATCAAACCTGGTCGAGATACTGGATGCGCTGATCAAGATGGAGTGCTACGTCGACTGTACGATCTACGTCGACGACCAGGTACAGTTTAAGGCGCATCGTGTCGTGCTAGCCGCCAACTCGCCCTACTTCCAGTCGATCCTGCAGGACGTGCCGATGGATCACTGCAGCATACTGTTCCCGGGTGTGCAGGAGTTCGAGATGCGTGCCCTTCTCGAGTACATGTACACCGGTGAGGTGAACGTGACACAAGCGCAGATTCCACGCATTATGAAGATTGCGGAACAGCTGGAGGTGAAGGGCCTGTACGATATGGCGGACCTGAAGGGACGCTTCGACAAAATGGTTGACGTGGATCAGCTGATGCGTGATCGCGATCCGGCCACCACACTGCTCGCCAGCAACAACAACTACAGCAGCAAGGGTTCGTCCACGGCCAGTGCGGCCACAGCGACCGCATCGTCCTCCTCGTGGAAAGATGTGCCACCGACCAGTAGTAGTGGTGGTGGTAGCGGTAGCCATTATTCATACCACCATCAGCACCAATCATCACCGGTCATTTCCACCTCGACAAACATTTCGATTGCGCAAAGTAGCAGCTCCTCACCGCCGTACGCGTACAAATCACCGTACTCTAGCCTGTACTCGCGCAGTCCCGGTGCTGTGGAGCGAGATCGCGAGCGGGAAGAGCGTAGCCGGGATCGTTCGTCTTCTTTCTCGCATCCTGCCACCTCACCGCATCGCATTCAGTCCACCTCCGGCTCGTCAGCATCCTCGGTATCGGCTCAAATTGCACTGCAAGCACAGGCCAGCGGCAACCATCAGTCATCCTCGTCCAGCCATCATTCGAGCAGTTCGGCCAGCGCTACCTCCGCTTCAGCACAACCATCGACAGCGGCAGCAGCGGCCGCACTGGCAGCCGGTTGGCCCGGTCTCGGCCAGACACAGCTGCACAGCATGCTCAGCTCGGCGTACGACTCCAGCACCGACATGAATCCGCTCAAACGCAAGAAGCTCCAGTCGATGTCGAGCATGCTGCGCGACACACCGATACTGCGCAACGTGCTGGCACAGGCCAACCCGGCCGACTCGTCGCAAACGACGGCGGGCGGTGTACCGGCCAGTGCCGCAGCAACGGTGACCACGATACAGACAGTCCAGGGCAGCATGAAGTCCGATCCCGAGCGACCCAGCAGTCATCACTCCAATGGCAGTGGTTATAAGTCAATCAAGGAACCATCGCACTCACCCTACGCGGACAAATCCTTCGATGATGACCTGCTGGACTCGCCGCACAACTTTGGTGGTGACGCTCGGTTGGCTTCGTATGTGCCACACCAGCAGCAGAAACCGGAATGGAAGCGCTACAAGCAGTACACGCGCACCGACATCCTCAATGCGATCGAGTGTGTGCGCAAGGGCATGAGTGCGCTGCAGGCGTCACGTAAGTTTGGCGTTCCTTCCCGCACGCTCTACGATAAGGTGAAGAAGCTGGGCATTACCACCGGACGGCCGATCAACCGGGCACTGAAACGTTCGCCCAGCTCCAGTGGCAGTCCCGCCTCCTTCCCGTACGGTTTGAGCGGAGCGAGTCACATGTTTGGACCGGGCAGTGGTGCTCCCGGATCCGGATCGCACCCAGGTGATCATCACCAGCAAATGCCGTCCCAGTCGCAGCAGCAGGACGATGAAGCGTctgcagcagcagctgctgcagcggccgctgctgcCATGGCCCACCACGAGGCGGGTCGTATGATTAAGCTAGAGCACGGTAGTCACCATGCGTTACCACCGACCATCCCACACCCGGCCGCCGCCCTACTCGATCCGTCCTTCCTGCAGCAAGCATTAGAAGCACGCGGCGGTGACATTGCCGGTCGGGAGGCACTACACGCGATGGCCTTTGCAGCAGCCGCTCATGCCGCTGTAAACGGTATGAGTACGTCCCCGGGGACGCACGGAACTGCCCGCTCGCCCAGCCCGAGTGTACTGATGAAGTACATGCGGTCGGTTTCGATGAGTTCACCCGAGGACGATCGGCACCATGCGGTGCAACAGCAACAGCTGAGAGAGCGTGATATGCCCGAGGGTCGGGAGTTGCGGGAGCGTGAGGGTCATCACCATAATGGGTCGGATCCGGCCTACGCACGGCGCGATCATCCCATGGAGCAGGACTCGATAGATGAGACGGGTAGCGAGTGTGGCGAACGGCCACCCAGCGGTCCCGGCGAAGGTCCGATGGAAGGTCAGGACGATCATGTGGAGGATCTGTCCATGGGTCCGAAGCGTGACTCCGAGGAACGAAGATCCCCGATATcaccaccaccaccaccaccaccGCAGCAGCCAGCGATATCGGTCGTGCGGTCGACGCAACGTTCCCGATCACCTTCCCCGCAGCCGGCGCCCCCTTCGCTACCACCCCAGCAGCAGGGTGTCATCGTGCCAGCGCCCGGTAAGTTAAAGGAAGACTACAACATCTCCATCAAGCGGGAAATCATCGCCGACAGTAATGCACCCTCAGAATCGTCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFDKMVDVDQLMRDRDPATTLLASNNNYSSKGSSTASAATATASSSSWKDVPPTSSSGGGSGSHYSYHHQHQSSPVISTSTNISIAQSSSSSPPYAYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHPATSPHRIQSTSGSSASSVSAQIALQAQASGNHQSSSSSHHSSSSASATSASAQPSTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQTTAGGVPASAAATVTTIQTVQGSMKSDPERPSSHHSNGSGYKSIKEPSHSPYADKSFDDDLLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSSGSPASFPYGLSGASHMFGPGSGAPGSGSHPGDHHQQMPSQSQQQDDEASAAAAAAAAAAAMAHHEAGRMIKLEHGSHHALPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDDRHHAVQQQQLRERDMPEGRELREREGHHHNGSDPAYARRDHPMEQDSIDETGSECGERPPSGPGEGPMEGQDDHVEDLSMGPKRDSEERRSPISPPPPPPPQQPAISVVRSTQRSRSPSPQPAPPSLPPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101774;
- 90% Identity
- iTF_00099760;
- 80% Identity
- iTF_00095143;