Achr007386.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- -
- Assembly
- GCA_000349165.1
- Location
- KB699089:6260-8047[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00032 0.43 9.6 0.0 5 31 264 290 263 305 0.82 2 4 0.024 32 3.6 0.0 5 33 356 384 355 394 0.75 3 4 2.9e-05 0.039 13.0 0.1 3 34 422 453 421 464 0.85 4 4 6.5e-11 8.8e-08 31.0 0.1 2 42 553 593 552 595 0.93
Sequence Information
- Coding Sequence
- ATGTCACAGTCGTCTTCCGGACAGTCGAAATCGTTATTGTTGTGGTTGGACTATAAGCAGCACATGCTGGGCACTCTGCAGGACATTTACGACGCCCAACAGTATACCGACTGCCGGTTGGTTGTGCCAGATGGTGAGCTGTACGCGAACCGTCCGATACTTAGCATGGCTTCTGGCTTGTTCGAAGCAATTTTCACCAGTATGGCTGGGACGATGGATCCTTCCACGATTCTCATACCGGACATGACGTTATCCAACCTTGTACGGGTCGTGCAGTTCATCTACACCGGTAGGGTGACGTTGCATTCGAACGATGTCGTTCCGTTTATGGAAGCCTGCAGTTTGCTGCAGCTGCGAGGCGTCGAATGCTGTGGTAACCGTACGATGGGCATTTACATTGACGAAACGTCGCACTCGAACAACACACAAACATGTACCGTACCAATGGCTGCGAACCATGATTCGCTTGGCACGGCACTGAAATCGGATCCACTGGACATTTCGCTGGAAAATGAATTGAAACAACATTTCAACCAACCGCATCAACTTCCATCATTGAACTTTGAATCAGTGTCATTGGAGTCGATCGAATCGAATCGCGATACAAATGAAATATTTCTCATGGATATTTGCAAAGGCGAATTGTTTCTATCGGATGAAAGTGCTGCCGAGCCGGAAAGCTCCGACACAGACGCAGATTGCTTGGTGGAAGATAGCACGGTTGTGACAAAGATAGAAGTTATTAATGAAAGGAGTAAAACTAGGAATTATACGCCCTACCAGAATTGCCTGAAGCGGGCCCTCTTAGCGATCATTGAAGGGGGTGTTTTAAATAGAGTTGCTGCTACCCGGTACAACATTCCTACCAATAAGCTGGTGCTCTGGACAGAGAAAGTAAAGCGAGAGATGAGAAATCAATCCACCACCACTAATGTACGCGAAACGATTGCAGCTGTTATTGACGGCAGCATACAGCAATTCAAAAGTGTATTAGAAGCGAGCGATGAGAATGCGCGTGAAAAATTGTTGTGCAAGGATTCAAAAACGCTGGCGCACGACTTGCGGTTTATGCTCGCGATCCACGAAATTATCCACAATGGGATGGGAACGCATGAGGCTATCGCTCTGCTTAACACCAGCAAAAGCCAGTTACATCGACGGTTGTATAATCTCAGTAGTTCGAGACACACTAAAAGATTTCGCCGAAGGCGGAATGATTCTTTGGGCATGATTATGAGAGAAAAAGATCCGGAATTGTACGAAGCCCATATGGCGGATGCACTTAAAGCAATTAATAGCGGTACTCTATCTTTGAAGGAAGCATCATTTCAGTATCGCGTACCTATAAGTGCTCTCGGGTACAAAACGAAGATGGAGTATTTCAGTATGAAGCAGAAACGCAAACAGTCTGCAACAAAAACCGACGAGTCAGGTGGTTCCTATCCTATGAGAAATAGCGACATAGTGCCGAAGCTTGCACCAATTACAAACGCCGCCAGCAGTTCCGTGGACAATATGGATCGAACGAGCGGAGAGATCGGTGTTACACCGTCTAGCCAACTGGTGCGTGCCGCTACGGTAACGTCCTTGGCTGCACCAAGTTTTATCGCATTACCGAAGTTGGTACCGATTTCAATATCTGCCATACCGGGTTACGAAGAACGGATGCTGGCGGCAATCGATGCTATTaaaaaccaaaaaaTGAGCTACCGGGAGGCATCCTTAAAGTATAATATTGCGAAAACGGCTCTGTGGCGGATGATAAGTAAGAAGAATGAGAAATTGTAA
- Protein Sequence
- MSQSSSGQSKSLLLWLDYKQHMLGTLQDIYDAQQYTDCRLVVPDGELYANRPILSMASGLFEAIFTSMAGTMDPSTILIPDMTLSNLVRVVQFIYTGRVTLHSNDVVPFMEACSLLQLRGVECCGNRTMGIYIDETSHSNNTQTCTVPMAANHDSLGTALKSDPLDISLENELKQHFNQPHQLPSLNFESVSLESIESNRDTNEIFLMDICKGELFLSDESAAEPESSDTDADCLVEDSTVVTKIEVINERSKTRNYTPYQNCLKRALLAIIEGGVLNRVAATRYNIPTNKLVLWTEKVKREMRNQSTTTNVRETIAAVIDGSIQQFKSVLEASDENAREKLLCKDSKTLAHDLRFMLAIHEIIHNGMGTHEAIALLNTSKSQLHRRLYNLSSSRHTKRFRRRRNDSLGMIMREKDPELYEAHMADALKAINSGTLSLKEASFQYRVPISALGYKTKMEYFSMKQKRKQSATKTDESGGSYPMRNSDIVPKLAPITNAASSSVDNMDRTSGEIGVTPSSQLVRAATVTSLAAPSFIALPKLVPISISAIPGYEERMLAAIDAIKNQKMSYREASLKYNIAKTALWRMISKKNEKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095156;
- 90% Identity
- iTF_00095156;
- 80% Identity
- iTF_00095156;