Achr007385.1
Basic Information
- Insect
- Anopheles christyi
- Gene Symbol
- ttk
- Assembly
- GCA_000349165.1
- Location
- KB699089:4201-5781[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1 1.4e+03 -1.6 0.0 7 20 82 99 81 99 0.85 2 5 1 1.4e+03 -1.6 0.0 3 15 226 238 225 243 0.85 3 5 2.4e-11 3.2e-08 32.4 0.0 2 38 289 326 288 331 0.91 4 5 0.00075 1 8.4 0.0 23 39 359 375 344 379 0.89 5 5 1.5e-12 2e-09 36.3 0.1 4 38 400 434 398 440 0.93
Sequence Information
- Coding Sequence
- ATGGCGGATGACTCGTGCTTAACGTGGTTAAATTTTCGCGAGCACATGCTAAACGCCTACTACGGAATCTTCCAAACGCAGCACTACACTGATTGCCGATTGATTGTACCCGATGGCGAACTGTACGCAAACTGTCCTATACTCAGCATGGCATCCAGTTTCTTTGAGAAAATTTTAGGGGAAGGTGCACAGCCTTCTGTAGGAGCGGAAATCGCAACGATTCTCATACCGGATTTGAAGCTAGCAGCGTTACGCTCCGTACTGCAGTTCATCTACACCGGAGAAGTAAGCGTATCGCCATACGAAATGGCACCATTTGTAGAGGCATGCAGCTTCCTTCAGATACGAGGAGTACGCTTTGTCGAGGATCGCATTGTGGGTATACGATTTGGGAAGACTATCGGCTTGATGTCGGAAGAGCCAATCACCCCCAGCGAAGGGTTTGCAACGACAGACTGCTTTGCGGAAGAACTGTTCATTGGGCCGGAGGAGGATGAACGAAACGATATATCCAAAGTACAGCCCAGATCTGATGAATGTTTTATTCCAGAATCGAGTACAACTGTGCCGGAGTGTGAGGTTGAAAGTAATGGAATTGTTCAGATCGCGTTGAATGTAGAATCAGAATCAAGAGCCAGCGAACGCAGGGACGGGGAAAGGGGTGAAGTTCCACAGGATCGGTTAACGCAAGCTATTGAAACAATTCTAAAGGAACATGAAAGCTACCAGATGGCAACTATTCCTCAGTGTATCGAAACGAATGTAACAAACTCTACGGAAACAAAAGCACCGAACACTCCAACAACAGATGAGTACGAGTTGGTGCTACCGCAAACGTTACCATCCTCCGATCCATGCAGTTACGAAGCGCGACTTGATGCTGCAATCGATGCCGTGTTAAACCAGGGCATTAGTTACCGCGTAGCCTCCAGAAAGTATAACATCTCTAAAACGGTACTGTGGCGAAAGATGGTGAAAATGAACCGACCGGTTCGTGCGAGCTCACCGAAAATTAGCCACCAACGGCGGGAAGCGATCGATGCACTGAAATCGGGCGAAAAGCTTATCCACGTAAGTCGCCGGTTTGAGATTCCCCTGTCGACACTGCACCGGGAAAAACAACGGCTACACAGCAAGGGTGTTCTACCGAGCAGTGTATCATTAAAGCTGCGCGGCAAGGACGAAACTGTCAGGAAACGGTTGATGGAGGCGGTAAGCGAATGTGTTGCGGGCAGGATGTCACTTTCGGAGGCGGCCCGGGTATATGGCTTACCGAAGACGTCCATCTGGCGAAGGGTAAGATCGCTACAAACTAGTACCGAGACAAGCAGTGTGAAGCAGGGGGAACACATCAGAGATGAAGAAATCGCAGAGACACGGTATCAAAAAGAAGAGTCGATCGAGGAGGAGAATGAAGCTGAGCAATCAATGGGTGGCGTCCTGTTAAGTGCTAGCGATACGCTCGAGGTTGGAGTAATGTACATACCCAATGGAAATATTTCTTCTAGCGATTTAGCGCAGCTAAGGATTCAGCTGGCCTCAAACTATGACCATCACGTAATGAATGATAGCTCACAATaa
- Protein Sequence
- MADDSCLTWLNFREHMLNAYYGIFQTQHYTDCRLIVPDGELYANCPILSMASSFFEKILGEGAQPSVGAEIATILIPDLKLAALRSVLQFIYTGEVSVSPYEMAPFVEACSFLQIRGVRFVEDRIVGIRFGKTIGLMSEEPITPSEGFATTDCFAEELFIGPEEDERNDISKVQPRSDECFIPESSTTVPECEVESNGIVQIALNVESESRASERRDGERGEVPQDRLTQAIETILKEHESYQMATIPQCIETNVTNSTETKAPNTPTTDEYELVLPQTLPSSDPCSYEARLDAAIDAVLNQGISYRVASRKYNISKTVLWRKMVKMNRPVRASSPKISHQRREAIDALKSGEKLIHVSRRFEIPLSTLHREKQRLHSKGVLPSSVSLKLRGKDETVRKRLMEAVSECVAGRMSLSEAARVYGLPKTSIWRRVRSLQTSTETSSVKQGEHIRDEEIAETRYQKEESIEEENEAEQSMGGVLLSASDTLEVGVMYIPNGNISSSDLAQLRIQLASNYDHHVMNDSSQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00095164;
- 90% Identity
- iTF_00095164;
- 80% Identity
- iTF_00095164;