Basic Information

Gene Symbol
zfh1
Assembly
GCA_943735745.2
Location
OX030929.1:1334756-1350104[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.45 26 5.2 1.2 2 23 54 76 53 77 0.94
2 9 0.0021 0.12 12.5 0.2 1 23 294 316 294 316 0.94
3 9 0.00013 0.0075 16.4 1.3 3 23 324 344 322 344 0.96
4 9 3.5e-06 0.0002 21.3 5.8 1 23 353 375 353 375 0.99
5 9 6.5e-05 0.0037 17.3 1.3 1 21 381 401 381 402 0.95
6 9 0.00047 0.027 14.6 0.5 2 21 860 879 859 880 0.93
7 9 2.4e-05 0.0014 18.7 4.0 1 23 1316 1338 1316 1338 0.95
8 9 7.4e-05 0.0043 17.1 7.2 1 23 1344 1366 1344 1366 0.98
9 9 0.066 3.8 7.9 7.0 1 21 1372 1392 1372 1393 0.96

Sequence Information

Coding Sequence
ATGGTGTCCTGTAGCGTGGCGGTGCCGACGTACTACaaagcagcagaagaaagtaTCATGCCATCGTCGACCAAGTTTTCATTGCAATTTCCTTCCCTGACGTCTGGGCTGCCCAAGGATAGTGAAACCAATACACTAGCCGCCGCCGACTGCTGCGTCCAGTGCCCCCAATGCCACCAGACCGTTCAAGGAATCGAGATGCTCAAAGACCAcatacagcagcagcaccacagtACTGGTAGCGACGTggacgacgacagcagcagtaACCACCTGGCAGTGCCACGAGCAGAGCCTCACAACGGTGCCAGCTCGGGTGACGCTGGTAGCAGTGATCCGGATGCTGAGAACGATGACGAGGAGGGCGCCGAGGAGGATGCCGAAgtcgacgaagacgacgacgtggaCGCAGCCTCCGAAATAGTCCGGGTCCCATTCGCGCCGCTCGAGCTGCTGGTGGGGGGCAAGAGCAGCCGGGCGAGTGGAGATCTCGTCGGCAGTCGGTTACAGGCGAAGTGCATCAgtttgctgcagcagcagcaggagcagcagcttcgCCAGGCCAAAGAGcagcccaccaccggccggaaccggagcctgGCCAAGGAGGACGAGACCGACCGGGATGACGAGCAGACAGAGGTAGGAGGGTCGGAAACGACGACACTGACGCCCACGCCGATCGGCGTCGGTGGCAGTGCGGACCTCCAGCACCCTCCGTACCATCTGTCGCCGCCCTATCACCTCCAGCAGACCAATGGATCGTACGGCCGCAGCACGCCGGTGATCAGTCCGGCGCGGAGCGGCAGCAGTAACGCCAgcagcgccgccagcagcaccgccagctGCCTGCTGTCCGGTAAGGACCCCGAGATGATGTACCTCTGTGCGCAGTGTCCAGCGACGTTCGCGAGTCGCAGTCAGTACGAGAAGCACGAGATGCAGCACTCCGCCTCGGCCGTCGTGTGCTGCAAGGTGTGCAACAAACCGTTCGCCAACGTGTACCGGCTGCAGCGGCACATGATTTCGCACGACGAGTCGACCCTGCTGCGGAAGTTCAAATGCAACGACTGTGATAAAGCGTTCAAGTTTAAGCATCACCTGAAGGAGCACGTGCGTATCCACTCGGGCGAGAAACCGTTCGTCTGCAGCAACTGCGGCAAGCGCTTCTCGCACTCCGGCTCCTACTCGAGCCACATGACCTCGAAGAAGTGCATCAACATCGGCATCaagatgcaccaccaccaccaccaccaccagctccagcacaactacaacaacaacactagtagcaataacaaaaacaacacacactaCCCGCACAAGaacagtagcagtagcagcagcagtagcaacaacaacaacaatagtgGCCTTGCGATAAACGTCAACTGTGTGGCGAGTGGTGGGAGAAAGTCACAGGCGCTGTCACAGGCGCCGGTCGCTGTCATCGATCACCGTACGGCCGCCGGCAGGGCGGCCgtcgcggccgccgccgccgccgccgccgccctccACCTCGACCTGGACTGGGCGACGGGCGGGGGGATGCGGGCGCTCGGAGGGAAACCGGGCCACCTTCCCATCTCgccctcctcctcctccgcgTCCTCGTCTTCCTCGGCCCCGGTCGGCCCGCAGACCCTTGaaggatcgtcgtcgtcgtcgtcgtcggcggcggcggcggccgtagctgccgtggccgccggtgccgccggtctgccggcggcggcggcggccgacgcCCTGTTTCCGATGCTCTCCAAGTACACGCAGTCGAACTACGGTGCGATGAACCTGCTGGCCACACTCGGCAACCCGTTCTACTCGATGGCGATGATCAGCAACCAGACCTACAGCCTGCAGTGTTTGCTTGAGCTGTCGGCGgctgcccagcagcagcagcagcaccaccaccaccagcaaaccGCGGCCGACACGATGGGTTCGCTGATCTACAAACCCCACGGACAGCTGACAGGCAGCGAAGAGgcagaggaggaagaggaggcACAGGAGCCGGGCGCCGCCCGGGAGCCGGCGGCCAGTGACGCGTGTGCGGTGGCCCTACCGTCCCCCGGCAAGGGCCACGAGGACGAGCTGATCGTGGACAGCCCCGAGGAGGCCCCCATGGAGGTTGACGGGGACGGCGAGAAGGTGGAACCGCTCGCGGAATGTGATATGGCCGGTGAAGATGCGGCCGAGGACGATAGCTCTGctgcgggcggcggcggccgggaaCAGGATTCGGGTGCCACCATCAAACCGGACGATCCGGACGGGGAGGTCGAAAGGGACGGGAGTTGGCGGTTCGATCCGCTTCCGACCAAACAGGAACCACCGGACGCTGCCGATGTGCCGATGGATGATACGGGGCCAGGACACCCCACCGAGCGGCATCCGTACGGGGGTGGGCAAggatcaccggaaccgggagcaccggtggcgatgaaaacggaaccacTGGAACCGGCGGAGCGGGTGTATGAAAaatcgccgccaccaccaccaccaccgctgccgcactcttcgtcctcgtccgggttgccggcggccgtcgccgttgccgcGCAGCTACAGTGCGTGTACTGTGGTCACAACTTTTCCAACCAAACCGAGCTGATGCAACACACGCAGCTGTTCTGCAAGGAGTCGCTCCTGCGGAATCAGttcgtggcggcggctgcggtaGCGGCGAGTGCCGCCGCCATGCCGTTGACGGCGGCGTTGGGTGCGGACAGCACCACGACGTACGGGAGCAGCTGCAGTGAAGATGACACCGACTACGAGACGACGGCGCTGGTGATGAATCAAGCGGCCGGCGCCAGCCAcccgaccggtggccaggGGCACgtgacgagcagcagcagcagcggaagtggctgcagcagcaccggcagcagcaaggtTCGCGTCCGGACGGCCATCTCGGAGGAGCAGCAGAGCGAGCTGAAGCGGTACTACGCGCACAACAGCAAGCCGAGCCGGGACGAGTTTCAGGCCATCGCCCAGCACGTCAAGATGGAGGCCCGGGTGGTGCAGGTCTGGTTCCAGAACAATCGGTCCCGCGAGCGCAAGATAGGCTCGGCGCTGGGCCCGACCGGcgacccggtggtggccggagcGGCCCCCAGTTCGCCCCTGCACGCCGACCGTGCCCCGTCGGTGGTGACGGGGCACGAGGCCACCGATCAGCCGCTCGACCTGTCGCTCAAGAAGGACCTCGCGATGGCGGAAGGAGCGGCCCTCCTGAGTGCGGCGGCCAGTGACTCGACGGCCACCTCAGGGGCGGTGGGGTCCCTGCCGGCCGTCCTGCTGCAGGCTGCGGGCCAGGCCGACACCATGTCGGCGCTGAACGAAGCGATGAACCTCACGATCAAAACATCCCACTTGCCGGCCGCGTTCTACTACAACGACATTCACCCGATCCACCACAATGCCAACGCGCCGGCTCCGCTGCAGCTGAGCTTCGACGACAGCCTACGCAAAgcgtcgtccccgtcgtcgcACCACCAGCCCCTGCTGTACACGCACCTGGCGGGGCAACCGGGCACATTCCGGGGGCCGTCGATAGCGGCCCTCCACCATCCGGCCGGCCTGCCCGGTCCGCTGGATCCGATGTTCCACCAGATCTCGCCGAAACTAGCTAGCACCGGTGCTAGCGCCGGGAGCGGTACCAGCCTCGCTAGCCTTAGCCCGGTACCGCGGGACGACCTGCACGACGcggtgggcggcggtggcggtgggtaCGAGGTAACCGGCAGCAAGTACTACGGTGCGTTCAGCGAGAAGAAGATGCTCCAGTCGATGCTAAACGTGCCGAAGCGTGTGGCCCCACCCTACGTTTGCAGCACCAtcatggcggtggcgggccAGGGGAGTGCTAAGGACaatcagcatcaccagcaccagcaccagcaccaggcaccggACGCCGAGGGGCAGTACGTTTGCGATCAGTGCGATAAAACGTTCAGCAAGCACAGCTCACTGCAGCGGCACAAGTACGAGCACTCGGGTCAACGGCCGTACAAGTGCGTCGAGTGCCCGAAAGCGTTCAAGCACAAGCACCACCTGACCGAGCACAAGCGGCTGCACAGTGGCGAGAAGCCGTTCCAGTGCTGCAAGTGCCTGAAGCGCTTCTCGCACTCCGGCTCCTACAGCCAGCACATGAACCACCGCTACTCGTACTGCAAGCCGTACAGGGATGGCAAATAA
Protein Sequence
MVSCSVAVPTYYKAAEESIMPSSTKFSLQFPSLTSGLPKDSETNTLAAADCCVQCPQCHQTVQGIEMLKDHIQQQHHSTGSDVDDDSSSNHLAVPRAEPHNGASSGDAGSSDPDAENDDEEGAEEDAEVDEDDDVDAASEIVRVPFAPLELLVGGKSSRASGDLVGSRLQAKCISLLQQQQEQQLRQAKEQPTTGRNRSLAKEDETDRDDEQTEVGGSETTTLTPTPIGVGGSADLQHPPYHLSPPYHLQQTNGSYGRSTPVISPARSGSSNASSAASSTASCLLSGKDPEMMYLCAQCPATFASRSQYEKHEMQHSASAVVCCKVCNKPFANVYRLQRHMISHDESTLLRKFKCNDCDKAFKFKHHLKEHVRIHSGEKPFVCSNCGKRFSHSGSYSSHMTSKKCINIGIKMHHHHHHHQLQHNYNNNTSSNNKNNTHYPHKNSSSSSSSSNNNNNSGLAINVNCVASGGRKSQALSQAPVAVIDHRTAAGRAAVAAAAAAAAALHLDLDWATGGGMRALGGKPGHLPISPSSSSASSSSSAPVGPQTLEGSSSSSSSAAAAAVAAVAAGAAGLPAAAAADALFPMLSKYTQSNYGAMNLLATLGNPFYSMAMISNQTYSLQCLLELSAAAQQQQQHHHHQQTAADTMGSLIYKPHGQLTGSEEAEEEEEAQEPGAAREPAASDACAVALPSPGKGHEDELIVDSPEEAPMEVDGDGEKVEPLAECDMAGEDAAEDDSSAAGGGGREQDSGATIKPDDPDGEVERDGSWRFDPLPTKQEPPDAADVPMDDTGPGHPTERHPYGGGQGSPEPGAPVAMKTEPLEPAERVYEKSPPPPPPPLPHSSSSSGLPAAVAVAAQLQCVYCGHNFSNQTELMQHTQLFCKESLLRNQFVAAAAVAASAAAMPLTAALGADSTTTYGSSCSEDDTDYETTALVMNQAAGASHPTGGQGHVTSSSSSGSGCSSTGSSKVRVRTAISEEQQSELKRYYAHNSKPSRDEFQAIAQHVKMEARVVQVWFQNNRSRERKIGSALGPTGDPVVAGAAPSSPLHADRAPSVVTGHEATDQPLDLSLKKDLAMAEGAALLSAAASDSTATSGAVGSLPAVLLQAAGQADTMSALNEAMNLTIKTSHLPAAFYYNDIHPIHHNANAPAPLQLSFDDSLRKASSPSSHHQPLLYTHLAGQPGTFRGPSIAALHHPAGLPGPLDPMFHQISPKLASTGASAGSGTSLASLSPVPRDDLHDAVGGGGGGYEVTGSKYYGAFSEKKMLQSMLNVPKRVAPPYVCSTIMAVAGQGSAKDNQHHQHQHQHQAPDAEGQYVCDQCDKTFSKHSSLQRHKYEHSGQRPYKCVECPKAFKHKHHLTEHKRLHSGEKPFQCCKCLKRFSHSGSYSQHMNHRYSYCKPYRDGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00094381;
90% Identity
iTF_00094381;
80% Identity
iTF_00094381;