Abel012315.1
Basic Information
- Insect
- Anopheles bellator
- Gene Symbol
- -
- Assembly
- GCA_943735745.2
- Location
- OX030929.1:8619064-8626783[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 6.5 3.8e+02 1.6 0.0 2 23 6 27 5 27 0.92 2 15 0.3 17 5.8 0.6 1 23 1612 1635 1612 1635 0.97 3 15 0.0066 0.38 11.0 2.6 1 23 1680 1703 1680 1703 0.98 4 15 0.043 2.5 8.4 0.9 1 23 1816 1838 1816 1838 0.97 5 15 0.002 0.12 12.6 2.7 5 23 1843 1861 1841 1861 0.97 6 15 0.065 3.8 7.9 2.6 1 23 1867 1889 1867 1889 0.98 7 15 0.00081 0.047 13.9 7.7 2 23 1896 1917 1895 1918 0.95 8 15 0.00096 0.055 13.6 0.4 1 23 1928 1950 1928 1950 0.97 9 15 7e-05 0.004 17.2 2.5 2 23 1956 1978 1955 1978 0.96 10 15 0.011 0.65 10.3 0.6 3 23 1992 2011 1991 2011 0.97 11 15 4.1e-05 0.0024 17.9 1.3 1 20 2018 2037 2018 2040 0.92 12 15 0.00029 0.016 15.3 0.1 1 23 2048 2070 2048 2070 0.98 13 15 1.2e-05 0.00071 19.6 3.2 1 23 2076 2098 2076 2098 0.98 14 15 0.00063 0.036 14.2 5.8 1 23 2104 2126 2104 2126 0.97 15 15 0.0031 0.18 12.0 4.4 1 23 2132 2154 2132 2155 0.96
Sequence Information
- Coding Sequence
- ATGAATGCGCCCATCGAGTGTCCGGTGTGCACGCTGTACCTTCGGGCGGGTATGAACCTGGAGGAGCATTTGTATACGCACCCCATGGAAAATGTCATCAAAGCACTCGTATCGGTTGCTTTAAAGGGAGGATGCTCCGATAGCGACGCTGGTGCATCCACCATATTTTCCTGTGTGGTACTCGGTGGTAACGGTGGCAACGCTGTGTCCAGCGGCAACAACAGTGGCATCTTAGTTGCTGGAAGTAGCAAAACTAACAACGGCGTCCCTACAGCTACTACGCTGCTTGGTGACACAATGGCGTTAGAAGTTGCTTCTTCGAACCCTGTAGCGAGTACGCTTCGTAACACCGCTCGTACGACGCCAAACGCCATCATGTATGATGCCCAAACGACGGTTGGGTATGCGGCTACAGCTCCTTCAAGAGCAACCCTATTGACGGCTTCCGAAACGGGATCATCAGTGTCCATACCTCCTCACTTAACAACAGTCAACTCCAACATAAATAGTAACAGTAGTAATACTATTGCGGTCATGAAAACGTGTGAAGTCAGCGGCGTCACAACCTTGAGTCACTATCCGGTAAACAATGTGACTATTGTTAAGCGCGAGCTTCTCCACCAGCCGTCACAGGTCGGAAGCTCTACCTCGCTGGTCGGTTACATGCCGCCCGAACCAATGACCACCGTTACCAATCCCGTGGAACCGTGCTTGGAAGTCAGCGGAGCAGCCAGTACCGGGCCCGTAATTGTGGGATGCCCACTTGGGGTTCCGCCGAGTGCTGGTACCATTTCCATCTTTCCGCGATACACGAACGAGTTGTATTCAGGTCCTCCGCCGCCTTACAGTACGGCCATTTCGTCCTCAGTCGTAACCAACACTCAAATAATGCCACAACCCGCACCTGAGGGTGCCATAATCGGTAAGCTGGCGAGCACTAGTGGAAAGTGTAGTTCCACTGTCAGAAACACCGCTGCCGGCTACAGTGCTTCAGTAACGTTGCTACCGATCACATCCGCAACGCCCATGATGGTCGATAACATCGAGGAGTCGGACGGACTGAATAAGAGTGTTGTGGCCTGTAGTGTGCCACCTACCGGCATCGGTAATAGCAGTGCGTTCAAATTACCTTCGACTACGGGGCAGCGGGTTTGTCTGGAGAATCTGCATACCGACAAAGGTAACCGTGAAGGCGATTTTCTCGTATTGGAGCGTTCGAAAAAGGTTTTAGAGTATCGCGAGAATGAAAAGGGAGAACTTACACTGTACGAGAAGATAATCAAGTCGCCACCGTGGACAGCGAAAGTCGAACACTCGGAGCAAGTTGACCTTGAACAGGCTCACCAAAACCAGCCcagccaggagcagcagtTCCAGCTCCTTGTCGAACGTCCACCACTGGCCGGTCGCATGGGCGACGAGAGGCCCACGATATCTTGCGCCAACGAGGTGCTCATTCGCCCCGCCAATAAAATGCAACTCATCAACTTTGCTAACGTGCAGAACGTTGAGATAATCAACGATGATggagaaaaagagacagaTGATGCATTGAATGGGTTCGAGGGAGAAGAGGAAGATGTCCTGGAagtggaagaagaagaggaagaggaggaaaTGGAAGAGCTACAGGAGAACGAcaacgaaagggaaaacggCAGATATAATGACAGTAAGGATGCGCCGGTGGGCTTGAAGCGATCGACCTACTATGTTACCGGTAACGGCTGCTACTCGGGCAGTCTTGGGGTCAACGAGGTGTCGTCTCTGCCACCGGTTCCAATGTCCGACGTACCGCCCGTGTCCTCTAGTAGCGCAGTGCTTACAAGCGTCATTCGCATGGCCACGCAtccatcgtcaccgtcacctGGTGCTGCACTTCCAGGCACACCGACGGTACAATCAGAACCGTTGTCAATGTCCGAAGGCTATGGCAAAGAGAAAACAACCGTCACCGATGCTGTTGATGGTTACACCCGGCAAAAGCACGACCTGTTCTTTGAAGTTGACGCTTCGCAGCTAGAACCTACCCCCAGTACAGCTTCCAGCGGTCTCTGCCAACCTACGGCGCCGGCAACCTCCAACCGAATGGTGTCCGACTATCGTCGTCCCATTGTCTTTCGACAGCCGAAAAAACTGTCGATCAAACTGATAAGGCCGCTTCCCACTGGTAACGGGGGCACCGGTTCACTTGATGTGGATGTTTCAACGGTCACGAACGATGAGAAGGGCTCGTCACCGAAGAAACCTGCACtgggagcgaacgaaaacgtGCCAAGATCAATGGTGACGGCGACTCCTCCACCAACCGGGTCTACCAACAGTGTCGCCGTGGTGGTTCAAAAAACTAGCCAAGATGCATCGGATGCTAGTGATAGCCGCATCACCAACAAGGCGAATTTCAGCTTATTGGCCGATAACGATGGTCGCACCAGCATCGAGCAGCAAGCCCTTCAACCGTTAAAGATCAAACATGAATATCCTTTGGACAGTGCactcaacagcagcagcaccaccatcaacaaaaGTAGCGGTGgtaccatcagcagcaacaacaataatcaacGTTTAGCGACGCTTATATGCACCGAACGTTCGCCAATGGAGGCTTCTGACTATCACATAACGTATGTTAGTGATAATGGTGAAACGGTCTACGAACCACTTCACAAGACGGATCGTCCCAGTGTTGGTGCGGTGGGTGTTATggacgaggatgatgatgcaaCCACGGACAGCAAGGCGTCCATGGCGGAGCTGATTCGCGTGGCACGACAAGAATTTAGCTGCGATAAAACGGACACCATTGGGGAACCGGCCAGTAAGGCCCGAGAGGCGAAGGACGAGACCGACCGGAAGAACTCAATTTGCAGTTTGGACGGTTCGCCGGTCAATGAGGGTGGTCGGCCCTTGGAGCAAAAAGTTGTAAAATTGGAGCTCCACGATGCACTCAGGACAGTCGAGGCGAAGATAACCGAACCGCCGACACCAGGGAGGACCAATATCGCTGACAACGAAAGCAATACGGTGCCGGGGACGCAATCGTTGGTAGACACGGCAACCGCGCCGCTGAAAGATGAACGTCCAGCTCGGCCCGATCGTCGCGTCTCACAACAGCGTCTTTCCAGCGAGGAAAAAGATCTACTTGAAGCTGGCCCATCGCGAGTTGATCTAACCAACGATCAACAAGATGAGGTCGATATGAACAATGACAATGACGATCATGCCTATGGCAATGgcgaacagcagcaacggcaacagaACGATGCAGGCATCATGACGAAAGCGCTGCCCAATGCGTCTCCTTTGGTTGCCGCAGACGAGAAGCAGGACGGCCTTCCAACGAAGCACGCGTCTATACAAACTACTGTCGGCGAGGTGATGGATTCACATGATGGTGGGAAGAAGCTACCTTACGGCATTAGAATGATATTAGAGCGCTTGCCCAAGAGTCGGACGATCTATTGGTATGATGGCCGCCCGTCGTTAACCCGTCGTGTTACTCGACCGATGCGCCCGCGCCCTGGCTTTGATCAGAAGGATCTGCTCGAAGCAGGTCCTTCACAGGTGCCTGGTGGAAGCGAGCCCGGCAAAGCCCAAACCCAATGCGTAACGCAACGTGAAGGTACATCCGGAAACACCATCGCTAGCGGTGGTACCAAACGCGATGAAGTTTTGGCCGCTGATGCAGCTCCTTTTTCGGCAAGCAATTACACTTTGGACCCCCCGACACCGTCTTGGGTGCAAAAGCTCACGCCACACTACCGCAAGGCGATGCTTCTGGCGCAAAGCGAAACTAGCGACGGGGCGACTGAGGAACTGGCTGCAAGGTCACACGGCGATGATGGGGACGATCTGGAGAATTCGTCGCTCTTCCTtgagggtggtggtgccagtagtagtagcagttgCACCGCGAAGAGGGCAAGGGTTCACAGTCCGCTGGAGGCAACGAGCGTTGCTTGTGCTGTTGACGCCAGTGCCGTCTGTGACACCAACAGTAACAGTCCTGCCCTCCCGGGTAGCGGTGCAGGTACGACCGGTAGAGTTTCTAGTCGCCCGTCGTCTTCAGCCTTGTCATCCGCTTCGTCAACCAGCTCGTCTAACCTGGAGCGCGCCCTGTCGACCGAAAGCCTCAACATTCGCACGGACGAGAAGATGCCGGCGAAAGGGGAAATTTCGGAACAGGAGAGCAACGGGGATATGGACGTGATGTCGTGGAACAGGTTGTACGCGGTGGAGGAAAATATCCCCATATACCCAAGCTCGTACGATTTGTCGACTGCCCAGGAGTGCTGGAACCTCAGCAATCGTAATAAACATGCGGCATATGAGTCTGGACTGCTGCATCACTCATCACAACACCATTCGAGCGTCGCTAGTGGCGCAGACACTGGCAGTGGTAGCAACAGTACCAAACAGCAATACCACATGTCACATGGGATGGGATTCCAATTTGCAGTGCAGCAACACCAATCTTATATGCAACAGTCCACCGATGGGCTTGGAGATTGTTCGGGTGCAGGAAACCAGATGGAACCCGGAGGCGCAGAAGATGAGCAGGACGATCGCAACGAACGTGCTCGGATGAAGCGCATGAAAGTTGAGATGACGTTAGACGACATGGGCGCCAGccttcatcagcagcaacaaaagtCCCAAAACAATCAGCTGCACTTTTCCCGTCCTCGCGAAACACTGGTCAAACCGGAAGCCAGTGGTAGCGGGGTGTCGTACTTTGGCTGCGAACCGCTGTTGAAGCTTCCGTCACCCACGATAGATACGGTACGTGAAGCCGAGCGAATCACTAAAGGGAATGGAGGGCTCCGTACCTATCGCTGCGCGCAGTGTCTGCAGAGATTCTCGTCCATCGAGGAGCGGCGGCTGCATGCGAAGACTGAGCACCCACcaggccagcggcagcagtttCTGCAACAGCAATGCGCATCGGCCACGCTGATGGAGCAACCGTCACCCACGGCCGATACGGTGCGTGATGCCGAGCGATCCAGTAAAGGGTGCGGAACAATCCGTACTTATCGCTGCGCGCATTGTCTGCTGCGGTTCACGTCTAACGAGGAGCGACGATTGCACATGAAGACTGAGCACCCGCCgggccagcggcagcaaccgATGGAGGACTCGAAGGAAggcatcatcaacagcattaCGATGGCAGCCGGTAGTTCGTCCGGCAAGGCTACCGTTGCCCATTCATTCGAAGCGTCAGTGCCGGTTGTAATGAACTACATGTGGCTAAAGCAGGAGATACAGCGCAAGAGCGAAGCGGCGGCAATCGCTAGCGCGGCGAGTGGTACAATGATGAACGCCACCGagaccggtggcggcgaggaCAGCAAGGCCGACGTGATGAACAGCACCGGGTTCCTGATGGGTGGCGGGTCCTCGGTGGCCGGAACGCAGGCCGTGGCTCGCCGGCGAACTTACGTTTGTGACACTTGCAAGCAGGAATTCCAACGTTTCAATCAGTTTGACGCCCATCTTATGGAGCATCCGGCCGAGTGTGACTGCGGCCGCATGTTCAAACAGTGGCGCAACTTTTGCCTTCACCTCAAGCGCCACCTGGGTATCAAGGAGCACCAGTGTCCGATATGCTGCAAACGGTTTGTCATCAAGCAGAAGCTCGTGGAGCACGTGCGTATCCATTCGGGGGTGGCCCCGATCAAGTGTCATCAGTGCGGACTTCACTTTAAGCGCTTCTCCAACTTGGCTCAGCATCGCAACCGGCACCACTTGAACAGGTTGGTGGCGAAGAAAGATTACGTTTGTCCGCAGTGCGGCGAGGTGTTTCATACGTATGCGAAGATGCAGTGGCACAAGGAGATCCACGAGAAGCGACCAAAATCGTGCCCGTACTGTCGGGAGAAGTTCGTTCACCAGAACAGCTTAACGCGCCACATCCGCCTGTCGCACACGGAGGAGTATGCGAAGCAGCAGCTCAAGACAGAACCGTGCACCATCTGCTCCCAGCCGTACACGAAGACGAGTATGCGACGACACATGGAGACGCACACCGATGAACGCATGGCGTACGCGTGCAGCATCTGTAACAAGCGCTTCACAACCAACTGGAACCTAAAGCAGCACAAGTGGACGCACGCGAACCCAACGATGAAGCCGTACCAGTGCACGCTTTGCCCGAGTGGATTCGTGCGCCCTTCCGACTACGCGACTCACATGAACGCGCACCGGTCGGTCCGCCCGTACACCTGCAACCACTGTGGGCAGCAGTTCATTCGTAAGTACAACTGGATCCGGCATACGCGTGAGCATGAGAGGGAAAAGGTACACAACTGCGACGTGTGCGGGCGCAAGTTCCACCGGAAGTACTACCTGACTGAGCACAAGCGCATACATACGGGGGAGCGGCCCTTTTCGTGCAACATTTGCGGGAAAACTTCGGCCACtaaaacaaaccacaacaaGCATGTGCGGATTCACCACGCGCGCGACCCGTTGACGGCGGAAGGTTGA
- Protein Sequence
- MNAPIECPVCTLYLRAGMNLEEHLYTHPMENVIKALVSVALKGGCSDSDAGASTIFSCVVLGGNGGNAVSSGNNSGILVAGSSKTNNGVPTATTLLGDTMALEVASSNPVASTLRNTARTTPNAIMYDAQTTVGYAATAPSRATLLTASETGSSVSIPPHLTTVNSNINSNSSNTIAVMKTCEVSGVTTLSHYPVNNVTIVKRELLHQPSQVGSSTSLVGYMPPEPMTTVTNPVEPCLEVSGAASTGPVIVGCPLGVPPSAGTISIFPRYTNELYSGPPPPYSTAISSSVVTNTQIMPQPAPEGAIIGKLASTSGKCSSTVRNTAAGYSASVTLLPITSATPMMVDNIEESDGLNKSVVACSVPPTGIGNSSAFKLPSTTGQRVCLENLHTDKGNREGDFLVLERSKKVLEYRENEKGELTLYEKIIKSPPWTAKVEHSEQVDLEQAHQNQPSQEQQFQLLVERPPLAGRMGDERPTISCANEVLIRPANKMQLINFANVQNVEIINDDGEKETDDALNGFEGEEEDVLEVEEEEEEEEMEELQENDNERENGRYNDSKDAPVGLKRSTYYVTGNGCYSGSLGVNEVSSLPPVPMSDVPPVSSSSAVLTSVIRMATHPSSPSPGAALPGTPTVQSEPLSMSEGYGKEKTTVTDAVDGYTRQKHDLFFEVDASQLEPTPSTASSGLCQPTAPATSNRMVSDYRRPIVFRQPKKLSIKLIRPLPTGNGGTGSLDVDVSTVTNDEKGSSPKKPALGANENVPRSMVTATPPPTGSTNSVAVVVQKTSQDASDASDSRITNKANFSLLADNDGRTSIEQQALQPLKIKHEYPLDSALNSSSTTINKSSGGTISSNNNNQRLATLICTERSPMEASDYHITYVSDNGETVYEPLHKTDRPSVGAVGVMDEDDDATTDSKASMAELIRVARQEFSCDKTDTIGEPASKAREAKDETDRKNSICSLDGSPVNEGGRPLEQKVVKLELHDALRTVEAKITEPPTPGRTNIADNESNTVPGTQSLVDTATAPLKDERPARPDRRVSQQRLSSEEKDLLEAGPSRVDLTNDQQDEVDMNNDNDDHAYGNGEQQQRQQNDAGIMTKALPNASPLVAADEKQDGLPTKHASIQTTVGEVMDSHDGGKKLPYGIRMILERLPKSRTIYWYDGRPSLTRRVTRPMRPRPGFDQKDLLEAGPSQVPGGSEPGKAQTQCVTQREGTSGNTIASGGTKRDEVLAADAAPFSASNYTLDPPTPSWVQKLTPHYRKAMLLAQSETSDGATEELAARSHGDDGDDLENSSLFLEGGGASSSSSCTAKRARVHSPLEATSVACAVDASAVCDTNSNSPALPGSGAGTTGRVSSRPSSSALSSASSTSSSNLERALSTESLNIRTDEKMPAKGEISEQESNGDMDVMSWNRLYAVEENIPIYPSSYDLSTAQECWNLSNRNKHAAYESGLLHHSSQHHSSVASGADTGSGSNSTKQQYHMSHGMGFQFAVQQHQSYMQQSTDGLGDCSGAGNQMEPGGAEDEQDDRNERARMKRMKVEMTLDDMGASLHQQQQKSQNNQLHFSRPRETLVKPEASGSGVSYFGCEPLLKLPSPTIDTVREAERITKGNGGLRTYRCAQCLQRFSSIEERRLHAKTEHPPGQRQQFLQQQCASATLMEQPSPTADTVRDAERSSKGCGTIRTYRCAHCLLRFTSNEERRLHMKTEHPPGQRQQPMEDSKEGIINSITMAAGSSSGKATVAHSFEASVPVVMNYMWLKQEIQRKSEAAAIASAASGTMMNATETGGGEDSKADVMNSTGFLMGGGSSVAGTQAVARRRTYVCDTCKQEFQRFNQFDAHLMEHPAECDCGRMFKQWRNFCLHLKRHLGIKEHQCPICCKRFVIKQKLVEHVRIHSGVAPIKCHQCGLHFKRFSNLAQHRNRHHLNRLVAKKDYVCPQCGEVFHTYAKMQWHKEIHEKRPKSCPYCREKFVHQNSLTRHIRLSHTEEYAKQQLKTEPCTICSQPYTKTSMRRHMETHTDERMAYACSICNKRFTTNWNLKQHKWTHANPTMKPYQCTLCPSGFVRPSDYATHMNAHRSVRPYTCNHCGQQFIRKYNWIRHTREHEREKVHNCDVCGRKFHRKYYLTEHKRIHTGERPFSCNICGKTSATKTNHNKHVRIHHARDPLTAEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -