Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_943735745.2
Location
OX030928.2:25676290-25681611[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-14 2.1e-11 43.5 0.2 3 44 663 704 661 706 0.95

Sequence Information

Coding Sequence
ATGGAAATGGTGTCTCTGGGGCCGAAAAAGGATGGAAATCCTAATGCCGAGTTCTTcacggcaccggaaacgctgCAGGGCTTCGAAACTGTGCGGTTGTGGCTGCAGAAACATTGCAAGAAGAACCTCGCACCGGATCCACCGACGAAAGAATCGCTAGCTCATCTCATCATCCAATTCATTCAGTACCAAGAGGCTAAGCTGGGCAAGAACTCCCAGGACCCTCCGACGACGCGTTTGCCGATTCGATATTTTATGGATTTCAAGCCAGGCGGCGCCCTTTGCCACATCCTATCGACCATGTACCGATACAAGGCGGAGCAGCGCTGGCGCAAGTTCGATTTCACCGTGAACAAGAATCCGATGCGCAAGGATCCGATCGGTCAGATGGTGCTGGACATCGAGACGGCTCTAATTGAGGCAGAATGCATGCGATTGCCAATGGTGTACATCCGGCCAGAGGTGGACCGAGCGACAGCGACCAAAATTAACGACATCGTCACAAACCACCAAGGTGAAATTacgaacgacgaagaggaagcgACGCACATCATTTATCCGGTGATTGACCCACTGCCGGAGGACTACGCGAGGCCCATGTTCCGGCGCGACAAGCACGTCATGATCCATTGGTACTACTTCCCGGAGTCGTACGACACTTGGGTACCGAACACGTTCGATTTGCCGGACAACATCCCCGACAGCCCCGCATCGCCCGCTGAGCGCTGGCGTGTCTCCGCTTCATGGGTGATCGATCTAGATGATTACAATGAGTGGATGTCGGAGGAGGACTACGAGGTAGACGAAGCGGGTCGCAAGAAGGTGCATCCGCATCGGCTAGGCGTGGAGGATCTCATGTCTACCGGTGTCGAGGATAAGGTGAAGAAAACGCCAAAGGTGGTCAACTCGAAACGTAAacgatcgccatcgccggcggcgAAGGGTGGCAAGCGCAAAAGCTACCGTTCCCCCGCCTTCCAAAAGAAAcgtgccgacgacgaggaatCTGAAGATCTGACAAAGGACATGGAAGATCCGGTCCCGGAAACCAACATCACTGAAGTGAAAGCCGGTTCCAGCAATTTGGCATCTGGCCCAGCAACGCCCCAACCGAAGCGTGACCCTGATATGCTGCCGATGAAGTATGCCACTGTGACGGATTTGGACGATGATGTTGAGCGTTCGAACGCGGATCCTGGTGGAGAGGATAGTCAAGCCGGAAAGACAAGTGACAGTAGTAATACGCAGGATTTCCCACAAGGCAAGGACGACCTGGAGGACAATGTGACGGAGCAGACACATCACATCATCGTTCCGTCGTACGCAGCTTGGTTTGATTATAATTCGATCCATGTCGTTGAAAAGCGTGCCCTGCCCGAGTTCTTCAATGGTAAAAACAAATCTAAAACACCGGAAATTTTCATGGCGTACCGGAACTTTATGATCGACACGTACCGTCTCAATCCAACCGAGTATCTCACGAGCACGGCCTGTCGGCGCAACTTGGCCGGAGACGTGTGCGCAATCATGCGTGTGCATGCGTTTCTGGAGCAGTGGGGTTTGATCAACTATCAGATTGATGCTGATTCACGCCCCACGCCCATGGGACCACCGCCGACGTCACACTTCCACGTGCTGAGCGATACCCCGTCCGGGTTGCAGCCAATCAATCCGCCAAAGACGGCGCAACCGTCGGCGGCGAAAAGTCTGCTCGATCTGGACAAGAAGCCGCTcggcgaaaagaaagatcTTGAACCGTTGGGTCCTGGTGTGGTCGGCGGAATGCTCGCTGGTGCACCGGGCTTAGGTGGGGTACCACCGGTAGGGCCAGGTGCTGCGCCTGGAATGATCGGTCCCGATGGTATCAAGGTGGAACCGGGAAGCGCTCCCAGCGCCGACCCGAATGGCCAGTTCGGTCTCCGATTGGATCAATACACGAGGAAGCCGGCTGCGATGCGCAACCGGACAGCGGCCAGTATGTCCCGCGAATGGAGCGAACAGGaaacgttgctgctgctcgagggACTCGAAATGTACAAAGACGATTGGAACAAGGTGTGCGAACACGTCGGTTCACGCACACAGGACGAGTGCATTCTGCATTTTCTGCGGCTGCCGATCGAAGATCCGTACCTCGAGGATGATAACACGTTCCTCGGACCGCTGTCTTACCAGCCAATTCCATTTAGCAAGGCTGGTAATCCAATCATGTCGACTGTAGCTTTTCTGGCGTCTGTCGTCGATCCGCGCATCGCAGCCAGTGCTGCCAAGGCTGCAATGGAGGAGTTTGCCGCCATTAAGGATGAAGTGCCGGCCTCGATGATGGATGCACACCTGAAGAACGTTGAGAAGTCGAGTTTCGGTGGCAAGTTCGATCCATATGCCGGTCTCACTAACAGTGGAATTGCTGGGACCGGCgcagagaaagaaaaggaagctgaagaAGGGGAAAACAAATCGCCAGCTGCGAACGCAACGGCCGCTTCTGCGGCGACGAGTGGCGCAGGAAGCACACCTCCGGGCGGTGCGGCGAATGCTGGTCCATCCAGCGGTCctaccaccaacaccgacgTCGAGATGAAGGATGTATCGAAGAAAGAGGACACAGCCGagaaagaaaaatcaaccGATGAACCCGTTAAACCAACTGACGATTCTGATGCTCCGGCAGCAACCGAGACGAAGAATGCTACCGACGCGGACGCTACGGGCAGTCCCTCGGCGGCCACTCCGAATGCTGCGCAAGCGGCGGATGGTACCACCTCTACGGCCCCCGCTaaagataaagaaaacaaGGACGCGCCTTCGGCGGTGCCCGAATCCGCAACTGCACCCACAACGGTGTCCACAGTGGCGAAGGAGAACGCTGACCCGAAACTGTTCAACGAAGGTAACCTTCaggcggccgctgctgctgcgcttgctgctgctgccgtgaaAGCCAAGCACCTGGCAGCGGTCGAGGAGCGTAAAATCAAGAGCCTTGTGGCGCTTCTCGTGGAGACACAAATGAAGAAACTGGAAATTAAACTGCGCCACTTTGAAGAACTGGAGACGACAATGGAACGGGAGCGGGAAGGGCTCGAGTACCAGCGGCAACAGCTCATCCAGGAACGTCAGCAGTTCCACCTCGAGCAGCTAAAGGCGGCCGAATTTCGTGCCCGCCAGCAAGCCCACCAGCGCTTCCAGATGGAGCAAGGTCagtggcaacagcagcaacaacaggcagcagcggcacagcagcagcaagcggccgcacaacagcagcagcacctgcagcatcagcaacagcacccgcaccagcagcagccccaagGACCGACGGCGGTCTCCGGtccaccgacagcagcagctgcttcaGGCCAACACTCTGCCACGGCCGTACCGCACAACGCAATGCCCAATCCGGCAGCTAATGCTCAAAAGCTGCAACAGACGCCATCTATCGCTGGTGgcccggcagcaacagcacctgGGGTACCGCCAATGCCTGGGGCCAACAGCTCCCAGGGCCCTCCGGTGGTGCCGCCAACATCCTTACCCTTGGTCAACAACAGCCACATCCCGGTAGTAGCAGCGGGCAACGGTATCCCTCCTACCTCCATTCAACCCTCCTCTACGAATCCTACTACCGACGGCACTATGCCAAATAATATTATGCCCCCGGCGGGAacgccacagcagcagcaaccacaagTGGCAGCACCGCCTTCCCCGTCCGCGGGACCCCCGGCGGCGGGCGACGGAACGACAGGTCCCGTGCTGCCCGAAGCAACTCCAGGTCATGCGGTGCCAATGGTCCCCTCCTCTGGCCCTGGATCCCTGGCCCAGCACCAACCGGCCCAACCGCAGGACCATCACTCGGGGTCGGTGTCGGCAGGGCAGCAGCCACAGGTCGCGCCTCTGCAAGTGGGCGGCGCCGGAGCCTCGGCTCTTCCTGTCACATCCTTGATCGGAGCCCCATCACCGGAAGAGGCAGCTTCGGTAACGCCCCCGTCCGCGATCAGTGGTGGATCGGCACCGGAGGGCAACCAGCCACCAGAGACGGCGACACCCAACGCTCCCGGGGAGACTGGAGTACCGAATCTTCCGACGAACGGAGCCACCGCCAGCGTACCACCACCGAGCGCGACGGCGGTTCCACCTTCGTCATAA
Protein Sequence
MEMVSLGPKKDGNPNAEFFTAPETLQGFETVRLWLQKHCKKNLAPDPPTKESLAHLIIQFIQYQEAKLGKNSQDPPTTRLPIRYFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKNPMRKDPIGQMVLDIETALIEAECMRLPMVYIRPEVDRATATKINDIVTNHQGEITNDEEEATHIIYPVIDPLPEDYARPMFRRDKHVMIHWYYFPESYDTWVPNTFDLPDNIPDSPASPAERWRVSASWVIDLDDYNEWMSEEDYEVDEAGRKKVHPHRLGVEDLMSTGVEDKVKKTPKVVNSKRKRSPSPAAKGGKRKSYRSPAFQKKRADDEESEDLTKDMEDPVPETNITEVKAGSSNLASGPATPQPKRDPDMLPMKYATVTDLDDDVERSNADPGGEDSQAGKTSDSSNTQDFPQGKDDLEDNVTEQTHHIIVPSYAAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIFMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTAQPSAAKSLLDLDKKPLGEKKDLEPLGPGVVGGMLAGAPGLGGVPPVGPGAAPGMIGPDGIKVEPGSAPSADPNGQFGLRLDQYTRKPAAMRNRTAASMSREWSEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPYAGLTNSGIAGTGAEKEKEAEEGENKSPAANATAASAATSGAGSTPPGGAANAGPSSGPTTNTDVEMKDVSKKEDTAEKEKSTDEPVKPTDDSDAPAATETKNATDADATGSPSAATPNAAQAADGTTSTAPAKDKENKDAPSAVPESATAPTTVSTVAKENADPKLFNEGNLQAAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQMEQGQWQQQQQQAAAAQQQQAAAQQQQHLQHQQQHPHQQQPQGPTAVSGPPTAAAASGQHSATAVPHNAMPNPAANAQKLQQTPSIAGGPAATAPGVPPMPGANSSQGPPVVPPTSLPLVNNSHIPVVAAGNGIPPTSIQPSSTNPTTDGTMPNNIMPPAGTPQQQQPQVAAPPSPSAGPPAAGDGTTGPVLPEATPGHAVPMVPSSGPGSLAQHQPAQPQDHHSGSVSAGQQPQVAPLQVGGAGASALPVTSLIGAPSPEEAASVTPPSAISGGSAPEGNQPPETATPNAPGETGVPNLPTNGATASVPPPSATAVPPSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00097000;
90% Identity
iTF_00097000;
80% Identity
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