Abel001546.1
Basic Information
- Insect
- Anopheles bellator
- Gene Symbol
- bab1
- Assembly
- GCA_943735745.2
- Location
- OX030927.2:4951604-4954467[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.69 1e+03 -0.7 0.0 8 23 86 102 84 103 0.75 2 5 2.9 4.2e+03 -2.7 0.1 29 36 226 233 222 240 0.82 3 5 2.3 3.3e+03 -2.4 0.1 6 16 385 395 384 396 0.88 4 5 1.8e-12 2.6e-09 36.3 0.0 1 45 494 538 494 538 0.95 5 5 0.027 39 3.7 0.8 4 20 691 706 690 706 0.93
Sequence Information
- Coding Sequence
- aTGGGCAGCAGCGAGGGGCAGACGTACTGTCTGCGGTGGAACAACCACAAGTCGAACCTGGTCGAGATCCTGTTCGCGCTGATCAAGATGGAGTGCTACGTCGACTGCACGATCTACGTGGACGAGCAGGTGCAGTTCAAGGCGCACCGGGTCGTGCTGGCGGCCAACTCGCCCTACTTCCAGTCGATCCTGCAGGACGTGCCGATGGACCACTGCAGCATCCTGTTCCCGGGCGTGCAGGAGTTCGAGATGCGCGCCCTGCTCGAGTACATGTACACGGGCGAGGTGAGCGTGACGCAGGCGCAGATCCCGCGCATCATGAAGATCGCCGAGCAGCTGGAGGTGAAGGGCCTCTACGACATGGCCGACCTGAAagggggtggcggcggtggcggtgccggcgTCGGAGGGCGCTTCGacatcgaccaccaccagcaccagctgctgcagaaccaccaccatcgcgaCCCGGccacgatgctgctggccagcaacaacaactacaacaaGGCCGGAAGCGGCGTTGGCCACTGCAGCTCGGCGGCcgcttcctcctcctccgcgTTCCAGTCGGCCCCGTCGCCCGGTGCAATCGCCACATCGTCGACGGCCACGAACGTGGTGTCGCAggcccacagcagcagctcgtcaCCGCCCTGCACCACCTACAAGTCACCCTACTCCAGCCTGTACTCGCGCAGTCCGGGTGCGGTCGAGCGGGACCGCGAGCGCGAGGAACGCAGCCGCGACCGGTCTGCCTCGTTTTCGCACTCCTCCACCACCCCGACCACGTCCTCACCGCATGCGGCCTCCTCCAGCGGTGCCAGCGCTATCGCCACGACGATCCAACAGATCGGTGGCTCGACGGCCTccacatcgtcatcgtcggcagcggccgccgccgccctaGCCGCCGGCTGGCCCGCCCTCGGCGCCCAGATCCCGGTCACACTCGCCCAGACGCAGCTGCACAGTATGCTCAGCTCGGCGTACGACTCCAGCACCGACATGAACCCGCTCAAGCGCAAGAAGCTCCAGTCGATGTCGAGCATGATGCGCGACACGCCCATCCTGCGGAATGTCCTCGCCCAGGCCAACCCGCCCGACTCGTCGCAACCCCTCGTCGGTGGTTCTCCCTCGTCAGCGGCGACCGCAGCCGCAGTGGCCACCATCCAAACCGGAAGCCTGCACCTGAAAGGATCCTccggcggtggaggcgccgGCAGCGGCGTCTGCGGTTCCGGAGTACCGGAGCACCCGGAGCGTCCCAGCAGCCACCACTCGAACGGTAGTGGCTACGGCAAGTTGATCAAGGAACCGCCCCACTCGCCGTACGCGGACAAGTCCTTCGAGGACGAGCTGCTTGAGTCACCCCAtggtggcttcggtggtgggGTCGGTGGCGCTGACCCACGGCTCGCTTCGTACGtgccgcagcaccagcagcagaagccgGAGTGGAAGCGCTACAAGCAGTACACCCGGACGGACATCCTGAACGCGATCGACTGCGTGCGGAAGGGCATGAGTGCGCTGCAGGCGTCGCGCAAGTTCGGTGTCCCCTCGCGCACCCTCTACGACAAGGTGAAGAAGCTGGGCATCACGACGGGCCGCCCGATCAACCGGGCCCTCAAGCGATCGCCCAGTTCCGGTGGCAGTCCGGCCCCGTTCCCGTACGGGTTGAGCGGCACCACGCACCACCCGCACAGCCACATGTTCCCCGGTGGCACGGGGGGAGCCGGTGGACCGGGTGaccctcaccaccaccatcaccagcaccaacaccagcagctTCCGTCGCAGtcctcgcagcagcaacagcagcaggatgacGATGAGTCGGGCacatcggcggcagcggccgcggcagcagccgccgcagcggcagcagcccTCGCCCATCACGAGGCGGCCGGGCGGATGATTAAGCTGGAGCACGGCAGCCACCACGGTGGGTTGCCACCGACGATACCGCACCCAGCGGCCGCCCTGCTCGATCCGTCGTTCCTGCAGCAGGCGCTGGAGGCGCGCGGTGGCGACATTGCGGGGCGCGAGGCACTCCACGCGATGGCGTTCGCTGCTGCGGCCCATGCCGCCGTCAACGGGATGAGTACGTCGCCCGGGACCCACGGGACCGCCCGCTCGCCCAGCCCGAACGTCCTCATGAAGTACATGCGTTCGGTCTCGATGAGCTCTCCGGAGGATGGGGCCGATCTGCACCACCACGGGgggcaccaccaacaccaccaccatggtCACCACCATCATGGACCACATCCGGATGAGCGGCACCACCAGAATGGCGGACGCCGGAGGCGCGATGCCCTCGCCGACGAGCTGCCGATGGAGCAGGACTCGATCGACGAGACCGGCAGCGAGTGTGGTGGTGACGGGGGCCGTCCGTCCTCGAGTGCTGCCGGCGGACCGCCCGGTCCGGACGACCACGTGGAGGACCTGTCGATGGGCCCCAAACGCGACTCGTCCGAAGAGCGGCGCGGCCTCTCGCTGTCACCCgtcagtggcggtggccacgtggtACGCCGCCTACCGTCAAGGTCACCGTCTcctgcgccgccaccaccaccaccaccaccaccgcaacaACCGGCACAGCAAGGGGTCATagtgcccgggccgggcaagcTGAAGGAGGACTACAGTCTCGCCATCAAGCGCGAGATCACCATCGCCAAcgacagcggcagcaacgTGGCCGGCCCCACGTCGGAGTCTTCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILFALIKMECYVDCTIYVDEQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVSVTQAQIPRIMKIAEQLEVKGLYDMADLKGGGGGGGAGVGGRFDIDHHQHQLLQNHHHRDPATMLLASNNNYNKAGSGVGHCSSAAASSSSAFQSAPSPGAIATSSTATNVVSQAHSSSSSPPCTTYKSPYSSLYSRSPGAVERDREREERSRDRSASFSHSSTTPTTSSPHAASSSGASAIATTIQQIGGSTASTSSSSAAAAAALAAGWPALGAQIPVTLAQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMMRDTPILRNVLAQANPPDSSQPLVGGSPSSAATAAAVATIQTGSLHLKGSSGGGGAGSGVCGSGVPEHPERPSSHHSNGSGYGKLIKEPPHSPYADKSFEDELLESPHGGFGGGVGGADPRLASYVPQHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSGGSPAPFPYGLSGTTHHPHSHMFPGGTGGAGGPGDPHHHHHQHQHQQLPSQSSQQQQQQDDDESGTSAAAAAAAAAAAAAALAHHEAAGRMIKLEHGSHHGGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRSVSMSSPEDGADLHHHGGHHQHHHHGHHHHGPHPDERHHQNGGRRRRDALADELPMEQDSIDETGSECGGDGGRPSSSAAGGPPGPDDHVEDLSMGPKRDSSEERRGLSLSPVSGGGHVVRRLPSRSPSPAPPPPPPPPPQQPAQQGVIVPGPGKLKEDYSLAIKREITIANDSGSNVAGPTSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00094584;
- 90% Identity
- iTF_00094584;
- 80% Identity
- iTF_00094584;