Abel004113.1
Basic Information
- Insect
- Anopheles bellator
- Gene Symbol
- bab1
- Assembly
- GCA_943735745.2
- Location
- OX030927.2:42655574-42658349[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.7e-14 52.9 0.0 1 43 27 70 27 72 0.95 2 2 3 4.3e+03 -2.8 0.1 14 22 405 413 402 415 0.80
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGCTGGAACAGCCAGAACCTGATCCATCACCTGCGCTTTCGCGAGCGCGGCCCGCTAAAGTCCTGGCGCCCGGAAACGATGGCCGAGGCCATCTTCAGCGTGCTGAAGGAGGGCCTGTCGCTATCGCAGGCCGCCCGCAAGTACGACATCCCGTACCCGACGTTCGTGCTGTACGCGAACCGCGTCCACAACATGCTTGGCCCGTCGATCGACGGCGGGACCGATTTGCGGCCGAAGGGACGCGGCCGGCCGCAGCGCATCCTGCTCGGCATCTGGCCCGACGACCACATCAAGGGCGTCATCAAGAGTGTCGTCTTCCGCGATGCCAAAGAAATGAAGGAGGAGCCCATGATGTACGGAAGACACTCTCCTTTTCCCTTTCAAGACAACAACCCCCTGAGCTACCCGTCGAGCGCCCCGAACGGCCAGCTTtcggccgccggcgccgctgccgtcgtccCGGACGGCATGTCGCAGGACGCcctgacggcggccacggtggcggctGTTCGGCAGCAAATGTGCAAcatggtggccgccgcccagCACCACCCGGATGCGGCTAACCTGGTGGCGGCCGCGTCCGGCTTCAATCTGCCGTCCCACTGTGCTACCCCGTCGAGCCTCAGCATCCACCCGTCGGCTGCTTCGGCCGCCGTagccgcggccgctgcagccgccgcggccgcttccggccctggcggttccggcggtgccggttcgTCCGGTGCCATCCCCGTGCCGAAGATCGGTTCCCCGGCCGTACCCTCGTCCGCCGGTCTCGGCGGGGGCAATGCTGGGGGCGGTTCGGGAGGCATTCCGATGCCACGCCTCGGATCGCCGGCGGGCGGTCAGACGAAGGATCACGATCTACACGGCAGTTCGCCACTGTCTCGCGGAActccccccggtggccggtcagCAGGTGGTGGCCGTTCCGGCGCGGAACAGGGTAGCCGCCCGACTCTCCAAAGCTCGGCTTCATCCACGTCCGTCAATCACGTTCACCATTCTCACCTCCAAactcaccaccatcaccagcaacatcagcaccatcagcaccagcaccaacagcagcagcatcaacagcagcagcagcagcagcaacagcagcaacttccccaccatcatcaccagcaccaccagccccaccacggcggccaccacccacTGGCCCATCTGGTTGGGTCGGCGGCCAGTTCCGGCGGGCTCAGCATAACGAAGCTCGGTTCGCCCGGGTCGGCGCACGATCtgcgcatcagcagcagcccgcaGGACGAGAGCCCTCTCGCGTCTCCGATCGGCGGCCTGGCACTCGAGCCGGCCGTCAACCTCGCCCTTGGAGCCGCCGGCCGCCAGACACCAGACGATGGGTGCCGCAGCCTGGTGCCGCCACCGTACCGCAGCAAACCCCCGTCCCGGGGTGGAGCAGGAGGTACCGGGTATGGGTCGTGCGGCGGTGCGTCCCCTCCGCGCCCCGAGCATCTCTTCCAGGATCCGGACATTGCGGCGCTCGTGGCCAACACGCGCATCTGCCCGCCGTCCCGGGCCGCCAGCACCatcacgaccaccaccaccgagtaCCGGGAGGCATCCGtgcggccaccgaccgccaTCAAGGTCGAACCGCTGGCTGAGTGCCGCGGGGACTAA
- Protein Sequence
- MWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKSVVFRDAKEMKEEPMMYGRHSPFPFQDNNPLSYPSSAPNGQLSAAGAAAVVPDGMSQDALTAATVAAVRQQMCNMVAAAQHHPDAANLVAAASGFNLPSHCATPSSLSIHPSAASAAVAAAAAAAAAASGPGGSGGAGSSGAIPVPKIGSPAVPSSAGLGGGNAGGGSGGIPMPRLGSPAGGQTKDHDLHGSSPLSRGTPPGGRSAGGGRSGAEQGSRPTLQSSASSTSVNHVHHSHLQTHHHHQQHQHHQHQHQQQQHQQQQQQQQQQQLPHHHHQHHQPHHGGHHPLAHLVGSAASSGGLSITKLGSPGSAHDLRISSSPQDESPLASPIGGLALEPAVNLALGAAGRQTPDDGCRSLVPPPYRSKPPSRGGAGGTGYGSCGGASPPRPEHLFQDPDIAALVANTRICPPSRAASTITTTTTEYREASVRPPTAIKVEPLAECRGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00096990;
- 90% Identity
- iTF_00096990;
- 80% Identity
- -