Basic Information

Gene Symbol
kn
Assembly
GCA_943735745.2
Location
OX030927.2:1894949-1937435[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.2e-70 8.6e-67 225.4 0.0 10 158 126 262 117 263 0.94
2 3 6.2e-138 4.5e-134 447.6 0.0 182 385 263 493 263 497 0.99
3 3 4.7e-09 3.4e-05 22.0 15.1 424 503 498 579 493 615 0.70

Sequence Information

Coding Sequence
ATGTGGGTTCCTTCGTCCAGCAACAACGAAATTCCGGCATCCTGCGGCGCTCGCATATCTGGCATATGCAACAATCCACCCGGGAGCGTGGAACGGGCCCGAATGACCAATCTGCAACCATCGCTGGGGGATCCTGTCTTCCATCGGACCGGGcccaaaacggaagaaaaattgtGGTCCACGGTGTACGATAACGGTCTAAAGCTGCGTTCGGACGAGACCGTGCCGGGCTTTAGCTCGGCCTCGCCCTGGCCCACCCTCGAGCTGGAATGGGGCCGCAAGCTGTATCCCTCGTCGGTGCCACGGGGCGCCGGAGGGATGATGTTCGGGCTGCCCCCGTCCGGGGCCGACATGAACCAGCCGCGCGGCCCGATGACGTCGCTCAAGGAGGAACCGCTCGGGGCCCGCGCCTGGATGCAGCCGGCCGTCGATCAGGCAAATTTGGGCATCGGACGGGCCCACTTCGAGAAGCAACCGCCAAGCAACCTGCGGAAGTCGAACTTCTTCCACTTTGTCGTGGCGCTGTATGATCGGGCCGGGCAACCCATCGAAATCGAGCGGACCGCTTTCATCGGTTTCATCGAGAAGGACCAGGAATCGGACGGTCAGAAGACAAACAACGGCATCCAGTACCGGTTGCAGCTACTCTACGCTAATGGTGCCCGCCAGGAACAGGATATCTTCGTGCGACTGATCGATTCCGTAACGAAACAGGCCATCGTCTACGAAGGACAGGACAAGAACCCGGAGATGTGCCGAGTACTGCTGACGCACGAGGTCATGTGCAGATTTTTCCTTAAGTTTTTCCTCAAGTGCAACCAAAACTGTCTGAAGAATGCTGGCAACCCGCGGGACATGCGACGATTTCAAGTAGTGATAGCGACCCAGGTGGCCGTGGACGGGCCTCTGCTGGCCATCTCGGACAACATGTTCgtccacaacaacagcaagcaCGGGCGCCGGGCGAAGCGGATCGATCCCGAAGGTACAGCCAACTCACCCTTGGCAATGTCGGGCCACCATCTGGCCCCGGACAGTACGTACGACGGCATCTacccgccgctgccgatggcTACGCCCTGCATCAAGGCCATCTCACCGAGCGAAGGCTGGACCACGGGCGGTGCCCAGGTGATTATCGTCGGTGATAACTTCTTCGACGGGCTGCAAGTCGTCTTCGGGACGATGCTGGTCTGGAGTGAGCTTATCACCTCGCATGCGATCCGAGTTCAAACGCCACCCCGCCACATACCAGGAGTCGTCGAGGTAACCCTCTCCTACAAGAGCAAACAGTTCTGCAAGGGTTCGCCCGGACGCTTTGTCTATGTCTCCCTCAGCGAACCGACGATTGACTATGGGTTCCAGCGACTCCAGAAGCTGATCCCGCGCCACCCGGGTGATCCGGAGAAGCTACCGAAGGAGATCATTCTGAAACGGGCCGCGGACCTAGCGGAGGCACTCTACTCGATGCCTCGCTCCCCGAACAGCTCGTCCGGCTTCAATTCCTACAGTGGCCAGCTGGCGGTTAGCGTGCAAGATGGCACCGGTCAGTGGACTGAAGACGAGTACACTCGGGCCCAAAGCAGTAGCGTTAGTCCCCGGGGTGGATACTGTAGCAGCGCCTCGACGCCGCACTCGTCCGGTGGCGGATCGTACGGAAGCAGCAACGGGTACACAACGGCACCCAACATGACCGGGCTGTCGTCTTCGCCTGCCAGCGTCTTCAATTCCACCACAAGAATCAACGGTCTGATGAGTGGCGGCAGTGGCTTCAGTCCGTACTCGATGACGACTTGCGGCACCCAAGGATACACCCCAAGTCCGCTGGCGGCAACCACCACGACCAAATGA
Protein Sequence
MWVPSSSNNEIPASCGARISGICNNPPGSVERARMTNLQPSLGDPVFHRTGPKTEEKLWSTVYDNGLKLRSDETVPGFSSASPWPTLELEWGRKLYPSSVPRGAGGMMFGLPPSGADMNQPRGPMTSLKEEPLGARAWMQPAVDQANLGIGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPIEIERTAFIGFIEKDQESDGQKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIVYEGQDKNPEMCRVLLTHEVMCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRIDPEGTANSPLAMSGHHLAPDSTYDGIYPPLPMATPCIKAISPSEGWTTGGAQVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSPNSSSGFNSYSGQLAVSVQDGTGQWTEDEYTRAQSSSVSPRGGYCSSASTPHSSGGGSYGSSNGYTTAPNMTGLSSSPASVFNSTTRINGLMSGGSGFSPYSMTTCGTQGYTPSPLAATTTTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00517500;
90% Identity
iTF_00401505;
80% Identity
iTF_00096858;