Basic Information

Gene Symbol
grh
Assembly
GCA_943735745.2
Location
OX030927.2:42180574-42235234[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.89 4.3e+03 -3.6 1.5 103 139 120 155 112 164 0.45
2 2 6.8e-64 3.3e-60 202.8 0.2 24 221 485 677 472 679 0.93

Sequence Information

Coding Sequence
ATGCTTTCCACTACCACTAGACGGCGGATTCAATCGACGGCGGCACATCCGACCGATTCGCCGATGTCGACCGATCCGTCACCGGTGCACGGTGTCACCGGAACCGACGGCAGCAACATCATCCATCTGGCCACCGGCAATGGCAACAATGGCACCGCACAGGCGATCACTTACGCCCGATACTACGACCAACAGGCGTCGCCGCTGGCACCGTCAACCGGCAGCTCGGGCGTGATGCTCGGCGGTGGTATCGGTGCCGGAAGCAACAACGGTGGCCATCCGGTCTCGTCCGGCAGCCCGGTCGAGCAGGATCCGGGCGGTGCCATCTCGCCTACTCTCAACCTCAttcaacaccaacaccaccatcagcagcaacagcagcaacagcatcaccagcaacacGATCACCACACGCAAAACGatcctcagcagcagcagcaaattcATCAactccacaacaacaatggcaccTTCGTCTACGAGTACTACAAGCTGCCGACCGATGGCAAGGACGGTGGCCTGCAGTGGGCAAGCAATCCGAGCAAGCTGAACGGCCAGACCACGCCCCTCGACGTGGACATCCAGGGACTGCTGCTCGGGGCCCAATCGGCGATCAGCGTCAAGCGCGAACCCGAAGACCTGCGCAAGGAGCCGAAAAATCCCCGAAGCCAGAAGgtttcgtcgtcgtcgtcgtcgtcgtcgtcgttgccgtcgccTCACGTTAGAGAACCTCCACCCAGCCCTGGAAGTCCTTCAACGGAAACCATGTATGCTGCCCCCGGCAGCACGCAGATCTACCTGCAGGGTCCTTCCCATCAGAACAGCACGGCAGCGTCGGCCAGCTCCAATGTGAACACGAATTCGCCCAGCCCCGGCTCCTACGCACAGTATGACATGTATCCGCCGAACAGACTCGGCCCGGGTGGGTCGGCGTTCATCACCGAGCCGTACACGTACCGCGAGTACTTCGACAACCAAGGATATGCGCCGGCCCGCACCATCTACGGCACGGCGACCGACTCCGAGGGTCCGCAGCCGGCCACCACGTACGAGGGCCGCTTCACGAAGACCGGCTCGATCTACACCAAGACGATCACGTCGGCCGGCCTGACGGTGGACCTGCCGAGCCCGGACTCGGGCATCGGGGCCGACGCCATCACGCCCCGGGATCAGAACAACGTCCAGCAGTCGTTTGACTACGCGGAACTCTGTCAGGCTCCGACCGGGCTGCTCGATCCGAATGCCGCCGGCCACATACCGGCGTCGGTGGCCAGCCTGCAGCGCAACCTGGTGGTCAACGGGAGCCAGAACAGTCCGACCACGTCGCTCGGTAgctcatcggcggcggccgcggccgtcgccaccgtggccggtgccgtcgtcCCGCCCCGTTCCCGCCCCTGGCACGACTTTGGACGACAGAACGATGCTGACAAAGTGCAGATACCAAAAATATACACCGACGTCGGCTTCAAGTACTATCTGGAGAGCCCGAGCAGCTCGAACCAGCGCCGGGAGGACGACCGGATAACGTACATCAACAAGGGACAGTTCTACGGCATCACGCTCGAGTACGTGCACGACCCGGACAAGCCGCTCAAGAACCAGACCGTGAAGAGCGTCATTATGTTGCTGTTCCGCGAGGAGAAGAGCCCGGAGGACGAGATCAAGGCGTGGCAATTCTGGCACAGTCGGCAGCACTCGGTGAAGCAGCGAATACTGGATGCCGATACGAAAAACTCCGtcggactggctggctgcatcGAGGAAGTGTCGCACAATGCGATCGCCGTCTACTGGAATCCGCTCGAGAGCTCCGCCAAGATCAACGTCGCCGTCCAGTGCCTGAGTACCGATTTCAGCAGTCAAAAGGGTGTAAAGGGCTTACCGCTACACCTGCAGATCGACACGTTCGAGGATCCGCGCGATACGACCGTCTTCCACCGGGGCTACTGTCAAATCAAAGTCTTTTGTGATAAGGGTGCCGAACGTAAGACGCGTGACGAGGAGCGCCGGCTGACGAAGCGAAAGAtgacggccaccgggcggaaaaAGCTGGACGACCTTAACCACCCGGTCACGGATCGGTCCGAGTTCTACGGTATGAGCGACCTGATGAAGCCACCGGTCCTGTTTTCGCCGTCGGAGGATATCGACAAGCTAACGTCCATGGATTTGCAGTTCTACGGGCACGACGCGGACTCCCTTTCCGGCACCAGCGACAACGTCAAGTCACCGTTCCTGCTGCACGCCAACAAGCCGGCCACGCCGACGCTGAAGTTCCACAACCACTTCCCACCGGACGTACCGACTGACAAGAAGGATCCGAGCATCATCATGGACGGGACGATGGGAGCCGGCAACCCGATGGCCGAATTTGCGCCACAAATCAAGCGCCAGCGAATGTCGCCACCGCTCAGCGAGCGCGTCATGCTGTACGTGCGCCAGGACAACGAGGACGTCTACACGCCCCTGCACGTCGTCCCGCCGACCACGGTCGGGCTGCTGAACGCGattgaaaataaattcaaaatttcctCGTCGAGAATTAACACTATTTATCGCAAAAATAAGAAAGGGATTACGGCGAGAATTGACGATGACATGATCAGACACTACTGCAACGAGGACATCTTCATCCTGGAGGTGCAGCGGTACGAGGACGACCTGTACGACATCACACTAACGGAGCTGCCGACGCACTGA
Protein Sequence
MLSTTTRRRIQSTAAHPTDSPMSTDPSPVHGVTGTDGSNIIHLATGNGNNGTAQAITYARYYDQQASPLAPSTGSSGVMLGGGIGAGSNNGGHPVSSGSPVEQDPGGAISPTLNLIQHQHHHQQQQQQQHHQQHDHHTQNDPQQQQQIHQLHNNNGTFVYEYYKLPTDGKDGGLQWASNPSKLNGQTTPLDVDIQGLLLGAQSAISVKREPEDLRKEPKNPRSQKVSSSSSSSSSLPSPHVREPPPSPGSPSTETMYAAPGSTQIYLQGPSHQNSTAASASSNVNTNSPSPGSYAQYDMYPPNRLGPGGSAFITEPYTYREYFDNQGYAPARTIYGTATDSEGPQPATTYEGRFTKTGSIYTKTITSAGLTVDLPSPDSGIGADAITPRDQNNVQQSFDYAELCQAPTGLLDPNAAGHIPASVASLQRNLVVNGSQNSPTTSLGSSSAAAAAVATVAGAVVPPRSRPWHDFGRQNDADKVQIPKIYTDVGFKYYLESPSSSNQRREDDRITYINKGQFYGITLEYVHDPDKPLKNQTVKSVIMLLFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLAGCIEEVSHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHLQIDTFEDPRDTTVFHRGYCQIKVFCDKGAERKTRDEERRLTKRKMTATGRKKLDDLNHPVTDRSEFYGMSDLMKPPVLFSPSEDIDKLTSMDLQFYGHDADSLSGTSDNVKSPFLLHANKPATPTLKFHNHFPPDVPTDKKDPSIIMDGTMGAGNPMAEFAPQIKRQRMSPPLSERVMLYVRQDNEDVYTPLHVVPPTTVGLLNAIENKFKISSSRINTIYRKNKKGITARIDDDMIRHYCNEDIFILEVQRYEDDLYDITLTELPTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-