Basic Information

Gene Symbol
Ubp1
Assembly
GCA_943735745.2
Location
OX030927.2:40559991-40570047[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.58 2.8e+03 -3.0 0.2 88 98 225 235 189 265 0.55
2 3 3 1.4e+04 -5.7 2.5 97 99 350 352 336 375 0.42
3 3 3.9e-64 1.9e-60 203.6 0.0 18 221 494 708 480 710 0.92

Sequence Information

Coding Sequence
ATGGCGACGGCCGTATCTCTGTTGGCCAAACTACACAGCAGTGCCTTTGACCAGAcacagcatcaccatcaccacaagCACTTTCCACCGTGCGGccaaccgggaccggaagtggccgttCTGCACCGTACGATCCTCGGTAGCCGGCAACGGGGAGACCAGCACCTGGAGCAACAGCTGCacgtacagcagcagcatcagcagcaacagcaacagcagcttcagcagccCAATCCGCTCGAAGCATTGGATTTCCATCTGCTGTGCCGCTCGTTCGAGGAAGAGTTCGAACAAATGGAATTTTCCGGTGACGCCAGCACGTACCaatatcagcagcagcagcaacagcaacagcaacaaggtTCACCACAACAACTGCCGGCGGTGCAGCCCAGCAGACGGCAGCAAGATTTCGAACAGATCACTTCCGGTTACAACCTGGATAACGAGGACACGTACAGCGGTTCGCCGAACAACTTCCAGGAGTATCAGAACAACTTTGTCGACTCCCCACCGGATTCGAAGGAGTCGTGGTCGGTGGACTACAACAAAATGCACACCGCGATCACCGCGTCGACCAGCGCCAGTAACGATACAACCAACTCATCGGCCACGGTCACTGCGGTTGCGGTCACAACCGCTGCCGTAGCGGTCGCAACTGTTGCCGCTtctcaacagcagcagcagcagcagcagcagaaccaacagcaacaacagcagccgcagcagcagccagacgCGGCTGCCACCTACATTAGCAACGCAATCCTGCCGAGTCGCAAGCGACGTATGGAGTGGCTGTCCCCGCAGGAGGAGGATACCGATGGTACCGATACGAAGATCGCCAATATCGATAAGGAGCGTGACGCACGGCGCAAGGGAAGCATGCGTTGGGCAGACGaactcgatctcgatctcaGCAACGAGCTGTCGAGCAACGGTTACATCAGTGATTCGTTGCTGAACTTTCCCGTGTTCAAACAGGAGCTCCCTTCACCGCCGCAAAAGccgcaacagcaacaacagcagcagcaccaacaacagcagcagcagcaacagcaacagcatcagcttcaacaacagcaacaagcacTACTGCAGCAGCACGGAGCAGGAACCACTGACCACTCACAGCActccacagcagcaccagcaggatTGCAGCAGCCGCTTGGTGCAGCAGGAAACGGTGGTGCCGCTGGAGTGAGCCCTGGCAATGGAGGCAATtctcaccagcagcagcagcagccacaacaacagcaacatcaccagcagcagccgcaggtGGCTCAAtttccgcagcagcagcaacaacaagcgGTACCAAATGCCCTCAACAGCGGGCAAGGATTGATAAGCAACCCTGCGATCGGTACTGGGCTCAGCACTCTGCAAACGTTTTTGCAAAATAACCGCCTTGATACGGACAACAATGGAGCTGTGCTGCAGATGAATCAGGATGGAACGCTAGGAGTAGCATCACGCGGCGAGAAAGCACACGACGATCACAATCGGTTCCAGTACGTACTGGCGGCGGCAACGTCGATAGCCACGAAGAACAATGAAGAATCTCTCACGTACCTTAACCAGGGTCAAAGTTACGAAATCAAGCTCAAGAAGCTCGGCGATCTGTCCCCGTTTCGGGGCAAGATTTTGAAAAGTATtataaaaatatgcttccacGAGCGCCGCCTGCAGTACATGGAGCGGGAGCAGATGCAACTTTGGCAGGTTTCCCGTCCAGGTGAACGAATTCTCGACGTCGACATTCCGCTGTCGTACGGGCTGCTGCAGGTACAACCCACAAACAATAATCTACTCAACACGATCGAGGTGTTCTGGGATCCGATGAAGGAGGTCGGCGTTTACGTAAAGGTGAACTGCATTTCGACGGAGTTTACACCGAAAAAGCACGGCGGTGAAAAGGGTGTTCCGTTTCGGATTCAGGTTGAAACCTATATCGATAACGGCGGGCTGCAGAACGGAGCAAGCAATGGTACCGCAGGAGACGATAAGGACACGGTACGACCGCTCCACGCCGCAGCTTGTCAGATAAAGGTGTTTAAACTGAAAGGAGCAGaccgcaaacacaaacaagaTCGGGAGAAAATACTCAAACGTCCCGCCACGGAGCAAGAAAAGTATCAACGAAGCTGCGATTGCACAATACTGTCGGACATTACGACCGATTCCGTGCTGCTCCCGCTTGGAGGAAGCTTCAGTCCCGACCAcATTAAGCGCAACGTATCTCCACTGTTGGGCGGAGGTCCGACATCGCCCGCACAGTACACGAAGCTGGAGACCATTATGTCGACCGTGCTGCAGTGCAACGGGAATGTTAATGTTGGTAGCAAACCAACGGCCACCATTGCGGCCGCAGTGGCTGCAGCCGTCCAGAGCAGCAACGCCAACAATCCGATCGGCATCAGCAACGTTAGCTCGACGAACGGGCTCTGCAAACCCCTGATAGATCATCAGCAGGCCGTGCTGTCACCACAGCAACCTCCGAGCGAACTCGACGATTATGTGCCGTGCATTACGCGCGAAACTAGCCCCGGAGGCGTCGCGCAGTGGTTGGCCGTCCATCGCCTGTCGGCCTACGGGAAAATGTTTGCAcagttttccggttccgacaTACTGAGAATGTCGAAAGATGACCTATGCAAAATCTGCGGACTTGCGGATGGCATTAGAATGTTTAACATTCTTCATTCGAAGGCCATCACGCCGCGCCTCACGATCTACGTCAGCTTCGAGGCTAACATTTACCACGCGATCTATCTGCATCTGAACACGATCGCCGAGCTGGTGCAAAATCTGTCGAAAGTTCCCGGCTTCCTGGAGGCGATCAATGCTCTCAATACACCAAATTCTACGACGTCGGAGACCAGCGGTTGGAATGGCGGCTCGTTTGGTGGTATTCGGCccagtggtggcggtggagtcCTTAAGCTGGCCACTCAAAATGGTAATGGCCCGCATCAGTCGGTGCCTTCGCCCGCATCGCCGATCTCTTCGTCATCCTGTGGCCCCAAGCTGCAGTTGCTGATCAATGGGCCGAGCGGAATACAGGTTCTGCTCACGGAGGACGTGCTGAACAACGTGCGGGACGAGACGCTGTTTCAGCTTGAGCTGAAACCGAACGGCAATATTCTGATGAAAGCGGTCCACAGCCCAGGAGCACCCGGtgacggatcgatcgatgacgaCGGCAATTAA
Protein Sequence
MATAVSLLAKLHSSAFDQTQHHHHHKHFPPCGQPGPEVAVLHRTILGSRQRGDQHLEQQLHVQQQHQQQQQQQLQQPNPLEALDFHLLCRSFEEEFEQMEFSGDASTYQYQQQQQQQQQQGSPQQLPAVQPSRRQQDFEQITSGYNLDNEDTYSGSPNNFQEYQNNFVDSPPDSKESWSVDYNKMHTAITASTSASNDTTNSSATVTAVAVTTAAVAVATVAASQQQQQQQQQNQQQQQQPQQQPDAAATYISNAILPSRKRRMEWLSPQEEDTDGTDTKIANIDKERDARRKGSMRWADELDLDLSNELSSNGYISDSLLNFPVFKQELPSPPQKPQQQQQQQHQQQQQQQQQQHQLQQQQQALLQQHGAGTTDHSQHSTAAPAGLQQPLGAAGNGGAAGVSPGNGGNSHQQQQQPQQQQHHQQQPQVAQFPQQQQQQAVPNALNSGQGLISNPAIGTGLSTLQTFLQNNRLDTDNNGAVLQMNQDGTLGVASRGEKAHDDHNRFQYVLAAATSIATKNNEESLTYLNQGQSYEIKLKKLGDLSPFRGKILKSIIKICFHERRLQYMEREQMQLWQVSRPGERILDVDIPLSYGLLQVQPTNNNLLNTIEVFWDPMKEVGVYVKVNCISTEFTPKKHGGEKGVPFRIQVETYIDNGGLQNGASNGTAGDDKDTVRPLHAAACQIKVFKLKGADRKHKQDREKILKRPATEQEKYQRSCDCTILSDITTDSVLLPLGGSFSPDHIKRNVSPLLGGGPTSPAQYTKLETIMSTVLQCNGNVNVGSKPTATIAAAVAAAVQSSNANNPIGISNVSSTNGLCKPLIDHQQAVLSPQQPPSELDDYVPCITRETSPGGVAQWLAVHRLSAYGKMFAQFSGSDILRMSKDDLCKICGLADGIRMFNILHSKAITPRLTIYVSFEANIYHAIYLHLNTIAELVQNLSKVPGFLEAINALNTPNSTTSETSGWNGGSFGGIRPSGGGGVLKLATQNGNGPHQSVPSPASPISSSSCGPKLQLLINGPSGIQVLLTEDVLNNVRDETLFQLELKPNGNILMKAVHSPGAPGDGSIDDDGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00096834;
90% Identity
iTF_00096834;
80% Identity
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