Basic Information

Insect: Anopheles atroparvus
Gene Symbol: -
Assembly: GCA_015501955.1
Location: CALTRM010000022.1:187348-189485[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0074 0.58 9.4 1.3 2 23 230 252 229 253 0.95

2 9 0.15 12 5.3 0.5 1 23 285 307 285 307 0.82

3 9 0.00013 0.01 15.0 0.2 2 23 316 337 315 337 0.97

4 9 5.4e-05 0.0043 16.1 0.6 1 23 348 371 348 371 0.93

5 9 4.8e-08 3.8e-06 25.7 1.5 2 23 379 400 378 400 0.97

6 9 0.0053 0.41 9.9 5.4 2 23 408 429 408 429 0.98

7 9 0.04 3.1 7.1 2.7 1 23 434 457 434 457 0.97

8 9 9.3e-06 0.00073 18.5 2.2 1 20 463 482 463 485 0.94

9 9 9.8e-05 0.0077 15.3 3.5 1 23 491 514 491 514 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0074	0.58	9.4	1.3	2	23	230	252	229	253	0.95
2	9	0.15	12	5.3	0.5	1	23	285	307	285	307	0.82
3	9	0.00013	0.01	15.0	0.2	2	23	316	337	315	337	0.97
4	9	5.4e-05	0.0043	16.1	0.6	1	23	348	371	348	371	0.93
5	9	4.8e-08	3.8e-06	25.7	1.5	2	23	379	400	378	400	0.97
6	9	0.0053	0.41	9.9	5.4	2	23	408	429	408	429	0.98
7	9	0.04	3.1	7.1	2.7	1	23	434	457	434	457	0.97
8	9	9.3e-06	0.00073	18.5	2.2	1	20	463	482	463	485	0.94
9	9	9.8e-05	0.0077	15.3	3.5	1	23	491	514	491	514	0.98

Sequence Information

Coding Sequence: ATGGGTTTGGCGTTCATGAGCGCCCATTTGCATCTTCAGGTCAACGAAGACCAACAGCTCCCGAAACATATCTGCATTAGCTGCCTGGAGACGGTGGAGGCGTTCGACAAGTTTTACGTAAATGTGGCCCAGAATCAGTCGTTTCTCGTGCAAAATGAAGGAGCAACGGTTGGTATTCTGGTGCGGAATGACGAGTACGTGGAGCATGACAACGACATGACCTGCGAAGAAGTTGTACTAGGGAAGCCTATCGAATTGCACGGTAGTTATATGCTTCATTGTGCTGCAAAGGAAGATCCTCCTTCGAATCCTCCATCGTATGACGAGGTGCAGCAAAATAAACGTGCACAGTTGATCTCCAGCGTGGCAACCATTCAGCCTGCGGGTAAAACATTGGCGGAAGATGATTGCTTTATAGAAAAAGCCACCGTTGGACCGGAACCCAACGACGGAGAGGAAAGTAAAACACTACCGGAGGATGTGGTCATCGAAGAGGAGGCGAACGATGACGAGGACAATGTGTCGGAATGGGAAATCGACGGCAATGGTACTATTGCACCCACCGACGATGAAGCGGGCTTCCTCGTCAGGGTCAGCAAATTCAAATACCCTAGAATGATACGAGATGGGAAGCTGATTGTGAGGGGCGAGGAGCTTGATAAATGTCTCGAACAGTTTTACGGCCTCACTTGCGACGTATGCAAAGAGACGAGGTCTACAATAGAGACACTTTCCGAACATTACCGAAAGGTGCACCATGTGGAAGGCGGCTACGTGGTATGCTGCGGGCGGAAGATAGAAAAACGTTTGCTTATGGCAATGCACATGGCGAAGCACTTAGAACCCGAAGCGTTTGAGTGTCCAGTCTGCAAGAAAATGATGACCTCCCCGCGGATCCTACGGTTTCATATAAAAAATCATCTGCCGGAGGAAGAGCGGCCACTGAAGTGCGATCTTTGCCCGCGTCGTTTCAGCTACGTTAGTGGGTTGCTGACGCACGCGTCTACGCACCGAACCGAGAATAAATCGAATCAGGCGTACCACATTTGCGATACCTGTGGCCGAGCATATCGCACCCGAAGCAGACTGATGGACCATATTTTAGCATCGCACACCGGCCCCTCGCAATGCGTTCGGTGTGAGACTTGCGGTAAGCAGTTTTCCTCCAAGAGCAATCTGAACTACCACATGACCACGCACGAACCGAATTTGCACCAAGAACAGTGCGAACACTGCGGGAAGTGGTTAAAGAACAAGATCTGCCTGCGCAAGCACATGCAGCAGCACTCCGACCTGCGATACCAGTGCAGTTGTTGCGACTATTCGACCACCAACGGGCAGAGCATGCAGAGCCACCTTCGGGTGCAGCACTCCGACGAGAAGCCGCACGTGTGTCCGGAATGTGGCAAGGCTTTCAAGCTGCGATGCAACCTGCGCAGTCACATGCCGCAGCATACGGGCGAGCGCAATTTTAAGTGCGAGTTTTGCTCGCGTCAGTTTGTGTCGAACAGCAACTACTACAGCCACCGGAAGCGAATACATTTCGAGGAAATGGAGCTGAAAAAGAGACAGAAAGAACTGAAAGAAAGGGAGACTCGTATTAAATTGAAGAAACAATAA
Protein Sequence: MGLAFMSAHLHLQVNEDQQLPKHICISCLETVEAFDKFYVNVAQNQSFLVQNEGATVGILVRNDEYVEHDNDMTCEEVVLGKPIELHGSYMLHCAAKEDPPSNPPSYDEVQQNKRAQLISSVATIQPAGKTLAEDDCFIEKATVGPEPNDGEESKTLPEDVVIEEEANDDEDNVSEWEIDGNGTIAPTDDEAGFLVRVSKFKYPRMIRDGKLIVRGEELDKCLEQFYGLTCDVCKETRSTIETLSEHYRKVHHVEGGYVVCCGRKIEKRLLMAMHMAKHLEPEAFECPVCKKMMTSPRILRFHIKNHLPEEERPLKCDLCPRRFSYVSGLLTHASTHRTENKSNQAYHICDTCGRAYRTRSRLMDHILASHTGPSQCVRCETCGKQFSSKSNLNYHMTTHEPNLHQEQCEHCGKWLKNKICLRKHMQQHSDLRYQCSCCDYSTTNGQSMQSHLRVQHSDEKPHVCPECGKAFKLRCNLRSHMPQHTGERNFKCEFCSRQFVSNSNYYSHRKRIHFEEMELKKRQKELKERETRIKLKKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -