Basic Information

Gene Symbol
V-MYB
Assembly
GCA_015501955.1
Location
CALTRM010000205.1:9717-13074[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.088 75 2.2 0.0 22 46 227 257 219 257 0.77
2 5 4.1e-11 3.5e-08 32.1 0.0 1 45 263 307 263 308 0.90
3 5 5e-11 4.2e-08 31.8 0.1 1 44 316 363 316 365 0.90
4 5 1.8e-09 1.5e-06 26.8 0.0 3 46 373 417 371 417 0.93
5 5 1e-08 9e-06 24.4 0.2 4 44 426 473 423 475 0.88

Sequence Information

Coding Sequence
ATGTCTAATTTTAGCTCCGATTGTGATAGCTCCTTCGCTACGGAGTCCGAGGCCGACAATGAATATTTCTGGAATGAGGAATCCATGAAAAACAATGTTTGTCTGCCGAACTACACCACAGAGGTGGAGAACATCATCCGGGAAAATGTTGATGTCACCACGGCGAACGCGATCGAGCTTAACCATCATTATCGAGCCAAGTTACGACTGCTTCGCACGCAACTGGAAACACTGCTCGGTCAGTGCCAAGCGCGGCTGAAAGATGTGGACGGTATGGTGGATAATTTACGCCACAATCGGAAGGACGGTATACCCTACCGGGTGCGCACTCCGGGATACATCTGTGGGCAGCCGTTTTTTAAGGACCATGAGCTGTACCCTGGACCGCACAACGCGGACTACCTGTACCGTAAGAACGTGAAGAAGGAGTTTTTCCCCCTGGACATGTTCGAGGTGGCTGAAACCCACTGGACACCCAAGGACAAGCTGGGTATGAAGAATGGCATTTGGCTGCAGGCGCTCGAGTTCCTTCGGCGAGAAGGTGCGCTGCGTCTGAAGATGTGCAGCAACCCGGTGAAAGCCGAACGCATAAGGCAAGACATTGCGTCTTACAAAACGCTCGCCCTAGAAGCAATCTGGTCGAGGGTGCAAGCGTACGAGGCCGAATATGGGGGCGAAAGGTTCAAGGTGGACTGGTTGGTGATATCGAACGTCAACGTACTGGGCCGGCATACCGCCGCGGCATGTGAAGCCATGTGGAACCAGTACCTCAGGCCGGAACTTAAAAAAGGCTCCTGGCATGCAGAAGAAGACAGTCTGCTGGCGGCAGTGCGCATTCACAACTGTCAAGATTGGAGCAGCATTGCCCAGTCGGTGGGCAATCGATCCGAGTATCAATGTTTTGTGCACTTTCGCTCCTACTTTTCGCAGCAGGCGCAGATAGAAAGGAAACCATGGACACCGGAGGAGGACGCACGGTTGCTACGAGTGGTTCAGGAGAACCGCATGGGCAGCAACGTCGTCTGGAACAAAGTGGTAGAGAACATGCCTCTCCGCAACAAGATCCAGGTCTACCATCGCTACAAGTACACTCTGATGCGTCCGATGAAAGGAGCCAAGTTTACCGCAGAGGAGGACTGCATAATAACGGCTTATGTGCAGCAGTACGGGGACGATTTTAAATTTTTCCCCGAGCATCTGCTGCCGGGGCGGACGATGAAGCAGGTCTGGGCACGGTACAACAACACGCTGCGGTTCGTTGATAAGCGCGCCGGCTGGAGCCTGGAGGAAGACAAACGCTTGATGAGCTACATCGCAGAACATCTGACGGAGGAAGGTCCTGAAAAGATCTCCTGGTCCGACTGCTCGAGGCACCTGTCCAATCATTCGCGGGCCAGCTGTCGGtcgcggtactacacgatcgaaaagtttctcgaaaaacaccccaacgctacgctggaggacgtACCGAGGCGGGAAAGGAAAAAGCTTTCCACCGATGTAACGCATGAGAATTGGATTAAAACCATCATTGATATAAGAAGCACACCGAATGAAGATCGGGACCGCTCCCCCACCGAAGATAAACTGTGCCAGAGCTTCAATACCGTCGGCGAGTTGGGATTGTATGAGCAAATGAAATTTTGCTTCCGGTACCAGTTTGGCCACAAGTTGTCGCTCGAAGTGGATCGGCGCCACGTGCACACGGGTACAAAGATTCTAATGCACCTGCTGGAAGGCTTCCACGAGTCGGATTTAGTCTCCAACACTTACTTTTTAGCTAAGGTGGACCGTTCGATGATGATCGCCGCCATGCAGGCACCCCTGGATTGGACAAGTGTGACGGGCGCCCTACGCCCCAAGAAAACCCCCGATGGCGATGCAAT
Protein Sequence
MSNFSSDCDSSFATESEADNEYFWNEESMKNNVCLPNYTTEVENIIRENVDVTTANAIELNHHYRAKLRLLRTQLETLLGQCQARLKDVDGMVDNLRHNRKDGIPYRVRTPGYICGQPFFKDHELYPGPHNADYLYRKNVKKEFFPLDMFEVAETHWTPKDKLGMKNGIWLQALEFLRREGALRLKMCSNPVKAERIRQDIASYKTLALEAIWSRVQAYEAEYGGERFKVDWLVISNVNVLGRHTAAACEAMWNQYLRPELKKGSWHAEEDSLLAAVRIHNCQDWSSIAQSVGNRSEYQCFVHFRSYFSQQAQIERKPWTPEEDARLLRVVQENRMGSNVVWNKVVENMPLRNKIQVYHRYKYTLMRPMKGAKFTAEEDCIITAYVQQYGDDFKFFPEHLLPGRTMKQVWARYNNTLRFVDKRAGWSLEEDKRLMSYIAEHLTEEGPEKISWSDCSRHLSNHSRASCRSRYYTIEKFLEKHPNATLEDVPRRERKKLSTDVTHENWIKTIIDIRSTPNEDRDRSPTEDKLCQSFNTVGELGLYEQMKFCFRYQFGHKLSLEVDRRHVHTGTKILMHLLEGFHESDLVSNTYFLAKVDRSMMIAAMQAPLDWTSVTGALRPKKTPDGDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00093986;
90% Identity
iTF_00093986;
80% Identity
-