Basic Information

Gene Symbol
Gata5
Assembly
GCA_016920715.1
Location
NC:17715453-17731006[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-14 3.1e-11 42.1 2.3 1 32 573 603 573 605 0.97
2 2 1.9e-18 4.6e-15 54.4 6.1 1 35 636 669 636 670 0.97

Sequence Information

Coding Sequence
ATGGCCGTTTCATCCGATTCAAAGTGTGTCGGAGTGGCGGTGAGTTGTCCCCAGTCCGGTCCGGTACCGAGCACGGCCGTCACTAGTGTGTCCGCGTCTACGACTACGGTCGGCGGCGCGATGGTTTCCGGTGGCCCGGTGGCGATGGTCGATCCCGCTGCACCTTCGGCACCACCGCTAAACGAACCGGCCGATGATGCTGCTACGAAGATGGAAGCGACGAACGAGCCCAAGGGAGAGGACCAGACGCCCAGTTCGGAAGTGACGTCCAGCGTGCATCAGCCAGTTGCTCATCAGCCGGTAAGCGTGTCACAAGCATCGCATACCCTCACCGACGTACCGGTGGATGGGATGATTGTGAACTCGGAACTACACACGGAACGCAGCTCGCCCGGCCAGCAGACGGCGGTGATCATCAACCAGCACAAGCAGCGCATGATCACGACCACGGGCCAGATAAGGGAAATCACAGAAGGACAGGAACCACCGAACGAGTCATCGGATTACGATGCGGTCGAGTACCATCACCAATCGGTACAATCGGCGGGTGGTGTGGAGCAGCACGGGTATAGCTACGAGCCGACGCATACCACCAGCCAGGAGCATCAGCAGGGTGTGGTGGTAAGCTCGGCCGCTACTGCGGTTCAAGCCTCAAGCGTACAGGTCGTCAAGCGGGAGATGATCGAAAAGGAAGCGGCTTTAGCGGCggccacagcagcagccaacaacaataacaacaacccGCCAGAAACTACCATCATACCGGTGCAGACGCAAACCATCTTCGTGGAGTACAAGAACGACGGCGAGGAACCGGTGCGGTACGTGAACCGGTACGAGGACGTCAAGTACCATCCGCACTCGCGGTACATCTATCAGCAGCCGCCCGGCGGACTGCCACTCTCGTCAACTCTACATTCCTCCGGCTCGGGACATCCGCACGTGTCGCACCATCCGCACCAtgcccaccatcaccatcatccgcACCACGGCCATGGGATGGTGCCGGGACATCAAACCCATCACCACGTACACGCACAGTCGGCACAGGTACATCAGACGATAGAAGCGGTTTCCCAGCATCCGTCGAGTGTCGCGGTGGCCACCCAGTCCGGCACGACGATTCAGGTGCAGGCCCAGCCGCACCAGCAAACCATACAGGTGTACGAAACGCACGAGCCCGGCTCCGGACCGGGCGGTGAGCAGGTGCAGCAGGTCGCCGAAGGGACGGTCGATGCGAAGACGCACTACACCAACCTGGAACCGGTGCACACGCTCGCCTCGCCCCAGAACTACTACATCGCGTCGGACGGGTACGCGACCGGCAACTACACCACGTTTCTGCCCCAGAAAGAGACGATCTACTACCATTCGCCGAGCCCGAACCCGGTCCTGTACAAGGGCGATCCGACGCTTacctcctcgtcgatcatcaCCAAGCAGATACACTACACGCCGTCGCTGCCGGGCACGCAGAACATGTACGAAAATGCGACCGGGCACAGCAGTAGCTCGCCCGGTGCGCAACAGATCTATCCGGGCTACTGGAATGGAGCGGGCGTAGACTACAACACTAACTTTACCGGCACGATCGTGATGGACAATGCGGGCGGCAACGTGGGCGAGTACGCGACGAACGGGCAGCATAGCTGGCAGATCAGCTCGCTGAACGATGCGTACGATCCGCAGCTGGCAGCGCCACCGGAACACCGTGAATGCGTCAACTGTGGCAGCTCCGACACACCGCTCTGGCGGCGGGACATCGTCGGTCACACGCTGTGCAATGCGTGCGCGCTGTACACGAGACAGAATCCGGGCACGAACCGACCGCCCAACCGGTCGCAGAAAGCCAAACAAACTGTGAAAACACCACCCGCCCAAGGGAACCGCCGTTCGGGCGTGACCTGtgccaactgtcaaaccacCACGACCACGCTGTGGCGCCGGAACAATCAGGGCGATCCGGTGTGCAATGCGTGCGGGCTGTACTACAAACTGCACAGCGTCAACCGCCCGCTCACGATGAAGAAGGACGGCATCCAGACGCGCAAGCGCAAACCAAAATCTAGTCAACAGATTCAACCGATGAACGGGCTTACGACGGGCAAGCTACTACCTTCGATGATACCGTCCCAGTATCACACGATCGCGACCGAACCAAAGCTAATGAATGCGCCTCAGTCCCATCTGGTGCAGACATCCCAGCCGATGGAGCTGCACAACAGCTCGCCGGGACAGGACCCGCGGTACGTGGACAGCTCACCCGGAGCACCCGGTGGAGGCGGTGgcagtggtagtggtggtggtggtggtggtggtggtggtaactCGTCCCCGCATCTTGCGCCCGTTCAGGGTAATCTAGCACGCCACATACCAATATCTGTACCAGTGTCGATGGATAGCAGCCGTGGTGCGAATGGAGAGATTACGAGCGTCATTACCAGTACGGCGGTGGCCGAGCGGTCGGGAAATTAG
Protein Sequence
MAVSSDSKCVGVAVSCPQSGPVPSTAVTSVSASTTTVGGAMVSGGPVAMVDPAAPSAPPLNEPADDAATKMEATNEPKGEDQTPSSEVTSSVHQPVAHQPVSVSQASHTLTDVPVDGMIVNSELHTERSSPGQQTAVIINQHKQRMITTTGQIREITEGQEPPNESSDYDAVEYHHQSVQSAGGVEQHGYSYEPTHTTSQEHQQGVVVSSAATAVQASSVQVVKREMIEKEAALAAATAAANNNNNNPPETTIIPVQTQTIFVEYKNDGEEPVRYVNRYEDVKYHPHSRYIYQQPPGGLPLSSTLHSSGSGHPHVSHHPHHAHHHHHPHHGHGMVPGHQTHHHVHAQSAQVHQTIEAVSQHPSSVAVATQSGTTIQVQAQPHQQTIQVYETHEPGSGPGGEQVQQVAEGTVDAKTHYTNLEPVHTLASPQNYYIASDGYATGNYTTFLPQKETIYYHSPSPNPVLYKGDPTLTSSSIITKQIHYTPSLPGTQNMYENATGHSSSSPGAQQIYPGYWNGAGVDYNTNFTGTIVMDNAGGNVGEYATNGQHSWQISSLNDAYDPQLAAPPEHRECVNCGSSDTPLWRRDIVGHTLCNACALYTRQNPGTNRPPNRSQKAKQTVKTPPAQGNRRSGVTCANCQTTTTTLWRRNNQGDPVCNACGLYYKLHSVNRPLTMKKDGIQTRKRKPKSSQQIQPMNGLTTGKLLPSMIPSQYHTIATEPKLMNAPQSHLVQTSQPMELHNSSPGQDPRYVDSSPGAPGGGGGSGSGGGGGGGGGNSSPHLAPVQGNLARHIPISVPVSMDSSRGANGEITSVITSTAVAERSGN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2