Aara004988.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- grn
- Assembly
- GCA_016920715.1
- Location
- NC:50149816-50247164[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 3.3e-16 58.1 4.7 1 35 338 371 338 372 0.98 2 2 4.8e-18 1.2e-14 53.1 6.9 1 35 397 430 397 431 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACGTCGGCAGCCGAGGCACGCAGCTGGTACGATAACCAGCGGCTCGGTGGATCACCGGGTACATCGGCCGCCCTGGGCCATCAGACGGCTGCGGTCGATCCGTCCGAGATGAACCCATTCTACCCGCTGGAAAATGGCTCCCATCGACGCTACTACCCAACAAGCTACGGACCACACGCATCCCGCATGACCTCGTCGCACGTGTCACCACAAGTCTGCCGGCCACACTTTCACGGACCACTGTCCTGGTTGAGCGACCCGCCCAAACCGATCGCGTCCAGCAGTGCGTGGGGAAGCCCGTTCGCCTGCCCGCAGGACCCACAGGACAAGCTGTCCCAGGTGCAGACGGGCCAGACCGGCCAGCACCTGTTCTCGTTTCCACCCACCCCGCCGAAGGACTCGACGCCCGACTCGGTGCAGACGGCACCGGCCGAGTATCAGGCGACGATCAACGCGTTCATGCACCAGGCCCAGGTCGGCTCGAGCAATGCggtcggcggtggtggcgtggGCGGAGGGGTCGGTGGTGGCGGTACCGGTCAGACGGCGGACAGCTGCGGGCTGGACGTGAAACCCTGCCTCACCGGGGGCAACGGATCGAGCGGTAGTGGCGGTGGCGGAAGTGGCGGAGGCCAGAACCAACCAAAGCAGCGCGAAGGTACGGGCAACAGCGGGACGGTGGGCAACGGTAGCAGCGGTGGGCCCGGTAGCCATACCAATGGCGGTCAGCCGACCGGAAGTGGGCTCGGCGGTGTGCACGGCGGTGGCCAGAGTGGAGCGGGAGCCGTCGCCACCGCTGGCGGCCACAGTtctggcggtggcggtgggctGTTCGATGGGTCGGGCCAGTCGGCGTACGGGGGGTACGATACGAGCGGGTAcggctaccaccaccagcatgcCGCTGCCTCGTTCGGACAGTCTAACCCGCGCCCCGCCATGAACAGCCCGCACATGAAGCCGCAGCGGACGAAAGCGCGCACGAGTGCCGAGGGACGAGAGTGTGTCAACTGTGGTGCAACGTCGACGCCGCTGTGGCGACGGGACGGCACTGGCCACTATCTGTGCAATGCCTGCGGACTTTACTACAAAATGAACGGCCAGAATCGTCCACTGATCAAACCGAAACGAAGACTGGTTAGCTCGCTTCAAAGTGCCGCCCGACGTGCGGGAACATCGTGCGCCAACTGCaaaacgaccaccaccaccctgtgGCGAAGGAATCAGGGCGGCGAACCAGTTTGCAACGCTTGCGGGCTCTACTACAAGCTGCACAACGTAAATCGACCGCTGACGATGAAAAAGGAAGGCATCCAGACGCGAAATCGGAAGCTCTCGTCCAAatcgaagaaaaagaaaggaatcCCTGGCTCGTGTCTTCCGCTCGGCGGTCACCTTGGAGATCTGATGAAGCCGCTCGACCATAAACCCTCCTTCCCCGGTGCGTTCCCAGGTTCAATGGGGCAACACAGCCACTTATCGGGAGGATTACACCCAGCACATACGCACATGCACGGTGGGTGGTATACGACTGGCATGGGAGCGCTCGGAACTTCCGGCGGACTGCAGAACGGATTCGGCGGTGCTGGGTCGTTAGGTGGAGGAGTCGTCCCGCATTCGCAATCGTACCATCTAGGACTTAATTCAATGAGCTGGCGTTCGGAGTACACGTGA
- Protein Sequence
- MDMTSAAEARSWYDNQRLGGSPGTSAALGHQTAAVDPSEMNPFYPLENGSHRRYYPTSYGPHASRMTSSHVSPQVCRPHFHGPLSWLSDPPKPIASSSAWGSPFACPQDPQDKLSQVQTGQTGQHLFSFPPTPPKDSTPDSVQTAPAEYQATINAFMHQAQVGSSNAVGGGGVGGGVGGGGTGQTADSCGLDVKPCLTGGNGSSGSGGGGSGGGQNQPKQREGTGNSGTVGNGSSGGPGSHTNGGQPTGSGLGGVHGGGQSGAGAVATAGGHSSGGGGGLFDGSGQSAYGGYDTSGYGYHHQHAAASFGQSNPRPAMNSPHMKPQRTKARTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLVSSLQSAARRAGTSCANCKTTTTTLWRRNQGGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGIPGSCLPLGGHLGDLMKPLDHKPSFPGAFPGSMGQHSHLSGGLHPAHTHMHGGWYTTGMGALGTSGGLQNGFGGAGSLGGGVVPHSQSYHLGLNSMSWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00097453;
- 90% Identity
- iTF_00102069;
- 80% Identity
- -