Basic Information

Insect: Anopheles arabiensis
Gene Symbol: -
Assembly: GCA_016920715.1
Location: NC:73582043-73595041[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0093 0.44 10.6 3.7 1 23 359 381 359 381 0.95

2 14 0.00011 0.0054 16.6 2.4 1 23 412 434 412 434 0.95

3 14 1.5e-05 0.00073 19.3 1.3 1 23 452 476 452 476 0.92

4 14 0.0087 0.42 10.7 1.4 2 23 482 504 481 505 0.94

5 14 0.0028 0.14 12.2 0.2 1 23 530 553 530 553 0.96

6 14 0.016 0.75 9.9 3.2 1 20 560 579 560 582 0.94

7 14 2.3e-05 0.0011 18.8 4.1 1 23 588 613 588 614 0.97

8 14 3 1.4e+02 2.7 2.2 1 23 955 978 955 978 0.92

9 14 0.039 1.9 8.6 0.9 2 22 996 1016 995 1019 0.89

10 14 0.56 27 5.0 0.6 3 23 1026 1047 1024 1047 0.95

11 14 0.0043 0.21 11.6 0.4 1 23 1053 1075 1053 1075 0.97

12 14 0.14 6.9 6.8 0.2 3 23 1085 1106 1083 1106 0.95

13 14 0.014 0.66 10.0 3.7 1 20 1112 1131 1112 1134 0.95

14 14 5.5e-05 0.0026 17.6 0.1 1 23 1140 1165 1140 1165 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0093	0.44	10.6	3.7	1	23	359	381	359	381	0.95
2	14	0.00011	0.0054	16.6	2.4	1	23	412	434	412	434	0.95
3	14	1.5e-05	0.00073	19.3	1.3	1	23	452	476	452	476	0.92
4	14	0.0087	0.42	10.7	1.4	2	23	482	504	481	505	0.94
5	14	0.0028	0.14	12.2	0.2	1	23	530	553	530	553	0.96
6	14	0.016	0.75	9.9	3.2	1	20	560	579	560	582	0.94
7	14	2.3e-05	0.0011	18.8	4.1	1	23	588	613	588	614	0.97
8	14	3	1.4e+02	2.7	2.2	1	23	955	978	955	978	0.92
9	14	0.039	1.9	8.6	0.9	2	22	996	1016	995	1019	0.89
10	14	0.56	27	5.0	0.6	3	23	1026	1047	1024	1047	0.95
11	14	0.0043	0.21	11.6	0.4	1	23	1053	1075	1053	1075	0.97
12	14	0.14	6.9	6.8	0.2	3	23	1085	1106	1083	1106	0.95
13	14	0.014	0.66	10.0	3.7	1	20	1112	1131	1112	1134	0.95
14	14	5.5e-05	0.0026	17.6	0.1	1	23	1140	1165	1140	1165	0.97

Sequence Information

Coding Sequence: ATGGAAGTGAAAATGCAGCACCGGACACGGGCACATGCGTTCCAGATACAGGTCAAAGCGCTGATCAAAACGCTGAAATGTCTACAGTCGGACGATAAATACCAGGCGCTGCTGTTTCTCATCTCGGCCATCAAGCTGTACGTCAAGTTCCTGTACAACGATTGCCAGGAGCGTCTCTACAAACCAGCAATACTCAAAGAGTTGAACAATATCGAAAATGTGATTGTGGTGAACCTGCTGAAGACGCGCAGCGCGCCAGCGTCCGGCTCGTCCCTGTCGGTCGCCACCGGCCACACGACCGTGTCCTCGTTTGGTGGCGACATCGCGGGCAAGGCCGGTCTCGACATCGACACCAGCACCAGCGTCCGCTGCACGGATCTGTCGCTCGGTAGCGatggtttgttgttgatgcacCCGCACCGCACCCGCGAACCGCCGCTAGCCCCCTGGGACCTTCGGGGGAAGCTACTGCGGGGCAACCTGTTCGACGGTCTGCCACTGACCGGCAGCGTGCGGCTAGGGCCAGAGTACAGCAGCAGAGGTGGAACGTTGCTCAAGGCGGGACAGCGAGCGGGGGGTGCAAATCGGTGGCTGGGGAACGTGCGGATGAATCGTGCGCTGGTTCGTATGATCGCCAATCACGATTTTAAGCTACTGTTCAACATGTTCGAGCAAAGCATCTTTCCTGCGTGGAAAATCTACAAAAATGAGCGAATATTTGTACGGAAACGGCCCGCCCTAACGACGGTCACGGTGCGCACCTCCCTTCCCGCCATTTGCTACGGAAGCGGTTCGTCCCACTCGCCACCTGCCACGTACATCAAGAAGGAGGAGTTCGACTTCGACACGCCGTACTCGATCGCAGACGATCACTGCTTCGAGGAGATCaaggacgaggacgacgaggaccTTCTGCTGATGAAGGAAGACGACTCGATAGACAATTCGAACGAAATCTTCTCGGAGGAGGAATCGTCCACCAACAACACCTCGCTGATGCTGTCGTCCGACACCAACACGCTGGACACGAACGATTCCAGCATGGTTTCGCACGAGCGCAACAAGGAACAGGTGTACCAGTGCTTACTTTGTGataaaagCTATAGGAAACGCAAATCTCTTGTCATCCACTTCAGCCACCATCCGGGATTTTGTCCCGATTGTGGCAAACAGCGAGGAGTAACCTCAGAGGAAATCGTTGAACACAATCGAATCTATCACAAAAACCGGCCTCACATATGTGAGCACTGCGGGGAAACCTTCACGCGAAATCAACAGTATCAGATACACGTCCAGGGTCATTTTATAAGCAAGGATAGGGTAGCGGAGCAAAACTGTAAAAAAACTCACAAGTACAGCTGTAAAACATGCGGTATCGTTTTTAACAATCAGAAATATCTCGAAAAGCACATCCAGAAAACCAACCACCAGGCGGAAGGTTTGGTGTGCGACATTTGTGGTGCAATATTTTGTAACAGTATCAAGCTCAGCCAGCACGTCAGCCGCACCCATCACAACGTATTTACTCAGAAAGCTACATTAGAGAGAAGTTTGCTCCTGCAGGGAACGAGTGTTACGGACAAAGCCTTCACCTGTGAGCAGTGCGGAGCCTCCTTTCTGTCGCAGCCCTCCCTACGGGAGCACATCAAACTATCACATTCCGTTCCGGAAAACAAATTCGAGTGCAATATCTGCAACAAGCTGTTCGCCGCCAAAAGGTCTCTCAAACGCCATAAACTTTGCCATTCGGATGAGCGCGCCTTCCGCTGTACGGTGGAAAACTGCAAGGAATCGTACAAAAACCAATCGCACCTTGCCCGCCACATGAAGACCGCCCATCACATCGATCCGCCGTCGAAGCGACTGCAGAAAGCGAAagcggctgcggcggcggcagcggctgcCGCAGCTGGGGCGGGCACAAGCACGGCCACTGCCTCATCGGCCGATCCCAGCTCGGCCAGCACGGACTTCATCACGCACGGTGACGTTGCGACGATGGGTGGCGGCTCGTGCGATTCGCTGAAGGGTATGGGCAGCAGCACGTTGAAAAAATCGCTCGGAAGCAGCGAAAAGTCGCTCGGCGACAGTAGCACCAACTTTAGCGACAATTTGTCGTCGTTTAATTACGAGTTTTCCGACACGACCGCAGGAACGTCGACGCCGGCGCTGGCAGCAGCGATGGGTACGGCGGGCAGTGACGGTAGCGTGCCGGGCGCGCTTACCCCTAGCAGTAGCGCCCTGGCGGGCCAGCGCCCATCCGCCCTAACCTGCTCCGTTACGGGCATACAGCAAAGCAGCGGTACGTTCAACGACCCTGCCATCAGCTTTGGTAcgaacaaacagcagcaatcgctgcagctgcaacaacagcagcaacaacagcagcagcagcaacaacagcagcaacagcaacaacaacagcagcaacagcagcagcaacaacagcaacaacagcaacagcaacaacagcagcaacaacaacagcaacaacaacagcaacaacagctacagctacaacagcaacagctacaacatcaacaacaaccacaacaccTCGGGGGTGGGTGGCAGAATCTCGAGTTTGGTGCAGGGACAGCGACGGCACACCGATCGGCAGCACTTCCCGGTAGTGTCGTTGGTGGTATGCAACCGTTACAGGATCCACTGGCGGCCACGACGGGTAGCTTTATGGACGGTGGACACCATCACCTGCAGAATCATCAGAACCTTCAACACCCCACAGCACACCATCACGGGCTTGGACCAATGGCAAATCCGATGGCCAGCACAGCGGGCAGCTTTATGGGCAGTGGCAGCTTAGCGGGCGGCACGAGGCGTTTCCCTCTGCCGGAGGGTAACTTTATGTGTGAGCACTGCGATGAAACCAACTTCATAAATGCACAACAGTACCATCTTCATGTGCAGGACCATTTTGCGGCCAAGGATGGTAAAGATCACCCGAGCAAAAAGCTGCTGCGGTTAAATTGTAAAACATGCAATCTGGTGTTCGCTACGGGAGCGCAGCTCGATCGGCACattcacaaaacaaaccatcacaCCGAAAGCATAGCGTGTGAAATATGTAGTGCAATATTCAACTCCAACCTAAAAGTTTACCAGCATATGCTGAAGTGTCACAAGAATGACGTTTGGTTTGCTTGTGAACAGTGCTCGAAGGTTTTCATATTGAAACAGGACTACGATAAGCATCAGCTGGTGCACCAGACGGTGACGGATCGGTCCATCATCTGTGAGCACTGCGCCTCGTCCTTCCTCACGCAGGAAGCACTAAAGGAACATATCAAAATAGCCCATTCGATGgacaaaaaatacaaatgtaaCATTTGCAACAAGCTCTTTGCTGCCCGTCGATCGCTCAAACGCCATAAACTGTGCCACGAAGAGGAGGCCGCTTTCCGATGCCCGATCGATGGTTGCAAGGAAGCATTCCGGACGGCGGCAAACCTGGCGAAGCACAAAAAGATGGCACACCCGGCCGGGCTGTCGACGGTTCCCGTACCTGTAGGCAATGTGTTGGCCCACGAGCCAATGGCGGATAAGGTCGTTGCCGGTATCGGTATGCCAGGCGGAGTCAAGCTGCTGCCGGGCACAATGGCGTCAGGAACGTCCAATGCTCCGGGTGGCTCCGGTGCGCTGAAAGGCATGGAGAAAGCAATGCACCATCCGGATCCACTGCCGGGTGTGACAATGCCGGCGGGAGGGCAGCCGAATGTGATGGGCCAGATGGGCGGCTCAAACCCGATGATGGCGATGGGAAATCCTGCAGCTGGGCTGAAAACAGACGGTCGATCATCCGCTGGCGGTATGATGGTGGTGCCTCCGTCGAGAACGAGCAGcgccggcagcagcacagGAATGAGTGGTATTAACAATGGTAGCGGTGGTGCTAATATACCTTACAATCCTTACGATGCTAGTGGATTGAACTACAACAGTGTGCTGGGACCGCCTGGTGCGGGTGTCGTCGCTTCCAGCGGCcctcatcatcctcatcatcatcaccatcagcatcatctccaacaacagcaacagcaacagcaacagcaacagcagcaacagcctaCACAGCAACAATCACAAGCTCAGCTAGTGCAACATCATTCACAAGCCCATGCTCACCACCATGCCGCTCAAGCTCAGTTTATCGGAATGGGCAATCCGGGCAGTTCTGCGGGGCTTCACTACAGTGGCCGCTCCGGCGGCACGGCATCGGCAGCCAACCCCGAACAACAGTCGGTGTCTATGGCATACCGAATGGGCGACACAGCAGTGCCAGGAACCAGCGGAACGGCAAGCGGCAGCGCAACCAACATTCCCTACGGCTATGGCCAGATGAATAATGCGTTCGATTGGCAGAGCATGGAGATGGGAACTCCGACCAATGCTGAACCAGGCCTAATAAGTGGGTCGGCAGGACAACCGCAGGCGGCATCTGGTAGCGGGACGATGAAAAGTGCTACCGCCAACAAATACTACAACGCAATGCATGAGCCTGGTTCGGCCGGAAGTCCAGGAGTGGGTGGTGGTAACACAACGGCTGGCTTCCTTTCACCCCAACAACTGCAGCACCAATCTCCCCATCATGCACAGCAGCATCTACAACATCAGCATGCACAACAGTCACAGcttcaacagcaacagcagcagcaacatcttCCTCATCATTCTCACCATGCGCAGGTTGCTGGGCTCCAAAATAAATCTGTGCAAGAACAACAcacccatcagcagcagcagcagcagcaacagcacatgATGAATATGAACAGCCAAGAAATGATGGGATATCAGGACATGTGGAATGCGAACATGATGAAGATGGAATTCCAAGACGAAGGAAGCGGTGCAAATACGGGCAACACTGTTGGTGCTTACAACAGTCTAGGGAACATTTTAAACAATCTAGAAATGATGGGCAGTAGCAACAGTAGCTTCGAACAACAGCAgacgcagcaacagcagtcgcaacagcagcagcagcagcagcaaggctATGAAATGGTTTCCACACCACGTACCAGTTCCGATACTCATCCACAATCGAGAGGGCAGTCTGCCCAATCGCCTGCGTTAACGTCACAGCAAGTACAACATCATCAgcaccatcaacagcagcagcagcagcagcagcaccaacaacagctacatcagcaacagcagcagccgcatgCGAAAGGAAACCATTTTCACAAACAGCAACATCCATCGCACAGTCACGCGCAGATGCTGCCGGGCGTAGAGCCAGGCCAAATGGTGaaccagcaccatcatcagcaacaccagcagcaacagcagcagcagcagcaatatttTCCAGATCATCACGGGGCACATCAGCAGGTACCACATTCTCATCATACCGGTACGATGGGCCATTCGATGGGAATCCCTCATGGCCATGGTCAGATGCAGCATAGCCATGGACATTCGGCACAGCAAACTCCCAGTCcgcatcatcctcatcatcagcaccacttgcagcagcagcagcagcagcaaatgcaacAACAGTACAACGCCCATCTACCACATCATCCCCAGATGATGCAACATCATCCACACGCACCCGGACCACCCGGGCAAGTGCCCAGTGgaagcggtggtggtggtggtggtggaagcagTTTGTCTGGCGGTGGTCCCACTCATATGGCACATCACAATCCAGCACATGCTGGCGTacccggccagcagcagcagcaacaacaacctccCCAACAGCCCGGTATGAGTTTTAATCCCTCCCAGAACGCAGCCGATCATGCCAATGCTGGTGCAAATCCTTCTGCGTTGCCCACGGATATCGCGAAAACGCCGAACAATCTACCCTTTGTCGACAGTTTCACGGAATCGATCGACTATCTGCAACAGTCCTTTCAGTACGTGTAA
Protein Sequence: MEVKMQHRTRAHAFQIQVKALIKTLKCLQSDDKYQALLFLISAIKLYVKFLYNDCQERLYKPAILKELNNIENVIVVNLLKTRSAPASGSSLSVATGHTTVSSFGGDIAGKAGLDIDTSTSVRCTDLSLGSDGLLLMHPHRTREPPLAPWDLRGKLLRGNLFDGLPLTGSVRLGPEYSSRGGTLLKAGQRAGGANRWLGNVRMNRALVRMIANHDFKLLFNMFEQSIFPAWKIYKNERIFVRKRPALTTVTVRTSLPAICYGSGSSHSPPATYIKKEEFDFDTPYSIADDHCFEEIKDEDDEDLLLMKEDDSIDNSNEIFSEEESSTNNTSLMLSSDTNTLDTNDSSMVSHERNKEQVYQCLLCDKSYRKRKSLVIHFSHHPGFCPDCGKQRGVTSEEIVEHNRIYHKNRPHICEHCGETFTRNQQYQIHVQGHFISKDRVAEQNCKKTHKYSCKTCGIVFNNQKYLEKHIQKTNHQAEGLVCDICGAIFCNSIKLSQHVSRTHHNVFTQKATLERSLLLQGTSVTDKAFTCEQCGASFLSQPSLREHIKLSHSVPENKFECNICNKLFAAKRSLKRHKLCHSDERAFRCTVENCKESYKNQSHLARHMKTAHHIDPPSKRLQKAKAAAAAAAAAAAGAGTSTATASSADPSSASTDFITHGDVATMGGGSCDSLKGMGSSTLKKSLGSSEKSLGDSSTNFSDNLSSFNYEFSDTTAGTSTPALAAAMGTAGSDGSVPGALTPSSSALAGQRPSALTCSVTGIQQSSGTFNDPAISFGTNKQQQSLQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQLQQQQLQHQQQPQHLGGGWQNLEFGAGTATAHRSAALPGSVVGGMQPLQDPLAATTGSFMDGGHHHLQNHQNLQHPTAHHHGLGPMANPMASTAGSFMGSGSLAGGTRRFPLPEGNFMCEHCDETNFINAQQYHLHVQDHFAAKDGKDHPSKKLLRLNCKTCNLVFATGAQLDRHIHKTNHHTESIACEICSAIFNSNLKVYQHMLKCHKNDVWFACEQCSKVFILKQDYDKHQLVHQTVTDRSIICEHCASSFLTQEALKEHIKIAHSMDKKYKCNICNKLFAARRSLKRHKLCHEEEAAFRCPIDGCKEAFRTAANLAKHKKMAHPAGLSTVPVPVGNVLAHEPMADKVVAGIGMPGGVKLLPGTMASGTSNAPGGSGALKGMEKAMHHPDPLPGVTMPAGGQPNVMGQMGGSNPMMAMGNPAAGLKTDGRSSAGGMMVVPPSRTSSAGSSTGMSGINNGSGGANIPYNPYDASGLNYNSVLGPPGAGVVASSGPHHPHHHHHQHHLQQQQQQQQQQQQQQPTQQQSQAQLVQHHSQAHAHHHAAQAQFIGMGNPGSSAGLHYSGRSGGTASAANPEQQSVSMAYRMGDTAVPGTSGTASGSATNIPYGYGQMNNAFDWQSMEMGTPTNAEPGLISGSAGQPQAASGSGTMKSATANKYYNAMHEPGSAGSPGVGGGNTTAGFLSPQQLQHQSPHHAQQHLQHQHAQQSQLQQQQQQQHLPHHSHHAQVAGLQNKSVQEQHTHQQQQQQQQHMMNMNSQEMMGYQDMWNANMMKMEFQDEGSGANTGNTVGAYNSLGNILNNLEMMGSSNSSFEQQQTQQQQSQQQQQQQQGYEMVSTPRTSSDTHPQSRGQSAQSPALTSQQVQHHQHHQQQQQQQQHQQQLHQQQQQPHAKGNHFHKQQHPSHSHAQMLPGVEPGQMVNQHHHQQHQQQQQQQQQYFPDHHGAHQQVPHSHHTGTMGHSMGIPHGHGQMQHSHGHSAQQTPSPHHPHHQHHLQQQQQQQMQQQYNAHLPHHPQMMQHHPHAPGPPGQVPSGSGGGGGGGSSLSGGGPTHMAHHNPAHAGVPGQQQQQQQPPQQPGMSFNPSQNAADHANAGANPSALPTDIAKTPNNLPFVDSFTESIDYLQQSFQYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00102591;
90% Identity: iTF_00102591;
80% Identity: -