Aara002044.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- Zfy2
- Assembly
- GCA_016920715.1
- Location
- NC:79263429-79266644[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.6 76 3.5 0.0 2 23 194 216 193 216 0.92 2 17 2.5 1.2e+02 2.9 0.6 6 23 225 242 225 242 0.96 3 17 2.8e-05 0.0014 18.5 0.6 2 23 247 269 246 269 0.96 4 17 2.4e-05 0.0012 18.7 0.5 1 23 277 299 277 299 0.98 5 17 0.00052 0.025 14.5 1.1 2 23 303 325 303 325 0.93 6 17 2.4e-05 0.0011 18.7 0.2 3 23 333 353 331 353 0.96 7 17 0.00018 0.0084 16.0 1.2 2 23 363 385 362 385 0.95 8 17 0.75 36 4.6 1.0 1 23 392 415 392 415 0.96 9 17 8.4e-06 0.0004 20.2 1.8 1 23 420 442 420 442 0.97 10 17 0.1 4.9 7.3 6.6 1 23 448 471 448 471 0.95 11 17 0.005 0.24 11.4 4.8 3 20 505 522 504 525 0.94 12 17 0.034 1.6 8.8 0.2 2 23 529 550 528 550 0.88 13 17 1.2e-05 0.00057 19.7 0.4 1 23 557 579 557 579 0.98 14 17 0.0011 0.051 13.5 2.8 3 21 590 608 588 611 0.93 15 17 0.0011 0.052 13.5 0.6 1 23 618 641 618 641 0.98 16 17 2.8e-05 0.0013 18.5 0.2 1 23 646 669 646 669 0.91 17 17 0.00062 0.03 14.3 1.9 1 23 675 698 675 698 0.97
Sequence Information
- Coding Sequence
- atgaatgaaaagtgTCGCCTGTGTTTGGAGGAAGTGCAGTGTGCCATTGCCGTCTCGATAGTGGACGAGTCGTTTCAGCAAAAGCTgcgaaatgtgtttttattcgaGATCTCGACGGAAGAGCCCTTACCGGAACAGGTATGCCAGCAGTGCCAAACGACAGTGGCCGAGTTTCACGTCTACAGCCAGCAGGTGGAGGCGAACCAGCGCCAGCTAAGGTTAGAGCTGGCGACGGACATGGATGTTGAGCCGGAACCGGTCAAGGTAGAGCCGACCCTTAAGATTGAAATCTTGCCAGCGGAAGGGCTGGAGGAGCTGCCGCCGGGCATTGAGTGTGTGGATGTGAAGGAAGAGTACGATGGAAGCATTACGGCccagtcggaatcggacttgGATGCGAGCACGGACGATGAGTACGTCGTGGCGACCCGGCGCAAGGTCCGTCGTAAAGCGCGCGAACGAAAGGAGCGAAAGGAGCGAAAGGAGGAGAGCGCAGAGCGGGGCAAAGACAAATCGGAAGGGAATGGGGCGGCCCGGCAGCAGGAGAAAGACGACCGGATCAAGGAGTTCTACACGCTGGAGTGCGAAATCTGCTCCATCCTGTTGGATGACTTTGTGCAGCTGCAGGAGCACTACCAGCTGGTGCACGACACCCGCGGCTATATACGGTGCTGCAACAAGCAGCTCTTCCATCGCTACACGCTGCTCGACCATATCGCGGTGCATCGGGGAACGATCCGGTGCGAGGTGTGCGACAGAACGTACAAAACGAAGCGCTACCTGGCGCTGCACATGGCCAAAAGCCACGGCACGGAGGAGGAGCGCCCGTTCAAGTGCGACCAGTGCGGGCTGGCCTATCCGAAGCAGTATCTGCTCCGGTCGCACCAGCTGATGCACGTGCAAGCGGAGTGCCACGTCTGCAAGAAGGTGCTGTCGAGCAATTACGCCCTCAAGGTGCACCTCACGCAGATGCACAGCGACGATGGGAACCAGATCTGTGCGACGTGCGGCAAAATTTTCCGCACCAAGGCGGCGATGGAGCGGCACATCAAGGAGCATATGGGGCTGGAGCCGATCGAGCGGATGCAGTGCGAGTACTGCCAGAAGTGGTTCAACGGGAAGTACAATCTGAACAAGCACATTCGCTTCCTGCACAACGAGCGGGGGCAGGTGTTTCGGTGCGATCTGTGTGCGCACGAGAGCCCGAACAGCCGGGCCCTGTCGTACCACAAGCAGCGGGTGCATGTGCAGGAAAAGCACGAGTGTGAGCTGTGCGGCAAGCGGTTCAAGCGGAAGCTGTATCTGCGCGAGCACATTGCGTCGCACACGAACGTGCCACTGTACACGTGCGAGTACTGCGGGATGAAATTTAACTCGCACGCGAACCATTTTACGCATCGGAAAAACAAGCACCCGGAGGAATGGGAAGCGCACAAGCGGATGCGGATGTTGAAGAAGATGAGGTGCGAAACTTTAACGCCTTTAGTGAAGCGAACGTTTAGTGAAGCGAACTGCCACCACTGTGAGCGAACGTTTCACACCCAGCGGCAGCTGAATCAGCACCTGCCCGCGCACGAAACGACGGTATGCAAGATCTGCGGCAAAACGGTGAACGTTCGGTACCTGAAGCAGCATACCGCACTGATACACGGCACGGTACGCCAGGGCTACATGTGCGATCTGTGCGGGAAGAACTTTTCCAGCAGCTTGGCGCTGGACCGGCACATCAAGCAGCACCAGGGCATCGAGACGATCGAGAAGCTAGACTGTCCGCATTGTGGCAAGCAGCTGAACGGGAAGTACAACCTGCAGAAGCATGTGCGCTGCATGCATGTGGAGGCGGGCAAGAGTTACCGGTGCGAGGTGTGCGGCCACTTCAGCCCGAACAGTGTGGCGCTGGAGAACCACAAAAAGCGGGTGCACACGGGCGAACACTTTGAGTGTGGGGAGTGTGACAAGCGGTTCAAGCAGAAGATTTACCTGACGGAGCACGTGGCGGCGCTGCACACGCGCAAACCGCTGTACGCGTGCGAGTTTTGCGAGGCTACGTTCAAGTCGAGGGCGAACTACTACACGCACCGGAAGACCCGGCACCGGGCAGAGTGGGAAGCGCTCAGGGAGGAGAGGAAACAAGGGGAGGGCAAGAGATTGTTTGCCGCGGCGGATGTGATCACTGGAGTCGTCTag
- Protein Sequence
- MNEKCRLCLEEVQCAIAVSIVDESFQQKLRNVFLFEISTEEPLPEQVCQQCQTTVAEFHVYSQQVEANQRQLRLELATDMDVEPEPVKVEPTLKIEILPAEGLEELPPGIECVDVKEEYDGSITAQSESDLDASTDDEYVVATRRKVRRKARERKERKERKEESAERGKDKSEGNGAARQQEKDDRIKEFYTLECEICSILLDDFVQLQEHYQLVHDTRGYIRCCNKQLFHRYTLLDHIAVHRGTIRCEVCDRTYKTKRYLALHMAKSHGTEEERPFKCDQCGLAYPKQYLLRSHQLMHVQAECHVCKKVLSSNYALKVHLTQMHSDDGNQICATCGKIFRTKAAMERHIKEHMGLEPIERMQCEYCQKWFNGKYNLNKHIRFLHNERGQVFRCDLCAHESPNSRALSYHKQRVHVQEKHECELCGKRFKRKLYLREHIASHTNVPLYTCEYCGMKFNSHANHFTHRKNKHPEEWEAHKRMRMLKKMRCETLTPLVKRTFSEANCHHCERTFHTQRQLNQHLPAHETTVCKICGKTVNVRYLKQHTALIHGTVRQGYMCDLCGKNFSSSLALDRHIKQHQGIETIEKLDCPHCGKQLNGKYNLQKHVRCMHVEAGKSYRCEVCGHFSPNSVALENHKKRVHTGEHFECGECDKRFKQKIYLTEHVAALHTRKPLYACEFCEATFKSRANYYTHRKTRHRAEWEALREERKQGEGKRLFAAADVITGVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -