Basic Information

Gene Symbol
RERE
Assembly
GCA_016920715.1
Location
NC:89314006-89422188[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.8e-08 1.6e-05 24.4 0.3 2 45 122 166 121 167 0.92

Sequence Information

Coding Sequence
ATGGCCACACCGCCAACCGAAGGAGAAATCAGAGTGGGTCCCGGCCATCAGGTAAACGATATCTATGCAACATTACCAGACTATCAACCGATCGAGAACTACCGCTCCGAGGACGATGAAGATCGCGACCTAGAGGATCCAAGATGGACACCCGGACTGTACATTGATAATGATTTGTTGATGTACCTGACCGCCGCTCGTTCAATATCCGCCTTTCAGGGTATGTGCGAGGAAGATGGTTGTATGGCAGCTAGTCGTGACGATACAACTATAAATGCATTTGATGTTTTACACGACTCAGGATACGACGCCGGCAAAGCCCTAGAAGCACTGCTAAAGTGTCCCGTGACGAAGGGCATCGAGAAGAAGTGGACCGAGGAGGAAACGAAACGCTTCATCAAGGGTTTGCGACAGTTTGGGAAGAATTTTTTTCGCATCCACAAAGACCTGTTACCACATCGGCCAACGCCGGAATTGGTAGAGTTTTACTATCTGTGGAAGAAGACGCCGGGGGCAAACCAGAACCGGCCCCACCGCAGACGACGGGCGAGCTCGCTCCGACGGCGCAACACACGGACGAACAGTAATGCGAGCGGCACCGCGCCGAACAgtagcggtagcagcagcagcagcagcaacagcaacagcaagaagGAACAGACCCCCGAGCGCACCGTGACGGATACCGGCTCGTCCCGACCGTCGCCGATCGGCAAGGAGGAGAACAGCTCCGTTACCGAGGACGACGTGAGCGAGTGCGACAGCGATTCGAGCGCCAACAAGGcgacggcagcggcggcggctgcagcgACAGCCACCGCCAACGGTACGGCCGGCGTTGGAGCTGGTAgcaacggcggcggcggaggaggcggtggcggtggaggaggaggcagcagtagtagcagcagcagcagtagcagcagcagcagcagcagtagtagcagcagcagtagcagcagcagtagcagtagtaacGGAAGTAACGGCGGCGTCGGCGGTTCCGTCGGCGTCGGAGACTTTACGACGACGGCCAGCAGCGGCGGCATTGGCGGGGGCACGGTCACCGGCGAGGAATCTCCGTCGAGGATGCGGACCCGCCAAAAGccaacgaaagaaacgaatgCAACCAATGCGAAGCGGCCCAAGCGGGGCGGTACGGAGACACCGGAGCAGCAGACAGCGACCGGCACTGCCGCAGCCGCAGCCACTGCTGGCGCCGCAGCCAcggcgggtggtggtggtggtgcgcccAACACCGGTGGTAGCAGTGGGAACGGGGCGGGCGGAAATCTGGACAGTCCAAAGACGCCCAGCAAAAcgacgaacagcagcagcaataataGCAGTAGCACCAACactaacaccaccaccaccacaggcACTGGCAATGGCGGGAACAGCAGCTCCTCGGGTGCAGTTGGCCCGACGGTGGACGGTGTCGGTGGCAAGCATGGCGGTTCGCAGACCGGCAGCAAAGGCAGCAAGTCCGCTGGTCCGGGCAAGACGGAAACGACCACTCCAAGCAAGGgcaagaagcgctcgaacgAGCAGGAGGTGGACGGAAGCGACGAGAAGGATGGGCAGAAGCGCAAACGCTCGGACAGCCCGGCCGAAAGCCTCACCACCGACAGCCGGCCCGGCTCCGTGCTGGACGAGATGGAATCGGTCAGCGAGGCGGCGACGGAAACGAGCATCGGTACGCGCACCACCGGCACGCCGACACCGGTCGGACACGAGCGGTTGCAGGGCGCCAACTCGGTCAGCTCCGGTACGGGCAGCAGCGCAGGAACCGCTGCCGACGGCAGCGTGCCATCCGCGAAGGACGACGAGAAGGATCCGCTGTCGCTCGGACCACCGCTCGCCGCCGAGCCGATGGTTACGGAGTCGAAcgaaaacagcagcagcagcaatacgACCACCTCGACCGTGGCCAAGTCCTCGTCGGGTGGTTCGGAAGACAAGGATGACGATTCGAACGCGGGTGCTACGGGTGCCGTTGTTGCGTCGGCGGTAGCAACCGTTCCAACGGCCGCAGACACCGCCAAGCTGCCCGAAACGGAAGACATCTCTCCGCCGTCGACGGCGGCCACTACGCCCGTCGCAACGCCGGCACCACCGACCGCGGGTGCATTGCTACCCGGCGCCGATGGCAGTGAACCGCCCCAGCAGGGAGTTGCTCCATCGTCGGAGGAAGCGGCCGCAGCAACCAACGGTACCAGTGTCAGCACAGCCGGcagcggcaccaccaccacggtggTTGAGGGTAAACCGTGCGTAAATGCGCTCGGACCCGCCCCGTCCAGCGACCAGGAGATGGCTTCGAAGCTGGCCAACATGAAACAGGAAGGTTCTGCCGCGACCGGACCTCCCACGGGCGCACCGGccggttcagcagcagcatcggtcGACTTTAACTCCAAAGACGTGTTCATCAAGAAGGAACCGAACGAAGAGTctggtgcagctgctgcggcggcggcatcGGCGGCCTCTGCCGGATCGTCCTCCGCGCCCGGAGAGCAATCTTCCGGCTCCGGTGTCGGTGGCGGCGCGGCCCCTACGAGTGGCGCCCCTAGCGAGCCACAGGATTTGAAGCTCAAGATTGAGGTCAAGTCGGAAGCGAAACTGATGCCGGGCGGAGGCGCCGGTAGCAACGAATCGTCCAGCCAAGGTGGCGCCGCCCAAGGCCCACCCGAGATGAAGTACGATCCGGAAAATCTCGTCATGAAACCGTACGAAAGTCACATCAAGTACGGTGGGCACCCGGGCGAGGACGGTATGAAGTACGGGGGGGAGCACAAGTATGGGCCACTGCCACCGCATCATCAACCCGGACCGGGCGAACCGCCGGGCCTGAAGTACGGTCCACCTGGGCCGCAGGACGAGCCGCTCGAGTACGATATGAAGCGGTACCCGGCGCACggtcctccaccaccacccaaccAGGATGGTGGTCCACTCCCGCTGAAGCTTGGCGGTGGTCCGCCCGGACCGCCGTCCGCTTCCGGAGCGCCGGGCGAACCACCATCCGCCGCAGGACCGCCGCCCCACATGAAGCTGTCCCAGTACGCGCAGGATCTGACGGGCCTGAACCTAAAGTACCCGCCGCCGGACGAGCGCAGCAAGTTTGCACCGTCGCCCGCCTCGGACAGTGGCAGCGGCAGTGGCGTAGCGCCTCCACCCCCGTCCGGTGTCGGTGGGCCGCTGCCGCTCATCCCCAAGAGCCACTATCCCGACCCGGCCCAGCTCAGCATGCTGCGGCAGCACTACGAGCACACGTTCAAGTACGATCCGATGGCGGCTGTCAAGTACGGACCGCCCGGGATGCCACCGTTCGGGGCGGGACCGCCCGGTCAGCACCACCATCCGCACCATCCGCTGGCGGGCGGCCTGCCCGGCCAGCCGCAGTCACAGCCGCAAGATCTGAAGTACCTGCCGCCGGAGGCCATGGGCCCGATGAAGTATCCACCCTCCTCGGTGGCGAGCGACACGCCCACCTCGCTCAAGAACAACAGCTTCTCGGCGGACAATCTGCTGaagagcagctcgtcgagcagcagcggcggcccGGGGGCGAACGATGCGTCCAACCCGCTGGACGTGTCGGCTTCGGGGCGCCACGCCATCACGCCCAACCAGGACAGCCagggcagcaacagcagctcccAGGCGACGCCCCTGCACGGCAGCAGTATTGCCTCGCCCCAGTCGGGTGGGCCTCCTCCCTCGCTACCACCGCACGGTGCTGGATCGTATCCACCGCCGCACGGACCGCCTCCCCCCGGCCATCCGGGACATATCGTGAATCCGGGGCTGATGCCAACGTTGCTCGGCGCCGGCCCGAACTCGTCGCCGGTACCACCAACGTCCCAGCCGGGAGGCGTGCATGTACCCCCCGTGCTTGGCGGTCACCCGTTGGCACATCCGGGCGGTGTCCCTCCACCGCAGCTGTTACCAACGCCGCCTGGTTCGGGCCCGTACCAGCCCAGCAATATGCACCGACCGGGCGGACCAATGCCACCCTCCTCGGTGCCGAGCTCGGTTTCGCTGGCCGTCTCGTCCAGCGGCAGCACTGCCCTCACCTCCACGACTgcatcatcctcctcctccacggCGGTAACGTCCCATTCCCCTGCCCCGATGCGGCCCTCCTCCGACAACGGACCGCTGGGGCTGCAGCCGATGGCGCACCATCACCGGTCGGACCGGGACCGCGAACCGCCCCGACCCGGCACAAACGAGCTGCCGCCAACCCGCGCCTCCCCCATCAACTCGCTGCTGCAGGGAGTGCCGCCACCGCATGGCATGCTGCCCCATCCACTGCCGCTGCACCTGGGTCATCCTGGCATGCAGCTACCTCCGCATCATCCGGCCCATCTGGCCGGCCCGCTGATGGGACACGCCGGGCTGCTGCCGCCCTCGCTGGCGGCACACAGCGCCGGCCTGCCGCTGCTCGGCGGGCCCACACCTTCCGCGCTCGGCAGCCTGATGGAGGTGGCGGGCGCCGGCCGCCGCTCACCTTCGTCCGGGCCGGGCAGCCTGGCCGGTGGTCCGCACGGCCACCTGCCGCCGACCTCGATGCACCAGTCGGTGAGTGCGCTGGCGGCACAGTCCCCGTCCACCCCGACCGGGGCCGGCGGTGGTGGACCACCGTCCTCGTCGTCATCCGCACTGAGCCGGGCCAGCCCGAACGTGCCGCCGGGCGGACCGGGAACCCCGGGTGGCGGTGGCTATCCGGGCCCGGGCGGCCATCATCACCGATCCAGCTCACCTGCCAACTCGAACAGCTCCGGCCTGAGCCGGGGCAGCCCGATGCACCTGAGCCACCACCCGTCGACGCCGGGTGCGGGCGGTGCGGGAGGCAGCGGCAGCTCGTccgcagcagcggcggccgccgcagccgccTCGGCCGAACGCGACCGCCAGATCATGCGCCAGCAGAGCCCCCACATgacaccgccgccaccgtctTCGTCCGCACCGTCGGCGGCGCTGATCTCCAGCCCGCTGAGCAAGATGTACGGTGGCCCCTCGGGACAGCGATCGCCGCCACCATCCCACCCGTTCCGACCGGGCGCATCGCCACCGGTCATACGACACCCCCAGATGCCTCTACCTCTGCCGATGACGGGCCCGATGGCGGGCATTCCCGGCTCGGTGATGCACGCCTCGCAGCCGTACCCGCTGATGCACCCGTCGCTGTTCAATCCGCACCATCACAACCCGTTCTACGCGCCGTACCCGTACGGTCCCGCCTACGGGCCCGGCTTCTCGTACATGAAGCCCGGCGGCTCACCCCTCGACAATCCGATGCTGCACGGGCACCCGACCGCGATACCGCCGCCCCGGCCCGAGGACGCGCCCGGGGCCGGCGGCCCCGGGGTGCACGGCAATGCGGGCGAAAAGTCGAAATCCTCCGGCGGTGGCAGCAAATCGCAGCAGCCGCaaacttcctcctcctccacctcgtCCGTATCGTCGCTGTCTGGGTCGGGCGGAAACGACCGTTCGAAGCAGTCGTCCTCCGGGTCTGGCAATGGAGGCGGCGGTGGTCCGGGCAGTGGCCATTCCAACTCGTCCAGCCAGAGCGGTTCGTCGGCCGGACCACCGGGTGGCCCCGGCCGGGGAGGCCCCTCGCCTAGTGGGGCGGGTGGTCCGGGGATGGTCGGCATGCCGGGCGGTCCGCCCGGTGGCCATCCGCTAAGCGGGAGCCCGTTCCATCCGGCCGGTCCACCCCATCACCACTCGCCATACGGTCCACCCCAGCCGCACAATCCGTTCATCGAGAACCAGCTGCCGCCGGTCGGTGGCGGCAAGCCGACCAGCCATATGGACGCGCTGCGAGCCCACGCCCATGCGGCGGCCGGTGGCGGGCTAGGTCCGCCGCCGGGCCATCACCCGCACCATCATCCGGGGCATgggccgccaccaccgcccgggCACCATCCGGCGCATCCGAGCGAACCGGTGCACATCGAAACGCTCGACATCGATCCGGATCCGGAACCACCGTCCCCTGTCCATGACATGAACCGGGGCCCGAGTCCGGAAGCCAAACCGGACGATACCGAGTGCCACCGGTCGCAATCGGCAATCTTCGTACGACGCTGTGATCGTGGTGACTACAACTCCTGCACCCGTACCGATCTCGAATTCAAACCGACGCCCGACTCCAAGCTGGCCCGCAAGCGCGAGGAGCGCGACCGCAAGCTGGCAGAGAAGGAGCGGGAACGGAAAGCACAGCAGGCGGCCCAGGCgcagcatcagcaccagcagcagcagcagcaacagcagcaacagcagcagcaacagcagcaccacccgTCAATGCAACCCCATCCTCATCAACCACCGTCCCATccgcaccatcagcagcatccgAGCGTGACGGCGCACCAGCAGGCGGTGGCAGCTGCCCAGCACCATCAAGCGGTTGCcgcatcggcagcagcagcggcggccgccgctcagcatcaccatcagcaacagcagcaggcgcagcagcagcaggcggcaGCCGTTGCGCAACATCAAGCGCAGCAGGCGCACCACCAGGCACAGCAGCAGGCGGCCGCTCAGCAGCAGGCGCAGCAGcaagcggcggcagcagcggctgccGCAGCGGCAGGCAAGCCGGGCAGCGCGGGCAGCAGTAGCTCGGGCTCGGGCGGACCGCAGGGTCCACCACCGCCGGGCCATCATCCGGGCCATCCGTCGCCTGGGCAGCAATCGATGAAGCCGGACATTAAACCGTACCCGGACACGCCGGCCCTCAGGCAGCTGTCGGAGTACGCGCGGCCACACGTTGGTTTTAGTCCTGTGGAAACGATGGTTCCGCCACCATACCATCCACTGTACAATAGAGAAAGGGACATCTTTTTTAGGGAATTCGAGGACCTCAAGAACCAGCCCGGCATGGGCCCATCCCGGCTAGATCCGCACTGGATGGAGTACTATCGAATGAGAGGAATGCATCCGTCACAGTTCCCTGGGCTTTACGGCAATCCGGCGGCCATCGCACAACTGGAGAGGGAACGAATAGGCTTGCCACCGCATCCTGTTGCTGGGCTGGATCCATCCGATCCGATGTTGCGCTTGGCTGGCGAATACCATGCACACTCCCATACGCACTTGCACTTGCattcgcaacagcagcaagactcggcagcagcggcggcggcggcagcggcagcggcggcagcaggtTTTCATCTACCACCCAACGTTCCTCCCTATCCACGGCCGAATGTTTTAATGCCGAGGGATCCCCATTCGGAGGTGCTGTTGCGTATGTCCTATGATCCACTGCAGGCCGCTGAATTTCAACGACAAAGTGCATTAGACCGGGCCCAATCGCTGCATGAGCAGTACATGAGACAACACGAGCGCGAGATGAAGGTGCGTGCACTGGAGGAAGCAGCACGGGGTGGTAAACATTAG
Protein Sequence
MATPPTEGEIRVGPGHQVNDIYATLPDYQPIENYRSEDDEDRDLEDPRWTPGLYIDNDLLMYLTAARSISAFQGMCEEDGCMAASRDDTTINAFDVLHDSGYDAGKALEALLKCPVTKGIEKKWTEEETKRFIKGLRQFGKNFFRIHKDLLPHRPTPELVEFYYLWKKTPGANQNRPHRRRRASSLRRRNTRTNSNASGTAPNSSGSSSSSSNSNSKKEQTPERTVTDTGSSRPSPIGKEENSSVTEDDVSECDSDSSANKATAAAAAAATATANGTAGVGAGSNGGGGGGGGGGGGGSSSSSSSSSSSSSSSSSSSSSSSSSSSNGSNGGVGGSVGVGDFTTTASSGGIGGGTVTGEESPSRMRTRQKPTKETNATNAKRPKRGGTETPEQQTATGTAAAAATAGAAATAGGGGGAPNTGGSSGNGAGGNLDSPKTPSKTTNSSSNNSSSTNTNTTTTTGTGNGGNSSSSGAVGPTVDGVGGKHGGSQTGSKGSKSAGPGKTETTTPSKGKKRSNEQEVDGSDEKDGQKRKRSDSPAESLTTDSRPGSVLDEMESVSEAATETSIGTRTTGTPTPVGHERLQGANSVSSGTGSSAGTAADGSVPSAKDDEKDPLSLGPPLAAEPMVTESNENSSSSNTTTSTVAKSSSGGSEDKDDDSNAGATGAVVASAVATVPTAADTAKLPETEDISPPSTAATTPVATPAPPTAGALLPGADGSEPPQQGVAPSSEEAAAATNGTSVSTAGSGTTTTVVEGKPCVNALGPAPSSDQEMASKLANMKQEGSAATGPPTGAPAGSAAASVDFNSKDVFIKKEPNEESGAAAAAAASAASAGSSSAPGEQSSGSGVGGGAAPTSGAPSEPQDLKLKIEVKSEAKLMPGGGAGSNESSSQGGAAQGPPEMKYDPENLVMKPYESHIKYGGHPGEDGMKYGGEHKYGPLPPHHQPGPGEPPGLKYGPPGPQDEPLEYDMKRYPAHGPPPPPNQDGGPLPLKLGGGPPGPPSASGAPGEPPSAAGPPPHMKLSQYAQDLTGLNLKYPPPDERSKFAPSPASDSGSGSGVAPPPPSGVGGPLPLIPKSHYPDPAQLSMLRQHYEHTFKYDPMAAVKYGPPGMPPFGAGPPGQHHHPHHPLAGGLPGQPQSQPQDLKYLPPEAMGPMKYPPSSVASDTPTSLKNNSFSADNLLKSSSSSSSGGPGANDASNPLDVSASGRHAITPNQDSQGSNSSSQATPLHGSSIASPQSGGPPPSLPPHGAGSYPPPHGPPPPGHPGHIVNPGLMPTLLGAGPNSSPVPPTSQPGGVHVPPVLGGHPLAHPGGVPPPQLLPTPPGSGPYQPSNMHRPGGPMPPSSVPSSVSLAVSSSGSTALTSTTASSSSSTAVTSHSPAPMRPSSDNGPLGLQPMAHHHRSDRDREPPRPGTNELPPTRASPINSLLQGVPPPHGMLPHPLPLHLGHPGMQLPPHHPAHLAGPLMGHAGLLPPSLAAHSAGLPLLGGPTPSALGSLMEVAGAGRRSPSSGPGSLAGGPHGHLPPTSMHQSVSALAAQSPSTPTGAGGGGPPSSSSSALSRASPNVPPGGPGTPGGGGYPGPGGHHHRSSSPANSNSSGLSRGSPMHLSHHPSTPGAGGAGGSGSSSAAAAAAAAASAERDRQIMRQQSPHMTPPPPSSSAPSAALISSPLSKMYGGPSGQRSPPPSHPFRPGASPPVIRHPQMPLPLPMTGPMAGIPGSVMHASQPYPLMHPSLFNPHHHNPFYAPYPYGPAYGPGFSYMKPGGSPLDNPMLHGHPTAIPPPRPEDAPGAGGPGVHGNAGEKSKSSGGGSKSQQPQTSSSSTSSVSSLSGSGGNDRSKQSSSGSGNGGGGGPGSGHSNSSSQSGSSAGPPGGPGRGGPSPSGAGGPGMVGMPGGPPGGHPLSGSPFHPAGPPHHHSPYGPPQPHNPFIENQLPPVGGGKPTSHMDALRAHAHAAAGGGLGPPPGHHPHHHPGHGPPPPPGHHPAHPSEPVHIETLDIDPDPEPPSPVHDMNRGPSPEAKPDDTECHRSQSAIFVRRCDRGDYNSCTRTDLEFKPTPDSKLARKREERDRKLAEKERERKAQQAAQAQHQHQQQQQQQQQQQQQQQHHPSMQPHPHQPPSHPHHQQHPSVTAHQQAVAAAQHHQAVAASAAAAAAAAQHHHQQQQQAQQQQAAAVAQHQAQQAHHQAQQQAAAQQQAQQQAAAAAAAAAAGKPGSAGSSSSGSGGPQGPPPPGHHPGHPSPGQQSMKPDIKPYPDTPALRQLSEYARPHVGFSPVETMVPPPYHPLYNRERDIFFREFEDLKNQPGMGPSRLDPHWMEYYRMRGMHPSQFPGLYGNPAAIAQLERERIGLPPHPVAGLDPSDPMLRLAGEYHAHSHTHLHLHSQQQQDSAAAAAAAAAAAAAGFHLPPNVPPYPRPNVLMPRDPHSEVLLRMSYDPLQAAEFQRQSALDRAQSLHEQYMRQHEREMKVRALEEAARGGKH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103618;
90% Identity
iTF_00102310;
80% Identity
-