Aara004408.1
Basic Information
- Insect
- Anopheles arabiensis
- Gene Symbol
- JARID2
- Assembly
- GCA_016920715.1
- Location
- NC:80029955-80041529[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-21 2e-18 66.0 0.0 6 89 1923 2004 1918 2004 0.93
Sequence Information
- Coding Sequence
- ATGGTCGTTTCGAAGGAAGGCAAGCGCCGGCGTAAGGTGACCGCCATCGCACAAGCAGCCGGTGGGGGCAGCTCCAATCCATCCTCCGGCAGCGGCACCAATGGGCCGAATGTAGCGCCCGAGCGGGATCTTTCGCCACCGGAAATCCCGAAACGTCCGAAGGTACATGCACAGCGAAAGTTTGCCCAGGGCCAAGGGACGGCCTCCTCGTCCTACCTTAGCTACTCGTCTGCCCCACCAACAACGCCCGGCAAAGATGGGCCGAACCGAGCAACGCAATCCGGCGCCGGCAATGGCACAACGCCGACCGGTCCCGGCAGCGGAACCGGAGCGGACGCCACTGCACAGGTTCCGGAACTGCTGCCCAACATGCGCCCCAGCACGGACGATTTTCTTACGTTCCTGTGCTTCCGCGGCACGCCGGTTCTGCCGCCGGAGTTGGACTTTTTCAACAAATCAAGCACCACTGCCGCCGGAAACAGTGGCACAACCAGTGGCGCAAGATCATCAGCCACAGCGAGTGGCTCCGGCAGCTCTAAATTAAAGGGCTCTCCGCAAGCGAAACCGGCCATAGCATCCACGAACGAAACGGCCGCATCTGCCAGCAATCCTGCTACAAGCTCTTCCAAGCCGGCCCAAGGCGCCAAACAAACGCCAGCAACGCAAGTGAAAGCCACTGCACAGGAATCAACCGGCCAGGACAAGGCAACTGTAGCACCCGCTGCTACATCGTACATGCCGTTTGCGGTGCAAAGGGCCGAGCAACATCCGGCCCCGGCTGAGCCGCGAACCGATCGAAAGCGTACGCAGGATAAGATGCAAGCGCTGCGTAAAAAGTACCACGATCAGCGCGTTGCTAAGCTGCGTGCGACGGGCCAGGGCCAGAGGCAGAGTGGCCGCGGGACGGTGGCAATATCGACACGCTCTTCGGCCGTTCCTTCGAAAGCTGGACCGAAAGAGGACGAGGAAGAGGCggtagaggaagaggaggaagaggaagacgatGAAGACGAAGACGAGGCAAGTTCGGACAATGAAGAAAAGGAGGACGAGCAAGAAGGCAAGCCGGGCAAAAAGGGCGAAAAGGAAGAGCCAAACGTTGGCAGACGGAAAAGTGGGCTGCGGAGCGGGGCAGCATCGCACGCATCCAGTCCGGCGGTCGAGAGCGGGAAAGGTTCGCCGGCCAAAATTCCGCGCAATACGAAGCGTGATTCATCGAAAGGTGGCCCAGATCCGGAGACAGGCAAAGATTCTCCAGCAAAATCAATTGAAAGTAAAGCTGGTGGTAAGGGGACGAAGACAGCAAATACTCCACCTGCTACGCCTACTGAGGACGCTTCCAGGCAGAGTGTAACGCGtacagccgcagcagcagcagcagccgctaaTTCGAAGAAAACGGCCAAAGAAACGCCGAAAAGTTCACCCACACAGCAGCCCGCGGCGACGGTCGCTTCCGACACGGAGGGCAAAGAGAAGCGTACGACACGGCTGTCCGCTCTGCGCAATCCACCCCCTGTGACAACTAAAGCAACGCCCGAAAAGTCGCTTGCTGCGACGAAACCGGCAAAAGAGAAGCCGCAACAGAAGCAGCCGGATCGAGTGGACTTTTCTTCCGACGATGACGAGCCGCTGTCACGGACCACTCGCACCGATAAACGTGCGTCGGACAGGACGGTTAGGACTTCGCCCGAGGCGGGCAAAACGACGCGTTCCGGTAGGAGCCGTAAGTCGGAACCGGCCGCCACGCTGGACAAGGATCCGGACGAAATGCCGGACAAGAAGACGCGCCGTTCGGAGTCGGTCGTCAGCCGGCGGTCGGATATAAGCTCCCGCAAGTCCGAGATGCGTGAAGTGCTGCCGAAAAAGGCGGAAGAAGCTTCAAAACCGCAACCGGCCCAGCGAGGACGGAAGCGGAAGGAACCGGTCGCCCAAACGCAGCAACCCGCCGTCAAGTCGACCAAAGAGGAAGAGGCCCCGCACAGCGAGCCGAAGGCGGAAGGTGCGACGGATGCGACGGAGCGAAAGCAGCCGGCAACGGTCGGGCGAAAGAAGCGCGAAACGCCAGCGCCGGATGCAGCCGGACGCGACGGTACGCTTTCGCCGGAAGTGGAGGAGAAGAAACCGAAAACGGCCTCCTCGACGCCGGTCGAATCGCTCAGCACGTCGCGCCCGTCGCGCAAAACGAAGGAAGCGGCCACGCTGTACATGGAACTGATCGGGCGGAAGCTCAACCACGACGACAAATCGGACGACGATGCGTCCTCGCTGGACAGTCTCGAGCTGCCGAACGTGCGCAAGATGGAGCGGATGGAGAACGAGCTGAAGGCGAATGCGGGCAAGACGCGGGACGCTAGACCGTCGGCAGCTAAGGCGAAAAGGAAAGCGGGAGCCGCAGCCGCCCGGTCGGTGGACGAGGACGAGGTGGAAAAGGAAGCGGGCGGCGATGAGACGAAGGTAATTGAAAAAAGCTTTAGCGATTCGGACGAGGAACCGTTGGCGAGCAAGTTTCagcgcaagcagcagcaggcgcgcCGACAGACGGCCAAAGCAAAAGCGGGAGCACCGGCCAAACAAACCGCCGGGCGGAAGAATGCGAAGAAAGCGAACGTGTCGGATGAGGGGAAATCCACCGAGGAGGCTTTATCGCCCGACAAAAAGGACGGCGGAGAAAGGAAGTCGGCCAAGGTCGAGGAACCGCCGGTGCAGCGGCAACAAGCGGCCACAAAAAAGGGTTCGCTGGTCggagcggcagcggcagccgcCAGCATAAACTCCCCGACTGggacaatgaaacaaaacggtaCTACGGCAGCGAATGTTGTCCCGGGCACGGGGAGTAGTACCTTTACACGCACTCCCACGAAGCTGAATGCGAAAGGTGGTGGGACCACCAGCAGTCCACTCGAATCTCCGGCCCTGTCGTCCGATCATCTGAAAAGTCCCACCACCTCGGAGGGACAGAATTTGTCGCGGCTGAACAAATCGATGGACAATACGCAGCTGTCGACCACGGTCGAGCCGGCCGAAAGCCCCATCAAGATCCCGCAGATGCTCAACATACCGACCGTCGTGCCGAGCAGCTACCAAACGTCGTCCTTTCTGCACCACGCGTCGCCGGTGACGTCACCGACGCAAGCACTCCACCAACAGCAAGCTCCCTTTACCCGTGCCATAAAGCCGTCGCTTGGGACGGCGACGAACGCTGCCGGGCCGGGGGTGAACAATGCTTCTTCCACCGATGCTTACCACCACCCTTTAGCGAACGCGTCCAgccaaccgaccgaccacGGTAGCATGCCTTTCAATCGCTCTGGCACGACGAATGCGACGAATGCAAATACTGCAAATGCCGCCGGCCAATCCACCTCCGCCACGCCGAAGGCAGACTTTACCCTTCCGCTGGACGATGCGGACTTTCTGAAAGCGTTCGAGAAGTGCGCCTCGGGCGACCCGATCGGGGCGGATAAGCCTGCCGCCCACTCGTCCCTGCTCGGCAACCTGCTGCCGAGCAAGGAGGAGTCGGAAAAGATTTTCGGCATCGCTAGCGTCAGCCTGGCGCAGAGTTCCGGCCCGCTCGACACCAAGTGCACGCTGGGGAAGTGTGGCTCGGTCCACAAACCGCCGCTGGGGCCGCCCGTGCTGACGGAGTCGCTGCTCGGTGGCAATCTGTCGCCGCGCGATCGCCGCAAGGCGAAGGTGAACATGACGCACGAGCAGATACAGAAGTGGATCTACGAATCGTCCTGGTCGCCGATCGAGGACGACCTGAAGGATGACGagctggagctgctggagcCGGGCGCACGCACACCGCCGCCCCCGGTGACGGGTGCTGCGGCGGCTTCTACTGCTTCCGCACCGGCCGGGACCACCGCGCAAGCGTCCACTACGACGGCGTCCGGCTCGGGTTGGGCAGGAATGATGGCCTCCACGTCAACGCCGATCAGCACGCCCGCCCACGGCAACGGTCGGGGCAAGGAAGAGCAGAATCGTACCCCTACGAGCGCTCCAGTTGTTTCTCCTCTCGCCGCAACTACTGTGGTGGGGGAGAAAAAGGACACGACACCGTTCCAGGGACAGAAGCAATCGGCCACCCCATCCGCTCAGGAGGTAAAACCGGCAGGCAACGATAAGGAAAGCACTCCGGCAAAGGCGCAAAGCAGTGAGGCACAATCGGGCAAGGAAGGGGGAGGACCTTCGGCGTCCACTCCAACCGTCAAGCCGAAGGAACCGAGAAAATCCAAAGCAGAAACACCCGCAACACCGACGACAACGCAGACTGCACCGcgtgccaccgccaccacaccGACCACGACGACGTCGGGCGAACGGAAACCAATCTACCGGAATGCAACGGGACGAACGCCCGTCTACAAGCAGGACGCAATGGCCGCCAAGCAGTCGCCGGCGGCACAAACGACCACCAGCCCAGCAGCTGGCCAAAGCGTACCGACAACATCGCCTTCCACGAAGCCAGCGGCCGGTCAAGGTCCCTCCGGTGGTGCCCcgggagcaacagcagcatccgcACAGAGCGGCAGCAACAAGTTTGGCGCCTTCTCGCCCGTCAACGAACCGAGTGTGTACTCGTTCGACAAGGAGGAAGACTTTATGCCGGTGGCGACACCGTTCCGTAGGCAGCATGGCCCAGCTACCGGGGCAGGCGGTCGACGGGAGTCGTGCAATTCGTCCGCCCGCGATGAACCAACTGCCAAGCGTGATGCAACGCCCGTGGCGGACGAGAAAGCGGCTTTTCAGAAACCACCCGCCAtggcgagcaaagcaaacaacgcGGGAGGATCCAGTTCGGCTCCCGCCACTGCCGAGGAGAAAGCGAAAGCAACCGAAGAGGACGCAGATCGGAAGGACGAGGACAAACCGTTGACGGTGAAGCAGGAAGCGAGCGATACCGAGGCGgacggtggtgctggtggtagtgGCGCCGGTGGACAGACGTTTTACATTCCACTGCAGGGTCCGACCGCGGGTGGCAGTACGGCAGGCGGCAGTACCGGTGGGAAATCATCCGATCAGCTCATCCAGGGCGTCGCAGTCAAGCTCGGAACGGAGGGGCCCGATGGGCCGAACCAGCGCGTTATAATGCACGCCAAGCTGGTGACGAAGGCTGAGATGGGCTCCAATCCCACCACGCTGCCCGACTCGATGAACGTGCAGGAGCTGGTCAAGAGCCTAACGGCGCAGGGTGGTGCGGCGGCCGCCCTCGGCAAGGAGGGGCTGGCGAAGCTGCTCCCCATGGGACTGCTCCAGTCGCGGCTCAAGTCACCGACGGCAGATGCCCCAGCGCCCTCAACCGATGCACGCACACCGACGCTCGAGGATCgggccagtgccgaaccgatGTCCCGCGGTCTGTCGCGCATCGCCTCCAACTCGTCCCTCTCGTCCCAGCGCTCGAAGCCGACGGGCGGCAAAAGCAACGCCAAGGGCGGAACCGGCGCTGGTCGGGGCAGTGCGGAAACGGTGCCGCCACCGCAGCCGGACAACAACACGGTGTTCCCGCGCCGGGACGATCCGGCCCAGATGGTGGAGGCGCCGGTGTTCAAGCCGACCGAGAAGGAGTTCCACGATCCGATGGAGTACATCGAGCGGATCGCACCGATCGCGTCCCGGTTCGGCATCTGTCGCATCGTGCCGCCGGCCAGCTTCAAGCCGGAGTGCCGCATCGCGGACGATATGCGCTTCATGGCGTACAACCAGTACGTGCACAAGATGCTGCACCGGTGGGGCCCGAGCGCGAAGGAGTACGCCGCCATCAAGAAGTATCTGGCGACGCAGAGCATCAACCTGCAGGCGCCGCCGGTGATCGGCGGCATGGAGGTGGACCTGCCCCGGCTGTACCACACCGTGCAGGAGCTCGGCGGGCTGAAGGAGGTGATCGAGAAGAAGAAGTGGGCCCGCGTGTCGGAGGACATGTGCATCCCGAAGGCGGCGCACGATCGCGTCTCGAAGCTGGACGACATCTACTGCAAGTATCTGCTGCCGTACGATACGCTGTCGCCGGCCGAGCGCCAGAAGCTGTTCGACGAGGTGGAAGCGGACTGGGCCAAGCGGGAGGCGAAGGCGCGCCGCAACGCGGACAAGGGCGTCGGGTCGGAGATCCGCAACAGCGGCGACTCGGACGAGGACGACTCtaacgacgacgaggaggaggaggacgaggacgagtgCTCGATGGAGTGCATCGTGAAGGGGCGCAGCATGCCGCTGAACCAGTTCTTTCGCATCGCGCGCAACACCATGTCGCTGTGGTTCCGGAACAGCGAACCAACGGTGGCGGAAATCGAGGCCGAGTACTGGCGCCACGTCGCGGTGCGCGACAGCCACGTGTGCGTGCACTCGGGCTCGATCGACTCGAGCGCGTTCGGGTACGGGTTCCCCAGCCCGAAGGTGAAGGGTTCGTCGTGCGCCAAGCACCCGTGGAACCTGAAGGTGCTGACGAACAACAGTGGTTCGATACTGCGCTCGCTCGGCCCGGTGATGGGCATCACGATACCGACGCTGCACGTCGGCATGCTGTTCAGTGCGTGCTGCTGGTATCGCGATCCGCACGGCCTGCCCTGGATCGAGTATCTGCACACGGGCGCGAACAAGATCTGGTACGGCGTGCCGGACGATCAGAACGCCAACTTCCGCGCGGCACTGACCGTGCTGGTGCCGACGCActgccagaacaagacgatcTGGCTGCCGTGCGATACGGCGATGGTGCCGCCGCACATGCTGACGGACCGGAGCGTGTCGCTGTGCCGCACGGAGCAGCAGCCGGGCCAGTTTGTGGTGGTGTTTCCGCGCGCGTACACCTCGAGCCTTTGCACCGGGTACGCGGTGTCGGAGAGCGTGTACTTCGCTACGAACAGTTGGCTCGACACGGCCAAGGAAGATTTTAGGGACATACAGGAAAGCTGCGAACCGACCATGTTCTCGGTGGAGCAGCTGCTATTTGCGATCGCGAACGATCAGCGCAGCAACCATGATACGCTTGTGCAGGCGTACCCAATGATAGTCGATATCTACGAAAAGGAGAAACTACATCGACAAACGCTAAAGGAGCAAGGCGTAACCAAATCGGAACGCATCGAGTCGAAGAAGAAGAGCGCCTCGCTCGATGAGTTGGAGTGCGAGCGGTGCCGGGCGAACCTCTACCTTTCGCTAGTGAAGGTAAAGGTGACCCGgtcggacgacgacgacgaggaagGGGACGAAGACAATACGACGGTGGACGAGGAGGAGCGCATCTACTGTCTGAAGCACGCGGTAAAGCATCTGGCCGATGGTGGCCTGCAGACCAAGCACTGTCGGCTGGCGTACACCTACTCGCTGGATGACATCGAGGAGCTGCTGAAGAAGCTGCAGGACCGGATCGCCAACAAGAAATCCACGAAATCAAGTGCCGGTagcagtgctggtggtggtggtggcggaggaggaggcggaGGAGGAAGTGGAagtggtggaggaggtggtggtggtgggggcgGTGGTAGTGGTCGTGGGAAGTCATCCCTGCATCTAGCGTCCACCTCGTCCCAGTCGTCATCGTCCTACCAGGCGCCCAGTCACAGCAAGTACGCTGGCATGGCAACGATGTTAAAGTAA
- Protein Sequence
- MVVSKEGKRRRKVTAIAQAAGGGSSNPSSGSGTNGPNVAPERDLSPPEIPKRPKVHAQRKFAQGQGTASSSYLSYSSAPPTTPGKDGPNRATQSGAGNGTTPTGPGSGTGADATAQVPELLPNMRPSTDDFLTFLCFRGTPVLPPELDFFNKSSTTAAGNSGTTSGARSSATASGSGSSKLKGSPQAKPAIASTNETAASASNPATSSSKPAQGAKQTPATQVKATAQESTGQDKATVAPAATSYMPFAVQRAEQHPAPAEPRTDRKRTQDKMQALRKKYHDQRVAKLRATGQGQRQSGRGTVAISTRSSAVPSKAGPKEDEEEAVEEEEEEEDDEDEDEASSDNEEKEDEQEGKPGKKGEKEEPNVGRRKSGLRSGAASHASSPAVESGKGSPAKIPRNTKRDSSKGGPDPETGKDSPAKSIESKAGGKGTKTANTPPATPTEDASRQSVTRTAAAAAAAANSKKTAKETPKSSPTQQPAATVASDTEGKEKRTTRLSALRNPPPVTTKATPEKSLAATKPAKEKPQQKQPDRVDFSSDDDEPLSRTTRTDKRASDRTVRTSPEAGKTTRSGRSRKSEPAATLDKDPDEMPDKKTRRSESVVSRRSDISSRKSEMREVLPKKAEEASKPQPAQRGRKRKEPVAQTQQPAVKSTKEEEAPHSEPKAEGATDATERKQPATVGRKKRETPAPDAAGRDGTLSPEVEEKKPKTASSTPVESLSTSRPSRKTKEAATLYMELIGRKLNHDDKSDDDASSLDSLELPNVRKMERMENELKANAGKTRDARPSAAKAKRKAGAAAARSVDEDEVEKEAGGDETKVIEKSFSDSDEEPLASKFQRKQQQARRQTAKAKAGAPAKQTAGRKNAKKANVSDEGKSTEEALSPDKKDGGERKSAKVEEPPVQRQQAATKKGSLVGAAAAAASINSPTGTMKQNGTTAANVVPGTGSSTFTRTPTKLNAKGGGTTSSPLESPALSSDHLKSPTTSEGQNLSRLNKSMDNTQLSTTVEPAESPIKIPQMLNIPTVVPSSYQTSSFLHHASPVTSPTQALHQQQAPFTRAIKPSLGTATNAAGPGVNNASSTDAYHHPLANASSQPTDHGSMPFNRSGTTNATNANTANAAGQSTSATPKADFTLPLDDADFLKAFEKCASGDPIGADKPAAHSSLLGNLLPSKEESEKIFGIASVSLAQSSGPLDTKCTLGKCGSVHKPPLGPPVLTESLLGGNLSPRDRRKAKVNMTHEQIQKWIYESSWSPIEDDLKDDELELLEPGARTPPPPVTGAAAASTASAPAGTTAQASTTTASGSGWAGMMASTSTPISTPAHGNGRGKEEQNRTPTSAPVVSPLAATTVVGEKKDTTPFQGQKQSATPSAQEVKPAGNDKESTPAKAQSSEAQSGKEGGGPSASTPTVKPKEPRKSKAETPATPTTTQTAPRATATTPTTTTSGERKPIYRNATGRTPVYKQDAMAAKQSPAAQTTTSPAAGQSVPTTSPSTKPAAGQGPSGGAPGATAASAQSGSNKFGAFSPVNEPSVYSFDKEEDFMPVATPFRRQHGPATGAGGRRESCNSSARDEPTAKRDATPVADEKAAFQKPPAMASKANNAGGSSSAPATAEEKAKATEEDADRKDEDKPLTVKQEASDTEADGGAGGSGAGGQTFYIPLQGPTAGGSTAGGSTGGKSSDQLIQGVAVKLGTEGPDGPNQRVIMHAKLVTKAEMGSNPTTLPDSMNVQELVKSLTAQGGAAAALGKEGLAKLLPMGLLQSRLKSPTADAPAPSTDARTPTLEDRASAEPMSRGLSRIASNSSLSSQRSKPTGGKSNAKGGTGAGRGSAETVPPPQPDNNTVFPRRDDPAQMVEAPVFKPTEKEFHDPMEYIERIAPIASRFGICRIVPPASFKPECRIADDMRFMAYNQYVHKMLHRWGPSAKEYAAIKKYLATQSINLQAPPVIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVSEDMCIPKAAHDRVSKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREAKARRNADKGVGSEIRNSGDSDEDDSNDDEEEEDEDECSMECIVKGRSMPLNQFFRIARNTMSLWFRNSEPTVAEIEAEYWRHVAVRDSHVCVHSGSIDSSAFGYGFPSPKVKGSSCAKHPWNLKVLTNNSGSILRSLGPVMGITIPTLHVGMLFSACCWYRDPHGLPWIEYLHTGANKIWYGVPDDQNANFRAALTVLVPTHCQNKTIWLPCDTAMVPPHMLTDRSVSLCRTEQQPGQFVVVFPRAYTSSLCTGYAVSESVYFATNSWLDTAKEDFRDIQESCEPTMFSVEQLLFAIANDQRSNHDTLVQAYPMIVDIYEKEKLHRQTLKEQGVTKSERIESKKKSASLDELECERCRANLYLSLVKVKVTRSDDDDEEGDEDNTTVDEEERIYCLKHAVKHLADGGLQTKHCRLAYTYSLDDIEELLKKLQDRIANKKSTKSSAGSSAGGGGGGGGGGGGSGSGGGGGGGGGGGSGRGKSSLHLASTSSQSSSSYQAPSHSKYAGMATMLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00094932;
- 90% Identity
- iTF_00104181;
- 80% Identity
- -