Basic Information

Gene Symbol
pnr
Assembly
GCA_002846955.1
Location
NJHH01001784.1:1-2608[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-17 4.7e-14 51.2 4.6 1 35 577 610 577 611 0.98

Sequence Information

Coding Sequence
gACATACTTGCGGAGTCGTCCGAGAAGCTCGAGAACCTGATCGCGTCGTCGCCGGCGACGCTCGCGCTCAAGGCGTCGGCCGAACAGGACGCGGTGGCGGCCCTGCAAGCCCTgcgcaacaataacaatcataCAAAAGCAGTTACCTCAGTACTTAGTAAAACGCACCTGGACAGCCTGGAAGCGAATGCCGTATCTGTGATTCCTATCGAGAGTATGAAACTGacttccaccggcaccggaagccTACTCTCCTCTCACTCCCAGCACCAGCCGACGAtcgtacaccagcagcagcagcagcaggaactcTACCAGCAGCCACAGGCGGCGCAGGAACCAGCCCAAAGCCAGAGCCCGCATCCACGGCAACCACTGATCCAGGTGCGCAACCTGACGCAGCTCCAGAAGGAGCACCTCGAGACGGCCGCGGTGTTGATGGACATCAGCAAGAAGGTCATCATCTCACCACCCAGCTCGAACCCCCAGTCGCCCAGTCTGCTCGCCGaccagaaacagcagcagcaacaatcgcaacaacagTATCAGCACGCTAACAATAACAATCAGCTGACGATCCAGCAACCGCAAAGTATTAAATCTTCTGTGATAAAGCAGCCTCACGAATACCTTTTGAACAATTTGAAGCGTACGCCCAGCAGCGAAGAGATGGATCTGACGGTGAAGCGCGTCAAGGTGGAACCGACCGCCGTGATCTCGCCGACGCTCGTGCGCAAGAACGTGATCAAGCGGGAAACGATCGAGCATctggcggcggccgcggccgaTGACCAGGCAAGCCAGCACAGTGACAGCGTCGATAGCAGCGATTCCGGTCGGCTGCAGATGGACATATCCTCGCAGGATGCGCACTCCGAGTGTGCCGGTGACGAGCTGAAGCTCCGATCGagcctcaacaacaacaacaacaataacaatcaccaccaccaccatcatcaccaccagcatctaCGCCACCAGCAGGCGGGCAGTCCAATGGACCATATCGGACGTGAAACCCCCGACAGTCTGCACTCACtcgacgagcagcaacaggcgaTGGCTGCGGCAGTCGTTGCGGCCGCCGTCCATCAGATACCGTTCGGTGGGCTAGGCGATGCGACCGATCCGGCCGTGGCGCAGCTATGGCAAGCGTTGGCACAAAATACGAATCTCATCgtcaacggtggtggtaacgAGGCGACGGCCCTGCTCCGGAAGATGATCAGTGCCCAGAACCTTGGCATACAGTTCGGTTCAACAGTTCCGGTCGGTACTGGTTTAGCGATGCTCAAGcaaaacgaaatcaatcgaCATAATGCGGCAAGCGGGCAGAGTGGCCGTCGGAAACAGACTTGCCCCAGTCGGACACCGCTCGATGGTACCTCCCCTAACGGATCGCTCGACAGCAACGgtgcggcggcagcggctgcggtTGGAAGTGTCACTAACGGAgcagccggtgctgctgccctgctgAAGCTGGCATCAGGTGGTGGTAAAGGTTCGTCTACGGGCAATGTGTTGTTCCGGGTTGCAGCCACGGAGCAGCACacggccagcggtggtggtggtaaggcCAGTGGTGGCCGTACCGAGACGAACAGTAGTGCCACGTCCGGCAACAGCAGTCCCCAACTACAACCCCTTCCCAAAGCGTCGGCTGCCTCATCACCGCAACtaacgcaacagcagcagcagcagaactcgCAGCAGAAGGACATGTCCTGTACGAACTGTGgtaccacgaccaccacgatcTGGCGGCGGAACATCCGGGGTGAGATGGTTTGTAATGCTTGTGGGCTGTACTTTAAGCTGCACGGCGTGAACCGACCGCACACGATGCGCCGTGACACGATCCACACTCGGCGACGTCGGCCAAAAGGGGACAAGAGCACACGAAGGAAATCTGGGGTGAAGCAGGAAAGTGGAGATATCGTCGCGGATAACGGTACCGACGCGGCTGTCGATATGCAAGCCCTGCAAAACCAGCTAATGGCGTTGCGCGATGCTACTCGAGGCCAACAGACCAACTTCACCATGACAcctCAGGCCTTTCAGCAATATCTGCGCGTAACAAACTTTGATGGGA
Protein Sequence
DILAESSEKLENLIASSPATLALKASAEQDAVAALQALRNNNNHTKAVTSVLSKTHLDSLEANAVSVIPIESMKLTSTGTGSLLSSHSQHQPTIVHQQQQQQELYQQPQAAQEPAQSQSPHPRQPLIQVRNLTQLQKEHLETAAVLMDISKKVIISPPSSNPQSPSLLADQKQQQQQSQQQYQHANNNNQLTIQQPQSIKSSVIKQPHEYLLNNLKRTPSSEEMDLTVKRVKVEPTAVISPTLVRKNVIKRETIEHLAAAAADDQASQHSDSVDSSDSGRLQMDISSQDAHSECAGDELKLRSSLNNNNNNNNHHHHHHHHQHLRHQQAGSPMDHIGRETPDSLHSLDEQQQAMAAAVVAAAVHQIPFGGLGDATDPAVAQLWQALAQNTNLIVNGGGNEATALLRKMISAQNLGIQFGSTVPVGTGLAMLKQNEINRHNAASGQSGRRKQTCPSRTPLDGTSPNGSLDSNGAAAAAAVGSVTNGAAGAAALLKLASGGGKGSSTGNVLFRVAATEQHTASGGGGKASGGRTETNSSATSGNSSPQLQPLPKASAASSPQLTQQQQQQNSQQKDMSCTNCGTTTTTIWRRNIRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSTRRKSGVKQESGDIVADNGTDAAVDMQALQNQLMALRDATRGQQTNFTMTPQAFQQYLRVTNFDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00098697;
90% Identity
iTF_00098697;
80% Identity
-