Aaqu009528.1
Basic Information
- Insect
- Anopheles aquasalis
- Gene Symbol
- -
- Assembly
- GCA_002846955.1
- Location
- NJHH01004637.1:10239-11681[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.2e-13 7.4e-10 37.9 0.1 2 36 262 296 261 301 0.94 2 3 0.14 2.4e+02 1.0 0.0 23 42 330 349 327 351 0.85 3 3 3e-09 5.3e-06 25.5 0.0 4 38 371 405 368 410 0.89
Sequence Information
- Coding Sequence
- ATGTGCGCGATGGCGCTGCCAGTATTATCGGCCACACCTGGCATGGTTTCTGGTGTCGTGTGGATGAACCACCGGGATCATATTCTGAACACGTATCGAGCGATTTACGAAAGCGGAGAGTACACCGATTGcatcctggtgctggcggaTGGCGCACtgcaagcaaacagcaccgtGCTCGGGATGGCTTCGGCGTTTCTGGAACGCGTCTTTGCCGGCGCTAGTCTAGCGGCCAGTACCGGGCAGCTCGCAGTCTCGATCCCGGACGTGACCACCGACGACATGCAGCAAATTCTGCTGTTTATACACACCGGAGAGGTTAACCTGCGGCCCTGCCACTTGTCCAGCTTCGTGGAAGCCTGCTCGCTGCTGGAACTACGCGGTATCAAAGCCTCCGATGGCAACATGATGGGATTGGCGATTAGCGGTTCAAACATCGTAACACCGCAGCAACAGGCGGACGAGCCACTGATAGACCTTACGTCCACTGAAGTACCGCAGTGCTTGAGCGATCTATGGTTTCAGGACAGCGAAACAGAACTGGACACCAACCCTCCAGACCCAGATCCGGTGCTGCACGACCACGAGTCGCATATAACGAGTGCCGATGAAACGGAGAAAATTGACATTGCAATGAATGCACTCGCTGGTGGAACGCTGGAAACGATTGCCAACTATGATTCGATCACAGCACAAGAAAGTCACCACATGGAAGCGGAAGATCCTTCTACGGAGGGCAAAGCGAGGCACTCCTCTCTTAATGAACCGAAGATATCCGGATACGAAGAACGACTTCAAGCGGCCGTCGATGCTATAGCGAACGAAAGGCTTAGCTATCGTAAGGCTGCGCGGGCTTTCAAAATTCCAACGACTGTACTGTGGCGCCGGGCGCACCAGATCCTACGGGCTCCGAAAGTATTCGAACCACCCGCGGTTCGACAGCAGGCCATGGAAGCGATAAAAGCGGGAGCAAAGCTTCTCAGAATCAGCCGCCAGTTCGCCATTCCACTGGCCACGTTGCATCGTGACAAGCAGCGGCTGTATGACAAAGGGATGCTGCCTGCCTCGGTCACCGTACGGCAGCGTAAGGACCGACCAGACGAGGATCAGCGGTTACTCGAGGCGGCCCAACTTGCACTGAATGGTACCCTCTCTCTGCGGCAAGCATCACAGAGCTACTCTCTGTCTAGGACTACGATCTGGCGCAAGGTGCAAGAGTTGAAGGATCCGGCTTCCGCCCAAGGAGCCCCGCAActgtcgaagaagaaaaagatgccaaaaagaaaagcgaagaacAACCAACCCAAAGGGTAA
- Protein Sequence
- MCAMALPVLSATPGMVSGVVWMNHRDHILNTYRAIYESGEYTDCILVLADGALQANSTVLGMASAFLERVFAGASLAASTGQLAVSIPDVTTDDMQQILLFIHTGEVNLRPCHLSSFVEACSLLELRGIKASDGNMMGLAISGSNIVTPQQQADEPLIDLTSTEVPQCLSDLWFQDSETELDTNPPDPDPVLHDHESHITSADETEKIDIAMNALAGGTLETIANYDSITAQESHHMEAEDPSTEGKARHSSLNEPKISGYEERLQAAVDAIANERLSYRKAARAFKIPTTVLWRRAHQILRAPKVFEPPAVRQQAMEAIKAGAKLLRISRQFAIPLATLHRDKQRLYDKGMLPASVTVRQRKDRPDEDQRLLEAAQLALNGTLSLRQASQSYSLSRTTIWRKVQELKDPASAQGAPQLSKKKKMPKRKAKNNQPKG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092927;
- 90% Identity
- iTF_00092927;
- 80% Identity
- iTF_00092927;