Basic Information

Gene Symbol
Kdm5
Assembly
GCA_002846955.1
Location
NJHH01002921.1:19974-26947[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-26 1.1e-22 79.7 0.0 2 89 204 287 203 287 0.94

Sequence Information

Coding Sequence
atgatgaaaagcaaatcTAGATCCGCtacgaacggcagcagcagtggtagcggcagcggtagcggtagcGACAATTACATCAGTAGCAACTATGGGGCATCAGGTGGTGGCGGCGCATCAGGCGACCGAATGACCAGCACATCCGGAAAcatgaacggtggtggcagatTGTCCAGCAACGGCAATCCAGCTGCTCTCAACAACCAGGGCGGTACGGCGGCTGGTGCGATGGCTAGCAGCGGCACTCCCCCATCCACAGGAATGGCAACCGACGAGCAACTCCTAGCATCGGCACACAATCATAGTAACCAACATCCTTGTCATCGTGGTGGAGTTTGTGGCGTCAACAAGCCTCACATCTCGCTGGAAAAATATGACGAGTTCCAGTTCAAGGTGCCGACGGAGGCGCCGGTGTTTGAGCCGTCGGAGGAAGACTTCAAGAATCCGCTCGTGTACATCAACAAGATACGACCGATGGCCGAAAAGTACGGCATCTGTAAAATTCGTCCACCAAGTTCGTGGCAGCCGCCCTTTACGGTGGACGTTGAGAAGCTCACGTTTACGCCACGCATACAGCGCCTGAACGAGCTGGAAGCCGAAACGCGTATTAAGCTGAACTTTCTTGATCAAATTGCCAAGTTCTGCGAGCTTCAAGGGACAACGTTGAAGATCCCGATGGTGGAACGGAAGCCGCTCGATCTCTACACACTGCACAAGATCGTTAACCAGGAGGGAGGCCTGGAGATTGTCACCAAGGAGCGCAAGTGGTCCAAAGTGGCGTGCCGAATGGGTTACCAGCAGGGTAAAAGCGTTGGCTCGAACTTGCGCTCCCACTACGAGCGGCTCCTCTACCCGTTCGATGTGTACCGCTCGGGCAAGGTGGTCGACCTGGCAAACATCGATCCGGACCCAACCGACGACTGCGAGTACGAGCCGCACTGCATCGAGTCACGGCAACAGGTACAACCTCCGATCACCGCCGCTCGTCGTTCTCAACGAtttgcccagcagcagcagcagcagggccagAAAGTGTCACCGAGCAGTAGCGCCGGTGGTAGCATTCGCGCATCGTCCGAAGAATCTTCGCCCGGAAAGAAGGAATTGCGCCACAGAAGCATGATCGAGTTTGCGAGCAAGCTGGCGGCTGCTCGtgatgctgccgccgccaccattgccaATGGTACAGCGAAGGACACAAAGGACGAAAAGAGTGGCAATGGAACGACGGGTACCACTGGGTACGATCCGATGGCAAAGTACATTTGCCACATGTGCAACCGTGGCGATGTGGAGGAgtcgatgctgctgtgcgATGGGTGTGATGCTTCTTATCACACGTTTTGTTTGATGCCACCACTGCATGATATTCCCAAGGGTGACTGGCGGTGTCCCAAGTGTATTGTGGAGGAAAACTCGAAACCCGTCGAGGCGTTCGGGTTTGAGCAGGCACAGCGCGAATACACGCTGCAACAGTTCGGTGAGATGGCCGATCAGTTCAAATCCAATTACTTCAACATGCCGGTGCATCTCGTGCCGACCGAGCTCGTCGAGAAGGAGTTCTGGCGCATCGTTTCGTCGATCGACGAAGATGTGACGGTTGAGTACGGAGCCGATTTGCACACGATGGACCATGGAAGTGGGTTTCCGACCAAATCCTCGCCCTACCTTACGGGTAGTGACCAGGAGTATGCCGAATCGAGCTGGAACCTCAACAATCTTCCCATTCTCGATGAATCCATTCTCGGGCACATCAACGCGGATATCAGTGGCATGAAGGTGCCCTGGATGTACGTGGGCATGTGCTTTGCTACGTTCTGTTGGCACAACGAGGATCACTGGAGCTACTCGATCAACTATCTGCACTGGGGCGAGCCGAAAACGTGGTACGGAGTGCCGGGCAGTCGGGCGGAGGACTTTGAGCTGGCCATGAAATCGGCTGCCCCCGAGCTGTTCCAGTCGCAGCCGGatctgctgcaccagctggtCACAATAATGAATCCCAACATTCTAATGAACGCCAATGTTCCAGTCTACCGTACGGATCAGCAGGCGGGCGAGTTCGTCGTCACATTCCCACGCGCCTACCATGCCGGCTTCAATCAGGGCTACAACTTTGCCGAGGCGGTCAACTTTGCGCCCGCCGATTGGATGAAGATGGGCCGCGAGTGTGTCAACCACTACTCCAAGCTGCGCCGGTACTGTGTCTTTTCACACGATGAACTCGTCTGCAAGATGGCGCTCGAGCCGGATCGCCTGAATCTGGGCATTGCTACCGCTTGCTACATCGATATGGCCGAGATGGTGGACACCGAGAAGAGGTTGCGGAAAAACCTGCTCGAATGGGGCGTATCGAATGCGGAACGAGAAGCGTTCGAGCTGCTGACGGACGATGCCAGGCAATGTGAAATCTGCAAAACGACCTGCTTTCTATCGGCGGTCAACTGTAAGTGTACCAGTAATCTGGCCTGCCTGCGACACTTTGCGGAGCTGTGCGAATGTCCTCCGGAGAACCACACACTCAAGTATCGGTACACGCTGGACGAGCTGCCGCTGATGGTGCAGAAGCTAAAGGTAAAGGCTGAGTCGTTCGAAAAGTGGCTGTTTAGGGTGCGTGACGTGCTCGATCCGTCGGTGCCGAGTACCATCACGCTTGAAGAGCTCCAGAGCATTGCACACGAAGCGGAGAGCCAAAAGTTCCCGAACAGTGTCATACTGGAGCGGCTGAACCTGTCCATTCTGGAGGCACAAAAGTGCATCACCGTCATTCAACAGCTAGACATCAACAAAATACGAACGCGTACGAGAAACTCGCTCGAGTGTGCAAAGTACAAGCTGACCATGGATGAGCTGGAACTGTTCATCAACGAGATCAACGCGCTGCGGTGCGTTATCCGCGAGGGGGATAGTGTGCGGGAATTGCAAAGGATTGGCCTGGAGTGGTTGCGGCAGGCAGATAAAGTGCTGAAGCTCCGGTTTAAGGACACGAACGTACAGCAACTGAATCAGCTGATCGACGAGGGCAGTGCCTTGTGCATCGAGCTGCCACAGATCATTGAGCTGCGCGATCGGTTATCCCAGTACAAGTGGTACCGGCAGGTACGAACACTGCGTGAAAATCCGGTCGATCGGCTTTCCCTcgaggagctgaagaaggtAGTCAACGAAGGAATGCAAATTCGTCCGCACACAGTATTAGAGAAGGAGATGTCTCTGCTGCATGGAGTTATGCTTCAGGTCGTTGATTGGGAAGAGTCCGCTAATCAATGCTACAAGACGGAAACGCAACACAAGATCAGCGAAATCGACGGTTTGCTGGAGAGGGCACAGAACATCGAAGCGTATCTGCCGCTCGCAGCACAGCTAAAAGATGTGCTTAACAAAACGAAGGAATGGTTGCACGCGATAGAAACAttggaaagcagcaaaaactaCAATTCGTTCCACACACTGCAAAATCTGGCCAATCGGGCAAAAATGTTGCCCGTTGAAGTGGAAAGCAAGCTACTGTGCGAGACGATCCTCGGCATGACAGCGGCCAGTAGCGGTAATGGCAGCGGTGGTAGTTGCTACAATCGGAACGGTGGACAACGGTTACTGTTTAACTCGATGGGCTTTATcggagcgagtggtggtgctatTGGTGGAGCGGCAGAGTGCGATAGCAAAGCTGAGTCGGCAGCGTCGTTAAAgcgaaaacggaacggttcgaTCTCGGTCATCCTCGGAGAAGATCAACCCCTGGCGGGCAGCATGGAAatggtgatgaagaagatCAAGGAGGACAATTGTATTGGGGAGCATGATAAGCGCTTGTTACGCGCCAAGCTGATGCCCGGATGGAACGATATCGTTGATAAAAGCAATATCGGTGGTGGGcggcgaacgatcgaatgcaATGACGATTCCAagagcagcggtagcagcgaCAGTGTGATCTATCACTGTGCCAAGTGCTACGAAATGGTAACGAAAGCAAACGCGTTGCGGAGGTACCGACGCAAACAACGCCACCATTGCCGGCATCACGAGCGACACCAGGCACGCTGTTTCAAGCAGGAGCCAAGGTTATCGCCAAAATTGTCTCAAGCCGATCCTCAGCAGCAGGTGTCCTCCTCACCGTTGAACAACAATGGCAGCATATCGTCGTTGGAGCAACTGCTGCAAACTAAAACGCTCGGCACCGAAGACTTTACGTGCGATGGGCGGGTCACCAGTAGcagttttgatgatttttcgcTAAAGTTCGATGAACACtatgacgaggaggaggaagaggaggaggaagaggaacaggaggaaggggaggaggcCGACGATGATGCGGTGGATGATGTGAAAGAGGAAGTGGAGGATGAGGAAAATGAGGGTGATGTGGGTGAGAATGGTTGCCGCCATGGTTGCAAGCCTcccgatgacgaggacgacgacgatgacgatgagcagAAACTcggaactggtggtggtgacatgAACGGTTACTGGAAGTCCAAGGTGGAACCATTTGAAAAGGACCACCAAACGacaaaaagcgaagaaaaggaggaaaatgataGGGTTAATGTAGAGGCTAAATCACGCAATGGAACAAAAGGCACGTCgtcagcaacatcatcttcgacaacagcaacaacagcagcaacatcaccgtGTTCGTCGACCACGGCGACAGCGGTAGTCAGTACCGAGAGTTCTAGTCAATCGTTTGAATGTTCGCTCCCAGGCGTTAGTCGTAATGTATCTCATTCAAATggtaaaaacaacaacaatggtggtAGTACTGCGATggcctaccagcagcagcagcagcaggagaaaagGGACcaggaacaacagcagcagtccagtAATCATACGCCCGGCTTATGA
Protein Sequence
MMKSKSRSATNGSSSGSGSGSGSDNYISSNYGASGGGGASGDRMTSTSGNMNGGGRLSSNGNPAALNNQGGTAAGAMASSGTPPSTGMATDEQLLASAHNHSNQHPCHRGGVCGVNKPHISLEKYDEFQFKVPTEAPVFEPSEEDFKNPLVYINKIRPMAEKYGICKIRPPSSWQPPFTVDVEKLTFTPRIQRLNELEAETRIKLNFLDQIAKFCELQGTTLKIPMVERKPLDLYTLHKIVNQEGGLEIVTKERKWSKVACRMGYQQGKSVGSNLRSHYERLLYPFDVYRSGKVVDLANIDPDPTDDCEYEPHCIESRQQVQPPITAARRSQRFAQQQQQQGQKVSPSSSAGGSIRASSEESSPGKKELRHRSMIEFASKLAAARDAAAATIANGTAKDTKDEKSGNGTTGTTGYDPMAKYICHMCNRGDVEESMLLCDGCDASYHTFCLMPPLHDIPKGDWRCPKCIVEENSKPVEAFGFEQAQREYTLQQFGEMADQFKSNYFNMPVHLVPTELVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSPYLTGSDQEYAESSWNLNNLPILDESILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSRAEDFELAMKSAAPELFQSQPDLLHQLVTIMNPNILMNANVPVYRTDQQAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWMKMGRECVNHYSKLRRYCVFSHDELVCKMALEPDRLNLGIATACYIDMAEMVDTEKRLRKNLLEWGVSNAEREAFELLTDDARQCEICKTTCFLSAVNCKCTSNLACLRHFAELCECPPENHTLKYRYTLDELPLMVQKLKVKAESFEKWLFRVRDVLDPSVPSTITLEELQSIAHEAESQKFPNSVILERLNLSILEAQKCITVIQQLDINKIRTRTRNSLECAKYKLTMDELELFINEINALRCVIREGDSVRELQRIGLEWLRQADKVLKLRFKDTNVQQLNQLIDEGSALCIELPQIIELRDRLSQYKWYRQVRTLRENPVDRLSLEELKKVVNEGMQIRPHTVLEKEMSLLHGVMLQVVDWEESANQCYKTETQHKISEIDGLLERAQNIEAYLPLAAQLKDVLNKTKEWLHAIETLESSKNYNSFHTLQNLANRAKMLPVEVESKLLCETILGMTAASSGNGSGGSCYNRNGGQRLLFNSMGFIGASGGAIGGAAECDSKAESAASLKRKRNGSISVILGEDQPLAGSMEMVMKKIKEDNCIGEHDKRLLRAKLMPGWNDIVDKSNIGGGRRTIECNDDSKSSGSSDSVIYHCAKCYEMVTKANALRRYRRKQRHHCRHHERHQARCFKQEPRLSPKLSQADPQQQVSSSPLNNNGSISSLEQLLQTKTLGTEDFTCDGRVTSSSFDDFSLKFDEHYDEEEEEEEEEEQEEGEEADDDAVDDVKEEVEDEENEGDVGENGCRHGCKPPDDEDDDDDDEQKLGTGGGDMNGYWKSKVEPFEKDHQTTKSEEKEENDRVNVEAKSRNGTKGTSSATSSSTTATTAATSPCSSTTATAVVSTESSSQSFECSLPGVSRNVSHSNGKNNNNGGSTAMAYQQQQQQEKRDQEQQQQSSNHTPGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00098258; iTF_00091963;
90% Identity
iTF_00098258;
80% Identity
-