Aali007738.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- bys
- Assembly
- GCA_013758885.1
- Location
- NC:15125549-15137442[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 1.8 84 3.3 1.2 3 23 1093 1115 1091 1115 0.87 2 9 0.5 24 5.0 4.7 1 23 1154 1178 1154 1178 0.95 3 9 1.5 70 3.5 0.3 3 23 1196 1218 1194 1218 0.85 4 9 3.6 1.7e+02 2.3 0.8 3 19 1226 1242 1224 1242 0.84 5 9 5.5e-06 0.00026 20.6 0.3 1 23 1254 1276 1254 1276 0.98 6 9 0.00071 0.034 14.0 0.2 2 23 1281 1303 1281 1303 0.97 7 9 0.00031 0.015 15.1 1.2 1 23 1309 1331 1309 1331 0.97 8 9 0.0019 0.09 12.6 0.5 1 23 1337 1361 1337 1361 0.98 9 9 0.0016 0.074 12.9 0.7 1 23 1368 1391 1368 1391 0.97
Sequence Information
- Coding Sequence
- ATGGGTAAATCGAAAGCACATCGCATCAAGACCATCTCGGGACCGAAGGCATCCCTTGGTGACCAAATCAATGAGGGCCGAGTGTCGAAAAAGTCTAAGCAGCCGAAGGTGCGGATGCGAGCGGAGGAGCAAGAGTTTGTTGACTCGAAGATTTCGAAGAAAATTCTTCGAGAAGCTCGGAAACAGCAGGCCGAGCTGAACCTGTTCGGTGAATCCTTCGGACCATCACTGACGGACTCGATGGCCGTTAAGAAGCGACATCGGCTGGATGATAGAGCATCGTCGGATGAATCGGATTGCGAGGGAGGCGATGCAGCTGATATCGACGGAGATGACCTGTTTGATGATATGAAAGTAACGGAAGAGGATGAGCGGGCACTGGCCATGTTCCAGAACAAGGATGGAACGAGAACTCGCACGTTGGCCGATTTGATTATGGATAAAATAACCGAGAAGCAGACGGAAATACAGACGCAATTCTCCGACAACGGTTCACTGAAGATGGAAGAGATCGATCCGCGCGTTCGCGAGATGTACGAAGGCGTGCGGGACGTGTTGAAGCGCTATCGCAGTGGCAAGATACCGAAAGCATTTAAGATTATTCCGAAGCTACGCAACTGGGAGCAGTTCCTATATCTGACGGAGCCACACAATTGGAGCGCGGCCGCTATGTTCCAGGCGACGCGGGCCTTCTCGTCCGGTCTCACGCAGTACATGGCACAACGGTTCTACAAcctagtgctgctgccccgTGTTCGCGACGATCTTGCGGAGTACAATCGGTTGAACTTTTACCTCTACCGAGCGCTCAAGAAAGCGCTGTTCAAACCGGCGGCCTTTATGAAGGGTATTATTCTGCCGCTGTTGGAAGCGGGCGATTGCACGCTGCGTGAAGCGATCATCTTTGGCAGCATCATAAGCACGACACGGATCCCGGTGCTACACACGTCCGCCTGTTTGCTGAAAATCTGTGAAATGGAATACTCTGGAGCTTGTTCGGTTTTCATTCGCATCATTCTGGATAAACGGTACGCACTGCCGTACCGTGTGGTAGATGCCACGGTATTTCATTTCCTGAAGTTCGAGAATGACAAACGCGAGCTGCCCACCCTCTGGCACAAGGCGCTGCTAACGTTTGCCCAGCGTTACAAAAACGACATCTCTTCCGAACAGCGTGAAGctttgctgcttttgttgAAGAAAAAGTCGCATCCCAAAATTACGCCGGAAATCAGAAGAGAACTCATGGCCGGCCAATGTCGGGATGTGGAAACGGGCCAAAGCCTGGCACACGAGAACGATATTGAGTTCCAGGAAGACAACGACTACACACCGATGGACGATGATACGGAAGCACACGGCTCTCGGAGTACGCCTGGAAAAGGAGGTAAAGAAGTGCAGGATGAAGAAATGGAGAGTGACGCAGACGATGCCGACGAGGAGAgcgacgatgaggaagaagatgatttGTCTGGACTTAAGGTTTCGCTACTTATCACAGTAATGGCCGGATTGAACGATAACCCGTTCGGGGAGCCGGAGATTGACAATCCGTTTGCGGATCCATCGATACAGCAGATAACGAGAAACACCACCAGCCTACAACAGACGCTCGATGACTATCGGCCGTTCGATAATGATCGCAATGTGCTGGGTGCCAACGGCGCCAATCAACCGGCCACACTACACCCGTCCACACAGTCCCCTCCGGTGTACAACCAGAGTGGGGCCCAGTACCAGACGAACAGTAATGGTGCCGGACTGGGGCCGGCTGGCGTTCCCGATGGCGGAAGTAAAACGCCAGGAATGACGCAAATCTCCACCGCGGAGCTTGAGCGAGCCCAGGAGGAGTTGGAGCGTAAAACGAGAGAACTGGAGCGTCGGGAGGCGAACATGACGCGCAGTTCGAACGAACTACCCAACAACTGGCCTCCGTTACCATCGATGTGTCCGTTTTCGCCCTGTTTCTACCACGACATCAACGTGGACATTCCGGTTGACTTTCAGCGCGTTGTACGGAATCTGTACAAACTGTGGATGTTCTACGCGTTGGTTATGGCGGTCAACATTCTGGGCGGTCTGGTGATACTGATCCATTCGGGCGAGTTTCGCACGTTCGGTCTTGCAATTTTCTACGCATTGCTTTTCACCCCTGCCTCCTTTATGTGCTGGTATCGTCCGGCCTACAAGGCGTTCAAGACGGACTCGAGCTTCAACTTCAtggtcttcttcttcatcttctccttccaaGCGCTAGTGACCGCTATCCAGACGATCGGTTTCCCCGGCTCGGGAACGTGTGGCGTGATCATGGCCATTAAACAGTTCAGCTCTGGCTGGGGTATCGTCGTCGGTCTGTTTTTGATGGGCATAGCGATCGGTTACGGTTTGTGTGCCGCCGGTAACATCTTCATGCTGACCAAGATACATCAAATCTATCGCTCTGGTGACAATATGTCGATGAACAAGGCGCGCGAGGAATTCCAGACCCAGTTCTTCGGCAATCAGATTGTACGGGATGcggccgccggtgctgctcgtgcctCCgccgccgccgccgccgccgccgccatacAACACAAGGAAAAGACGAACGAAAACATTACGTTAATTACCGCTTATTCGGTCACGAACCGCAGTGCCATCACTTCCAGCGCTTCAGTCGAAGGTTTCCTCGAAACGAAAGCGCGGAGAGCCTTCAATGACGTCGCggatggtttgtgttttgttttgagcgCAACCGCGcattccgctcgctcgcgcctTCGGTTCGTTTTCAGGTTTTCCTGTGGTCGCTCCAGGAGTTATGGTAAAATGggaaaaccaaatcaaaagcgaaaacagcgAATTCGCGGCGAGAATGAGCAGAACGACGAAAAGAAGTTTAAAGCGATGGAGCAGGAGGCAGAGATAGGCGAACCGAAGGAAATCATTTCGGACGATACCGTAAGGGAAGAGGGCTCGCAGGATGAAGTTCACCCGAAGGTGCAAAAGTGGATGCAGGAGCAACAACCGTACCTGGAGAACGGTTACGATGAGATCGAAGAGTATATTACGGAGGAAAATGAGGAATCACCACCTGTGCTGCCCGAGGACACGGAGATATTGCTGCGTGAAAGGCTGAAAAACTATAGCGAGGAAGAAAAATGCCAGAGCATCAAGTACGAGTGTGAATGGAACAAGTGCCAGTATCTGGCCGGGCACGATAGGAAGTACTTTCTGCACGTCGAACAGCACGCCACAGAAGCGATTACGAACGATGGGGGAAGCTACGATTGTTGCTGGGATTTGTGCGACTTTGTCGCTAAAACCAAGGACGATTTGATGGGCCACGTGCACTACCATGGTTACCATACGAAGCTGAAGGTGCATGGTGCTAGCTTGACGTTCTTGCTGAAAATCCCCGCCTGCAGCTACGACAGTCGAACGCGAAATACGATCTCGACGCGCCCGACAAGCTTCTGCTGTGAGTGGGATGGTTGCGGACAACGGTACAACAAGGCGATGCACTACTTTCACCACGTCGACACACACATCTTCGATCTCTTCACGCCCGGGGTGAAAAGTACCAAAGAGCCACATCGTTGCCTTTGGCCGGCCTGTAACGAGAGCTTCCGGGAGCGATGGAAAGCAGTAAGACACATCAATGCGCACACCGGTCGGAGGGCCCTGGCTTGCTATAACTGCGGCGAAATGTTCAGAGAGCGCTGCAAGTATCTGGACCACTGCCATCGGCAGATTGAACTAGCGGATCGAAAATACCAGTGCCCGGAATGTGACCGGTTTTATGCTACCCAAAGATTGCTGAAGGCTCATCTAGCAAAGCATACGAAAAATGCGCAGTGTACGCTGTGTCCGCTCAGTTTTCCCTCAATGGCCACCCTTTCACGGCACATTCTCACTCGCCATATAAAGGACCGCCCTTTCGCCTGCAACCAGTGCAGTTACCGTTCGGTGACCAAGTACGAGCTGGAGAAACACCTCCAAACCCACAGCACGAAAAACGTTTACCGATGCTCCGAATTTGGCTGCAACGTGGTGTATAAGAGTGAATCGTCCATCAAGCGACACATCAGCATGCACTACAACCGGCCGGTGCACTACGAGTGCCATATATGCTCCAAAAGCTACAAAATCGGATGGTCGCTCTCGAAGCACTTGGCCACTGTCCATAAGGTGGAGCGATTGTACGGCCATACCCGGTTTCGCTATAAAATCGACACTGATGGGGTATTTCGGCTAGCGAGCTATATTGATGGGCGCGATAAAAAGAGTGGCATGGTAAACGTTCCGCAAGAATGTGTCGATACTGCATCGCCACCTGGGTGCACCGTGGAGGAAGTGTCGCAGGAGACGCTGCGTGAGAAAGACGCAGCTGGTGATGGTTCCATCAAGCTACTCAACGTAAAGCCTACGATCAGTACCATCACACCGAAGGGTAATACATTCCTAGTGGAGCTGTCGTTGCAACCGGATAACGAAACAACAGATGATAAAGAAAGCGATTCCGTGCAAGCGAGTGAAGACGTCGTTGAAACGTTACCGAAACAAGAGAAGAACCAGGCGATATCGTCGTCCGTAGATAAGGAAGAGAGCGCTAAACAAGACGACGGCAGCCAAACCTCCGAGGTGAAGCTGGTACAAGATTTTACAGTCATGAGACGATACTTGAAGTTCagcaaaatgccaaaaataAATGGTAAATCAGGTGATTAG
- Protein Sequence
- MGKSKAHRIKTISGPKASLGDQINEGRVSKKSKQPKVRMRAEEQEFVDSKISKKILREARKQQAELNLFGESFGPSLTDSMAVKKRHRLDDRASSDESDCEGGDAADIDGDDLFDDMKVTEEDERALAMFQNKDGTRTRTLADLIMDKITEKQTEIQTQFSDNGSLKMEEIDPRVREMYEGVRDVLKRYRSGKIPKAFKIIPKLRNWEQFLYLTEPHNWSAAAMFQATRAFSSGLTQYMAQRFYNLVLLPRVRDDLAEYNRLNFYLYRALKKALFKPAAFMKGIILPLLEAGDCTLREAIIFGSIISTTRIPVLHTSACLLKICEMEYSGACSVFIRIILDKRYALPYRVVDATVFHFLKFENDKRELPTLWHKALLTFAQRYKNDISSEQREALLLLLKKKSHPKITPEIRRELMAGQCRDVETGQSLAHENDIEFQEDNDYTPMDDDTEAHGSRSTPGKGGKEVQDEEMESDADDADEESDDEEEDDLSGLKVSLLITVMAGLNDNPFGEPEIDNPFADPSIQQITRNTTSLQQTLDDYRPFDNDRNVLGANGANQPATLHPSTQSPPVYNQSGAQYQTNSNGAGLGPAGVPDGGSKTPGMTQISTAELERAQEELERKTRELERREANMTRSSNELPNNWPPLPSMCPFSPCFYHDINVDIPVDFQRVVRNLYKLWMFYALVMAVNILGGLVILIHSGEFRTFGLAIFYALLFTPASFMCWYRPAYKAFKTDSSFNFMVFFFIFSFQALVTAIQTIGFPGSGTCGVIMAIKQFSSGWGIVVGLFLMGIAIGYGLCAAGNIFMLTKIHQIYRSGDNMSMNKAREEFQTQFFGNQIVRDAAAGAARASAAAAAAAAIQHKEKTNENITLITAYSVTNRSAITSSASVEGFLETKARRAFNDVADGLCFVLSATAHSARSRLRFVFRFSCGRSRSYGKMGKPNQKRKQRIRGENEQNDEKKFKAMEQEAEIGEPKEIISDDTVREEGSQDEVHPKVQKWMQEQQPYLENGYDEIEEYITEENEESPPVLPEDTEILLRERLKNYSEEEKCQSIKYECEWNKCQYLAGHDRKYFLHVEQHATEAITNDGGSYDCCWDLCDFVAKTKDDLMGHVHYHGYHTKLKVHGASLTFLLKIPACSYDSRTRNTISTRPTSFCCEWDGCGQRYNKAMHYFHHVDTHIFDLFTPGVKSTKEPHRCLWPACNESFRERWKAVRHINAHTGRRALACYNCGEMFRERCKYLDHCHRQIELADRKYQCPECDRFYATQRLLKAHLAKHTKNAQCTLCPLSFPSMATLSRHILTRHIKDRPFACNQCSYRSVTKYELEKHLQTHSTKNVYRCSEFGCNVVYKSESSIKRHISMHYNRPVHYECHICSKSYKIGWSLSKHLATVHKVERLYGHTRFRYKIDTDGVFRLASYIDGRDKKSGMVNVPQECVDTASPPGCTVEEVSQETLREKDAAGDGSIKLLNVKPTISTITPKGNTFLVELSLQPDNETTDDKESDSVQASEDVVETLPKQEKNQAISSSVDKEESAKQDDGSQTSEVKLVQDFTVMRRYLKFSKMPKINGKSGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -