Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:3633045-3638048[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.37 18 5.4 0.3 2 23 259 279 259 279 0.95

2 9 0.03 1.4 8.9 0.6 1 19 293 311 293 314 0.94

3 9 1.1 54 3.9 0.8 1 23 404 426 404 426 0.91

4 9 5.9 2.8e+02 1.7 1.5 1 23 430 454 430 454 0.89

5 9 6.6e-05 0.0031 17.2 1.1 1 23 479 501 479 501 0.99

6 9 8.2e-06 0.00039 20.1 1.3 1 23 507 529 507 529 0.97

7 9 7.9e-06 0.00037 20.1 3.2 1 23 535 557 535 557 0.99

8 9 0.038 1.8 8.5 0.7 1 23 563 585 563 585 0.80

9 9 5.2e-05 0.0025 17.6 7.7 1 23 591 613 591 613 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.37	18	5.4	0.3	2	23	259	279	259	279	0.95
2	9	0.03	1.4	8.9	0.6	1	19	293	311	293	314	0.94
3	9	1.1	54	3.9	0.8	1	23	404	426	404	426	0.91
4	9	5.9	2.8e+02	1.7	1.5	1	23	430	454	430	454	0.89
5	9	6.6e-05	0.0031	17.2	1.1	1	23	479	501	479	501	0.99
6	9	8.2e-06	0.00039	20.1	1.3	1	23	507	529	507	529	0.97
7	9	7.9e-06	0.00037	20.1	3.2	1	23	535	557	535	557	0.99
8	9	0.038	1.8	8.5	0.7	1	23	563	585	563	585	0.80
9	9	5.2e-05	0.0025	17.6	7.7	1	23	591	613	591	613	0.97

Sequence Information

Coding Sequence: ATGGACTCGATAGAATCCCTGGAGTTATCGGTTACGCCCGAGGAACTTTGCCGGACCTGTCTGGCTGCGGTCGATCGGAACCAACTTAAACCGATCTTTTGCAGCGAAATCCTCGACGGTAAGATCGTCCCTTTTCCAAAGGTGATCCAGCTGGCCACAGGAGAAGAGTTGGTCCGGGATGAAAAATTACCGAGCGGCGTGTGCGTGGAGTGCAAAGTGAAACTACGCGATCTGTTCATCTTCGTCACGAAGGTTCGCAATTCGAAAAATCTGCTGTACGACATCTTCAACGTCGCCAAACCGGAAGCGAAGCCAATCGAAGGAGGCGTCAATGCAGCGACAAAAGTCATCAAAAAATGTGCCGAAGTTCAAACGGATGCTAGCGGACCGGTCCGAAAGCTCCGAAGCTCCCGACAGCTGGTTGAAAGGGGAACGCAGTGTGACGATAATTCTACCGTACGCACCAAAATTCCGGCAGCGGTCTGCAATgtgcaaacacaaaccaacggCGAGCAGGATGGAGTGGTGGCTAGCGGCGAGTCCCATCATCGTCTGGAGCTAATCCAAACGTTCGCGGGAGAGGAAGTCACTCTGAATGGCGGCGATGAGGAAGATTGTGTATCCGACATCGAAGAACTTCTACAGGGCGAGAACACGCTTAAATTATCTAAAGCCCCTGGCGATAGATCTTCATTTAAAGAGGAGCAGCTAGACAGTGCGGACAGCAGTGCCGAGGAGCTGAAAAAAGGTGCCGTAATTGAGAAAAAGCGGGAAACATGCCTTTACTGTAACTACACGGCACAGTCTGCTACGTTTGCGAAGCACCTTCTCGTTCATCAGCAAACACTGGAGCTATGCTTTGAGTCTATCGAGTACTACCGCTGTGGCAACTGTTTCACCGTGTTCATGTCCCAGGAGCACATGGAGGAACACTTCGAGAGTAGCTGTTCGCCCGTACAATCGAATGATATCGTGAAACACGTAGATTTGAGCAAGCACGAGTCGTTCTATCAGAACGGGGTGGATATGTGTGTACCGAAGTTCAAGACATTCACCAGTGCCGGTGATGGGATGTATCGTTGCTTCCGGTGCGCGACCGTAGTGGATGATTTTGATGCGATACGAGCGCACTGCACTGAGCACGATCtggtcgacgatgatgagacCGATGTCGACCAGATATGGGAGACAAACCAGTTCGATACGGTCCACGTGTGCGGGGTGTGCCAAGGCCAATTTTCGGACGCCACATTCATCCGGCAGCACGTCTACTTCCATCAGACCTCGTACTTCTGCATGTACAACTGTGAGCACGTTTCCGACGATTTTGGCCGTTTGACAAGACACCTGCAGGCGAAGCATTTTACAGCTCCGGAACTACAGGCGTCCAACTTCACTGGAACCGACGAGCAGCAAAGTGGCGCAACACAGGCCTATAAATGCGAACACTGCAAAAAAGTATTAGGCAGTGAGGCTGCGTTGCGGAAGCACGTGAAAAGCCATGCCCGCGAACGGAAGTTCGCCTGCAGCACCTGCTCCAAACGGTTCACGCAGAAGGGCGATCTGGTGACGCACAAGCGGATACACACGAATGAGCGACCTTATCGGTGCATGATTTGTGACAAAGCGTTCCGCACACTAAGCCACCGGCGGGATCACATGTCGACGCATGCCGAGGATAATAAGTTCGAATGTGAGGTGTGCCACAAGAAGTTCAAGGCTGCCCGGATACTCGCTGGCCATCGTCAGCTCCACACCGGCATAAGACCGCATACCTGCGAGGTGTGCTCTAAAACGTTCGCTCGAAAGCACCACTTGAAGCAACACTCGCGAATACACTGCAAACAATGA
Protein Sequence: MDSIESLELSVTPEELCRTCLAAVDRNQLKPIFCSEILDGKIVPFPKVIQLATGEELVRDEKLPSGVCVECKVKLRDLFIFVTKVRNSKNLLYDIFNVAKPEAKPIEGGVNAATKVIKKCAEVQTDASGPVRKLRSSRQLVERGTQCDDNSTVRTKIPAAVCNVQTQTNGEQDGVVASGESHHRLELIQTFAGEEVTLNGGDEEDCVSDIEELLQGENTLKLSKAPGDRSSFKEEQLDSADSSAEELKKGAVIEKKRETCLYCNYTAQSATFAKHLLVHQQTLELCFESIEYYRCGNCFTVFMSQEHMEEHFESSCSPVQSNDIVKHVDLSKHESFYQNGVDMCVPKFKTFTSAGDGMYRCFRCATVVDDFDAIRAHCTEHDLVDDDETDVDQIWETNQFDTVHVCGVCQGQFSDATFIRQHVYFHQTSYFCMYNCEHVSDDFGRLTRHLQAKHFTAPELQASNFTGTDEQQSGATQAYKCEHCKKVLGSEAALRKHVKSHARERKFACSTCSKRFTQKGDLVTHKRIHTNERPYRCMICDKAFRTLSHRRDHMSTHAEDNKFECEVCHKKFKAARILAGHRQLHTGIRPHTCEVCSKTFARKHHLKQHSRIHCKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -