Aali009602.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles albimanus
Gene Symbol
Znf784
Assembly
GCA_013758885.1
Location
NC:84903671-84906783[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.3 14 5.7 0.6 2 16 202 216 201 221 0.85
2 15 0.00042 0.02 14.7 1.2 1 23 235 257 235 257 0.98
3 15 1.1 50 4.0 5.4 3 23 416 436 415 436 0.90
4 15 0.0022 0.11 12.4 1.0 1 21 450 470 450 471 0.87
5 15 0.034 1.6 8.7 2.0 2 23 527 549 526 549 0.96
6 15 3.3e-05 0.0016 18.2 0.2 1 20 566 585 566 587 0.95
7 15 2.3 1.1e+02 2.9 0.7 1 20 602 621 602 626 0.82
8 15 2 93 3.2 0.0 1 20 695 714 695 716 0.94
9 15 0.56 26 4.9 0.0 2 23 723 744 722 744 0.94
10 15 0.00086 0.041 13.7 5.1 1 21 750 770 750 772 0.95
11 15 8.5e-06 0.00041 20.0 1.7 1 23 777 800 777 800 0.96
12 15 1e-06 4.7e-05 23.0 0.9 1 23 805 827 805 827 0.99
13 15 2.3 1.1e+02 2.9 0.2 1 23 833 858 833 858 0.92
14 15 9.5e-05 0.0045 16.7 1.1 1 23 864 886 864 886 0.98
15 15 0.00014 0.0066 16.2 0.1 1 20 892 911 892 913 0.94

Sequence Information

Coding Sequence
atggaaaattcagCTGGAGATGGAAGCTCTAGTGTGGTTTTATGGTGCAATTCATGGGCCGTTAAGGTTTGTCGGATCTGCAGCAAACCGGACAacgatgatttcatttcagtGCGGctggtccagcagcaggtgtcGATCGCCGAGAAAATCTTCGCGATATCGGGCGTCGAGGTGATGAAAGATCGACGACTGCCTCAAAACATTTGTCTTAAATGCCTCGATCGAGTGAACCAAGCGTTTGAGCTGAGGCAACAATGTATCCAAGCGGATTCTCGCTTGTGCGAATCGCTCCCAGATAACAACAAACTGTCTGCCGGAAGCCCACAACACGCCGGAATCGTCGAGTTTCTGGAAGAACCGGCTGGAGAGCAGAGTTCATGTAAGGCGGATGCAGAAGAAGACTACGAGGAAGGAGATCCCGAGGAGCAAGATTCCTCCCTAGATACCCTTGTGGCGCAGAGCGACACGATCTCGGAACATGCAGTCAACTCATTCCAAACACAGCAGGTGATTCCGAATCAGACGCATACTATTCGACAAAATAGCGCCTGGAGGCTAGTACATCGTAAGCAAAGACGGCGCTCCAAGTACCGTATATGCCAGTGCCCGGTTTGCTACAGATCTTACACGAGCGAAGAGGGTTTAGCATTTCACTACATAGATTTTGACCGAAAACACCCGGCCATTGGTGGTGATCTCTACCAGTGTCTCATCTGCAACCAGACTCTCAAAACACACGACACGTTGCTTGCACATTTGGAGCGTCATGAGGAACTGTGCGAAAATAATGTGGAGTCTATACCAAAACTATCGATAACATCTTCCGATGTGAGCGATCTTCGCATAGAGATACAAGCACCCCACAACGAAAAGCCAATGGAAGTGGATGGTGAAGCGACAGAAAACATGGCCCGATCGGTAACGATCGAAACACTGGACGAGGAATATGCCACAGACGAAGAATATTTGGAACTGGATGATGGAGGAGGAAACGAGGAATCTGAAGAGTATGAACCTTTCCAAGACGAGGTGGATGTGGACAGCGAAGTTGGTTATGGTTACGAGGACGAAGTTGCTAGTGATTTGAAAGGGAAAACGTATAGACCTCAAGTGTCGAAAGCAGTACGTTTgaagagcaaacagcaaagtGTCTTGCAGCGTGTGTTACAAATTCCTGAAAAGTATCGTCGAATTGTAGCTGATCAGAAGACGTACATGATCGTTGAGCTATTGCAtgagcgttgctgctgctgtgcaaagTTCTTTACCACTGATCAACAGCTGCAGGAGCACATGAAGGAACACCTAGAGAAACATTCTCGAGAGCAGAATACAACTTGGAAATATCGTTGCGAGTATTGCGGGAAAGCATTTAAATTTTCTATTACATATACTTTTCACTTGCGCATTCGGCAGCGGCGTCAGTTTTATCTGTGTGGACTCTGTAATCTTGTTATGGACACAGAGAAGCGCATGAAATCGCATATGCTTCGTAACGAGCAGCATGCCAGCTTCTTCAATTTAACACGCGCAGGCGTTAGTGATCAGTACTATGTAGTCGTGCTGACcggcattcgttgctgcagaTGTAGAACTTACTTCGAGAGATATGAAGACTTCAATGAGCACATTCGCGTAATTCATAGCCAACAGCTGCTAGCAGAAAGCCGCCACACAGTAGAGACCCATCCGTTCAAATGCGGTGTATGCAAGCGACGCTTCACTCGAAAGgccctgctcgagcagcatttGGCCGTTGGGACGATCAAAACAGAGGAAAGCACACGCAGTTTCGTCAAGTACTGCTGCAAGTTGTGTGACTATTCGACGTATACTATTGAACGCATCGAGGCCCACTTATACGGTGCCGTCCACAGTGATGAGCTGGCAAAGGTGCACCTGGAGCCACTGAACAATGATTTCAAAAGGCTGGACACGATTTACCACTGTTGCTCGCCAGAGTGCAAAAAATCATTCCTTGACACAGAAATCCTGCAGGACCACTTCCGTGACTGTCACGCGGAAACTCTGGCCGCAAACCAACGTGCCAACAGCGAGCAGGAGTCAAAACAGGGAGCGTacgaatgttttatttgtgCGGTGAGATTGGAGAATTTAAATGCCCTAAGGGACCATCAGGCGCAACGTTCGCCAAAAAACTGGATCTGTACGATATGTGGTATCAAGAAACCGTCTCGATCGGCAATGTTAGCCCACGAACGATTGCACACCGGCGAACGACCTTATCGTTGCGAGTTGTGCGATAAAGCTTTCTCTAGTTTGGGCTGCCTTCGATCGCACCAGAAATGCCACGTTCCACGGCAATACGAATGCACCACGTGCAAAGAGCAATTCGCGAGGCTTGAAAATCTCAAACGACACATTCGATTTAAACATGGTGAGGCGACGTACCAGTGTGAGGTTTGTACGAAGATGTTCAAGACACGCGAGAAGCTCTCCATCCACATACGGATCCACACGGGCGAGAAACCGTACAAATGCCGGGCGGAGGGTTGCGATCGATGGTACACGAACACTGCGGATCGAAGGCGTCATGAAATGGCTGAGCATACACGGGAACGCCCTCATCAATGTGGATATTGTGAGGCGGCTTTCATTCGCAAACGACAACTGATGATCCACGAACGCCGTCATACTGGTGATCGACCATATTCCTGCCTAGTGTGTGGGAAGTCATTTGTCGAAGCGACAGCGTTGCGAAGGCATACCGATAAAGTGTGCTCTTTCTAG
Protein Sequence
MENSAGDGSSSVVLWCNSWAVKVCRICSKPDNDDFISVRLVQQQVSIAEKIFAISGVEVMKDRRLPQNICLKCLDRVNQAFELRQQCIQADSRLCESLPDNNKLSAGSPQHAGIVEFLEEPAGEQSSCKADAEEDYEEGDPEEQDSSLDTLVAQSDTISEHAVNSFQTQQVIPNQTHTIRQNSAWRLVHRKQRRRSKYRICQCPVCYRSYTSEEGLAFHYIDFDRKHPAIGGDLYQCLICNQTLKTHDTLLAHLERHEELCENNVESIPKLSITSSDVSDLRIEIQAPHNEKPMEVDGEATENMARSVTIETLDEEYATDEEYLELDDGGGNEESEEYEPFQDEVDVDSEVGYGYEDEVASDLKGKTYRPQVSKAVRLKSKQQSVLQRVLQIPEKYRRIVADQKTYMIVELLHERCCCCAKFFTTDQQLQEHMKEHLEKHSREQNTTWKYRCEYCGKAFKFSITYTFHLRIRQRRQFYLCGLCNLVMDTEKRMKSHMLRNEQHASFFNLTRAGVSDQYYVVVLTGIRCCRCRTYFERYEDFNEHIRVIHSQQLLAESRHTVETHPFKCGVCKRRFTRKALLEQHLAVGTIKTEESTRSFVKYCCKLCDYSTYTIERIEAHLYGAVHSDELAKVHLEPLNNDFKRLDTIYHCCSPECKKSFLDTEILQDHFRDCHAETLAANQRANSEQESKQGAYECFICAVRLENLNALRDHQAQRSPKNWICTICGIKKPSRSAMLAHERLHTGERPYRCELCDKAFSSLGCLRSHQKCHVPRQYECTTCKEQFARLENLKRHIRFKHGEATYQCEVCTKMFKTREKLSIHIRIHTGEKPYKCRAEGCDRWYTNTADRRRHEMAEHTRERPHQCGYCEAAFIRKRQLMIHERRHTGDRPYSCLVCGKSFVEATALRRHTDKVCSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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