Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:54891642-54896165[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00038 0.018 14.8 0.3 2 23 276 297 275 297 0.97

2 15 0.00018 0.0085 15.9 3.5 1 23 328 351 328 351 0.97

3 15 0.028 1.3 9.0 0.3 3 23 358 378 356 378 0.93

4 15 3e-05 0.0014 18.3 2.8 1 23 382 404 382 404 0.97

5 15 0.24 11 6.0 0.1 2 23 415 437 414 437 0.93

6 15 0.0017 0.081 12.8 1.5 2 20 444 462 443 464 0.94

7 15 4.4e-07 2.1e-05 24.1 1.5 1 23 473 495 473 495 0.98

8 15 0.0052 0.25 11.3 3.3 1 23 501 524 501 524 0.96

9 15 0.001 0.049 13.5 0.7 2 23 838 859 837 859 0.97

10 15 0.0014 0.065 13.1 1.0 1 23 890 913 890 913 0.98

11 15 0.01 0.48 10.3 0.5 2 23 919 940 918 940 0.94

12 15 0.0002 0.0095 15.7 2.9 1 23 944 966 944 966 0.97

13 15 0.67 32 4.6 0.7 2 23 977 999 976 999 0.92

14 15 7.3e-06 0.00035 20.2 0.3 3 20 1007 1024 1005 1026 0.93

15 15 0.00021 0.0097 15.7 0.5 1 22 1035 1056 1035 1056 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00038	0.018	14.8	0.3	2	23	276	297	275	297	0.97
2	15	0.00018	0.0085	15.9	3.5	1	23	328	351	328	351	0.97
3	15	0.028	1.3	9.0	0.3	3	23	358	378	356	378	0.93
4	15	3e-05	0.0014	18.3	2.8	1	23	382	404	382	404	0.97
5	15	0.24	11	6.0	0.1	2	23	415	437	414	437	0.93
6	15	0.0017	0.081	12.8	1.5	2	20	444	462	443	464	0.94
7	15	4.4e-07	2.1e-05	24.1	1.5	1	23	473	495	473	495	0.98
8	15	0.0052	0.25	11.3	3.3	1	23	501	524	501	524	0.96
9	15	0.001	0.049	13.5	0.7	2	23	838	859	837	859	0.97
10	15	0.0014	0.065	13.1	1.0	1	23	890	913	890	913	0.98
11	15	0.01	0.48	10.3	0.5	2	23	919	940	918	940	0.94
12	15	0.0002	0.0095	15.7	2.9	1	23	944	966	944	966	0.97
13	15	0.67	32	4.6	0.7	2	23	977	999	976	999	0.92
14	15	7.3e-06	0.00035	20.2	0.3	3	20	1007	1024	1005	1026	0.93
15	15	0.00021	0.0097	15.7	0.5	1	22	1035	1056	1035	1056	0.94

Sequence Information

Coding Sequence: ATGGCACGTACCGGCTGCGAGGTATGCTTATCGCAGTCCAAGGAAACGTATCTGGACATTTTCGCCGAAGAGAACTCCGACAAACAGATTGCCCTGATCATTTCCAAGTATCTATGGTTCGAAGTCAAACCGGTGCCGGAAGAAAGTACACGCTGTATCTGTTCCAGCTGCTGGCTTTCCCTGGAGCAGTTTCATGATTTCTACACCGAAATTCAACGGGCACAAGCGATCGTTTTAGTTCATAGCACGGATGCTGCCACAGACGCTGGGAATAAATCGGAATGCATTCTGGAAGACAGTGCCACAGGCAAGATTCATCCCGAGTTTTACGAGGTGAAGGTAGAACCGACCGATAACATCCAGGAGGGAGTTAACGAAGAGGAGACGGAAGATCATTGTACGGAGAAGCCCTTagcatgtgtgtttgtcaaaTGTGAGGGACTCGTAGCACCAGACCCAACGGCACAATCCggtgaggaagaagaagaagacattttgctggagcagcagcagcagccgatggaggaggaggaggaggaggaggagcaaacCGTTGAATCATCAGAGGACTGCTCTACGGCCGGCGAAGGAACGTcgaaagggaagcgaacgagaaaacCCACCACTGACCAGGACTCGAAGGCGCGAAAAGTGGAAGACCAGCAAAGGGAGGACGAGGAGTTGCTGCGCTTCTACAAGCGGATAGTGTGCGAGACGTGTGATAACCAGCGGATGATGGCCGGCGAGCCACAGATAGACTACGGCACCTGGAGGGCGCTGCTAAGGCACACGAAGGAGTGCCATGGGCACGACAAGATCTACGTCAAGTGTCCCGTATGCGAGGTGAAGCTTCGGACCAAATTtaatctgctgcagcacatgGAAATGCACGAAAACCCGGAAAAGTACCGCTGCAAGCTGTGCTCCGAGGTGCACCAGAACATGAAGGAGCACATGCAGAACAAACACCAAGAGCGCCAGTTTTGCTGCGACGTGTGTGGCAAAAAGTTCCCATTCAAAAAGAGGCTCACGGTGCACATCAAGAAGATGCACGTAGAGAAGGACATTATCTGCGAACAGTGCCAGAAACCCTTTACTCGGTACACGATCGAGGACCATAGGCGCTCGGTGCATACGGCACGGTTCGTGTGCGAGCACTGCCCGAAAACGTTCAACAGCCGCTTCCGGTTACGGCAGCACATGGAGGAGCACGATGAAAGCCTGCGCAACTCCACGTCCGTGCCGTGTACGGTGTGCGGGCAGGTGATGCGCGACAAGTACATCCTTAGCCGGCACGTGAAGCTAATGCATACCGTACAGCCGTCGGTGAGTTGCACTACGTGCGGCAAAACGTTCAAGTGTAAGCGCAACCTATCGGTGCATATGGCCAACGTTTGCCTGGAACCGACGCGCCTGTTTCCGTGCACGGTCTGTGGGAAAGAGTTCCGGCGGAAGAACAAGCTGAAGGAGCACATGACGACACATACCGGCCGACCGCTGTACATGTGCTCGTTCTGCCCGGAAACGTTCCGGCAGGATACGCACCTGTACTACCACCGGAAGAACGCGCACTACGAGCAGTGGCTGGAGATGCAGAAGCAGCGGAAGGAAGGGGTACGCTTTCGGTTGAACGAACTGTCATCGTTATGGATCTACCACAACGGAGCCCGCGGAGGAATTTGTTTTGGTTCCCCGTGCGAAAGCGAACAAAGCCAACTGGAAGCCGGGACCGCAATGGAATGCCAGGTGTGCTATCGGACGAACGAGACGGAATACTTGGATATTCACGCCAAGGAGCACATCGAGAAGCGTATCGCCACGTTAATAACCCAGCATCTGTGCTTTGAGCTACTACCGAGCGTGGACACACAGTTCATCTGCGCCAAGTGCTGGACCGCTTTGGATGAGTTTCACAGATTCTACAGTGACATTGAAGCGGTGCACCGGGCAAGGATAGAGGATGACGAGTGTAACAAGCACAAGGTGGAGTCTCCCGGTTCCGCGTGCCAAGATGAGCCAACGTACACCACGGAGTTTCTTGAAATTAAGGACGAACcgatggaagaggaagaggagcaagGGGACGGTGATGAACCGTTCGATCTGGATGCGGTAGATAAGGAGGAACCACCGGACATGGTGGATTCCGATGCTCCCgaagatgacgaggaggaggaggaggaagaaaaagattGTAATGATGAAGAAGGAGATGCAACGTCCTCCAACGACCGAAAACCCTCTAAAACCGAACTGAAAACggcaagaaggaaaaaggagacCACGAGGAGCAGGGGAAAGCCAGATCACACGGAACCGAAAAGGAAGCCGGCCTCGGAGAGTGTACCGACGATGGACGACGGTGAACTGCTGGAGTTCTACAAGCGGATCGTGTGCGAGGTGTGCGACAATCAGCGCATGATGCGGGGCGAACCGTTGATTGACTTTGGTTCCTGGACGGCGCTGCTGCGCCACTCGAAGGAGGTACACGGCCATTACAAGATCTTCGTCCAGTGTCCCATCTGTGGGTGTAAGATGCGCACGAAGGTCACGCTGTGGCAGCATATGGATATGCACAAGCACCCGGATAAGTATCGGTGCAAGGTGTGCTCCGAGGTGCATCAGAACATGAAGGAGCACATGCAGAATAAGCACGAGGAGCGGCAGTACAGCTGCGATCTGTGCGGCAGTAAGTTCCCCTTCAAGAAGCGCCTCGTGGTGCACATGAAGAAGATGCATGCCGAAAAGGATGTCCCGTGTGATCAGTGCCAGAAATCGTTCACCAAGTACACGATCGAAGACCACAAGCGCTCGGTGCACATGGCCCGGTTCGTGTGCGAGCACTGTCCGAAGACGTTCAAAATACGCTTCCGGCTGTTGAAGCACATGCAGGAGCACGACAAGAGCCTGCGGGTGGCCACCTCCGTCCCGTGCCACATCTGCGGCCAGGTGATGGGCGACAAGTACATCCTGAGCCAGCACATCAAGCACATGCACGCCGAGCAGCAATCGGTCAACTGTGATACCTGTGGCAAAACGTTCAAGAACAAGCGCAACCTGACCGTACACCTGGCGAACGTGTGCATGAAGCTGGCGCGGATGCACCCGTGCAGTATCTGCGACAAGCAGTTCCGCAACCTGAACCGACTGAAAGACCACATGGCTACCTGTACGCCCATCTGA
Protein Sequence: MARTGCEVCLSQSKETYLDIFAEENSDKQIALIISKYLWFEVKPVPEESTRCICSSCWLSLEQFHDFYTEIQRAQAIVLVHSTDAATDAGNKSECILEDSATGKIHPEFYEVKVEPTDNIQEGVNEEETEDHCTEKPLACVFVKCEGLVAPDPTAQSGEEEEEDILLEQQQQPMEEEEEEEEQTVESSEDCSTAGEGTSKGKRTRKPTTDQDSKARKVEDQQREDEELLRFYKRIVCETCDNQRMMAGEPQIDYGTWRALLRHTKECHGHDKIYVKCPVCEVKLRTKFNLLQHMEMHENPEKYRCKLCSEVHQNMKEHMQNKHQERQFCCDVCGKKFPFKKRLTVHIKKMHVEKDIICEQCQKPFTRYTIEDHRRSVHTARFVCEHCPKTFNSRFRLRQHMEEHDESLRNSTSVPCTVCGQVMRDKYILSRHVKLMHTVQPSVSCTTCGKTFKCKRNLSVHMANVCLEPTRLFPCTVCGKEFRRKNKLKEHMTTHTGRPLYMCSFCPETFRQDTHLYYHRKNAHYEQWLEMQKQRKEGVRFRLNELSSLWIYHNGARGGICFGSPCESEQSQLEAGTAMECQVCYRTNETEYLDIHAKEHIEKRIATLITQHLCFELLPSVDTQFICAKCWTALDEFHRFYSDIEAVHRARIEDDECNKHKVESPGSACQDEPTYTTEFLEIKDEPMEEEEEQGDGDEPFDLDAVDKEEPPDMVDSDAPEDDEEEEEEEKDCNDEEGDATSSNDRKPSKTELKTARRKKETTRSRGKPDHTEPKRKPASESVPTMDDGELLEFYKRIVCEVCDNQRMMRGEPLIDFGSWTALLRHSKEVHGHYKIFVQCPICGCKMRTKVTLWQHMDMHKHPDKYRCKVCSEVHQNMKEHMQNKHEERQYSCDLCGSKFPFKKRLVVHMKKMHAEKDVPCDQCQKSFTKYTIEDHKRSVHMARFVCEHCPKTFKIRFRLLKHMQEHDKSLRVATSVPCHICGQVMGDKYILSQHIKHMHAEQQSVNCDTCGKTFKNKRNLTVHLANVCMKLARMHPCSICDKQFRNLNRLKDHMATCTPI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -