Basic Information

Insect: Anopheles albimanus
Gene Symbol: uxs1
Assembly: GCA_013758885.1
Location: NC:27100917-27108172[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00015 0.0069 16.1 3.5 2 23 899 920 898 920 0.97

2 10 0.0023 0.11 12.4 1.3 1 23 926 950 926 950 0.97

3 10 3.1e-05 0.0014 18.3 0.8 1 23 956 978 956 978 0.98

4 10 4.1e-05 0.0019 17.9 1.6 1 23 984 1006 984 1006 0.99

5 10 1.1e-06 5.2e-05 22.8 2.5 1 23 1012 1034 1012 1035 0.95

6 10 5.7e-08 2.7e-06 26.9 0.7 1 23 1041 1063 1041 1063 0.98

7 10 0.79 38 4.4 1.0 1 23 1069 1091 1069 1091 0.94

8 10 7.9e-06 0.00038 20.1 0.5 1 23 1097 1119 1097 1119 0.99

9 10 2.9e-06 0.00014 21.5 1.4 1 23 1125 1147 1125 1147 0.99

10 10 0.0011 0.051 13.4 0.1 2 23 1172 1194 1171 1194 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00015	0.0069	16.1	3.5	2	23	899	920	898	920	0.97
2	10	0.0023	0.11	12.4	1.3	1	23	926	950	926	950	0.97
3	10	3.1e-05	0.0014	18.3	0.8	1	23	956	978	956	978	0.98
4	10	4.1e-05	0.0019	17.9	1.6	1	23	984	1006	984	1006	0.99
5	10	1.1e-06	5.2e-05	22.8	2.5	1	23	1012	1034	1012	1035	0.95
6	10	5.7e-08	2.7e-06	26.9	0.7	1	23	1041	1063	1041	1063	0.98
7	10	0.79	38	4.4	1.0	1	23	1069	1091	1069	1091	0.94
8	10	7.9e-06	0.00038	20.1	0.5	1	23	1097	1119	1097	1119	0.99
9	10	2.9e-06	0.00014	21.5	1.4	1	23	1125	1147	1125	1147	0.99
10	10	0.0011	0.051	13.4	0.1	2	23	1172	1194	1171	1194	0.95

Sequence Information

Coding Sequence: ATGGTGTTTTCAAAGAGAAAGATGAAGCAGTTCTTAGTGTTCGGAGTGACGATCTTTTTGGTGGTTTGTTTTTACAAATCGTGGGGCAACCCGATGAACGGGTTGGGACCGGCACAATTCGGTGAGGTGGTTTtttccgacgatgacgaggctGATAAGAGCGCGCTGCCCCAAGGTAGAATCGTCGATGGGAACCGGGAAGCTGTGCTGCAGGAACGATCGGTGCTTGGAAATGCCGATCGAAGCATCAATGATAAGCGTCCGCGTGGAGTGTTTGAATCGCGGGAGGAACGGGGTGCACCGCCAGGCCCCAAACATCTCCACCCGAAGGATGTGCGGCTTGCGGAAGATTTCGATGGTGAGCACGAGTCCCGGTTGAACGAGCTGCACGAGGCAAAGCGCCAAATTTTGGAACTGGAGCGTAAGATACAGGAGTTGGAAGGTCGGATACCACGCAAGTATCCGGATGTAACCTTCCTCAACTATAAAAACCGTAAACGTATTTTGATCACCGGGGGAGCCGGTTTTGTCGGTTCACATCTGGTCGACTACCTCATGATGCAGGGTCACGAGGTGATAGTGGCGGACAACTTTTTTACCGGCCGCAAGCGCAACGTGGAGCACTGGCTCGGTCATGAGAACTTCGAGCTAATCCACCACGACATCGTCAATCCGCTGTTCATCGAGGTGGACGAAATTTATCATCTGGCGAGCCCGGCCAGCCCACCGCACTACATGTACAATCCGGTGAAAACGATCAAAACCAACACGCTCGGCACGATCAATGTGCTCGGGCTGGCGAAACGGGTCGGCGCCAAGGTGCTGATAGCCAGCACGTCCGAGGTGTACGGTGATCCGGATGTGCACCCGCAGCCGGAAACCTACTGGGGCCACGTGAATCCGATCGGTCCGCGAGCGTGCTATGACGAGGGTAAGCGCGTCTCTGAAACGCTCAGCTACGCCTATGCCAAACAGGAGAAAGTGAATGTACGCGTGGCGCGTATATTCAACACCTACGGGCCCCGGATGCACATGAACGATGGCCGCGTTGTGTCCAACTTTATCATTCAAGCACtgcaaaatcaatcaattacgATCTATGGTAGCGGAAAGCAAACGCGATCGTTCCAGTACGTATCAGATTTGGTTGATGGGCTAGTGTCACTGATGGCCTCCAACTACACGCAACCCGTTAATCTGGGCAATCCCGTGGAACGTACGATACAGGACTTTGCTGAAATCATTCGCGATCTGGTGGGCTGCAAGAGTCAGATCATCGAGCTACCGGCGGTAGAGGATGATCCTCAGCGACGGAAGCCGGATATTTCGCGCGCCAAGAAAGAGATCCACTGGGAACCGAGGGTTCCATTGCAGGAGGGCCTCATGAAAACGATAGATTACTTTCGCAAGGAACTGGCACGCTCGAACCACTCGCAACGGAACATTTTCGTACCTGAAACGACAGAGTACCGCAATCTGGTGTCAGATAAAAGAACTACAGAAAGAGCCTTTTCCTACCAAACGAAGCCGTCCTGCGCTGTACCACGCTTTTATAGATGGTGGAGCACGATGAGCGATCTGTGTCGGTTGTGTTTGAAGAAAAGCGAGTTGTTCGGGCTGCACAACATCACGTCCGCGGATGGCTTACTGCGGAATCTGCCGAAAATGCTGCGGGAGTGCGTGTCGATCGAGGTGAACGACACCGAGCCACCCCTGTTTTCGAAGCACATCTGCCAGGATTGCCTCTTTAAGCTTGAGCTGTTCGCAGCATTCCGTGAAACTGCGTTGAAAAACCAAGAATACTTCTATGGTCTCTTGCTATACTTTCCCACTACAGCAACCTGCTCATCTACGGAACCGGTAGCCGGTAATGATTGTGTTCAGTACTGTATGGAGAGCCAACTACAAGCACAGCAGCCAACGACGAGCCAAGCAGCACACTCGAATCAGCAAGCGGTAGACGACGCGCAACACCATCAAATACTGGCCGATATTAACTTCAATGGCAACGAGTTCATGATGGACGAATCGGAAAAGTCCCAACTGAATCGGGATTATGATGACATCATGCGAAGCCTCCAAAAAGAAGATCTAGATTTCACAACTAATGGGGACGATTTCGAACAACACGGCTTGGAGATATCTATCCATAAAAATGTGGATGATAAGTACGCGGAACATACAGTGAAGCATGATTTGCAGATCCAACAGCAAGATGAACAACATCTAGTGCATCATCGTCAGGAAGAGCAATTACATCTATCGCAATCGGCAACTCAGCTTAATGTTTGCTTCGATCCTTATACCGGAATCGGAACATCAATCAATGCCCAAGAGAGCATGGACCGGGCCGTCACTCCAGCGGAGGATAACGACATCAGCTACGACGATTTTGTAGGGCTGAAAACACCATCGGATGGTCATCAAGAATCGTCAATAAGCGACATACAGGTGCAACGATTAAGCGTGGACCTTGTACAGGCAGAGGATCACATCATCAATCAGTCAATGGTTTCTGTACATGATGCATCGCAATCTATTGTCGTTTCCTCGACCAACGAACTGGACCCGCAATCTGTTCAATCGATTCGCGTGAGCGATGACTCCGACGATGGACTTCCGCAACCAAGTGTCCTAGAAACTGGCCCCGGCAACATAAAACGCACCTCGGATGGGATTGTATTGGACGATAAGACTTGCGATGTGTGTTTCAAAACGTTCCGCAGTCGGCAGAAGCTGAAGGTGCACCGCAACACACACTTGCGATTGGCACCGTTCAAGTGTTCCTTCGATGGATGTTCAAAAGCCTTCAAATCCCGTATCGGTCTCGAGGAGCATCATGCACGGCATACGAATACTTTTGAGTTTTCCTGCGATATCTGCTCAAAGGGGTTTCAAAACCGTAGCTATCTGTCCGCGCACCGTCGAGCGCATAATCTAGAGCGACACTTCCAATGTAACCTGTGTGAACAAACGTacaaatcgaagcaagcgTTGCAAGATCACCAGAATCGTCATCTGGGACTGAAACCGTTTAGCTGCGATCAGTGCGATAAACAGTTCACTAATAAATCACTCCTGCAGGCGCACAttcaacagcaccaccgagcagaggTGCGTTATCCGTGTGAGGAGTgcggcaaaagtttcactTCACGCAGCTATCTTACCGTCCATCGCAAGATCCATCGCAATGAGCGTGCGTTCATCTGCCAGGTTTGCGACAGAGCGCATCTAACGCGCAGAGACCTGGAAATACACATGACAAAGCATACGGGTTTGAAGCCGTATGTTTGTGAAATCTGTGGTAAAGATTTCGCTCGCCGGAATGCTATGTACTCAcaccggcgcacacacactaagGAGCGCCCCTACACCTGTGATATATGTGGACAATCGTTTTCCCAGCATACTCCGCTTCAGGTACACCGACGGATGCACCTAGGGACGGGCAGCACATCACTTAAGAgtcaggaacagcagcaacatccgcaGCAAGAATCGTTTAAGTGGGTCTGCTCGATCTGTACGGTCAGCTTTGCGACAGAGCATTCACTTGATGTCCACATTAGAGCGGAACACAcgcaataa
Protein Sequence: MVFSKRKMKQFLVFGVTIFLVVCFYKSWGNPMNGLGPAQFGEVVFSDDDEADKSALPQGRIVDGNREAVLQERSVLGNADRSINDKRPRGVFESREERGAPPGPKHLHPKDVRLAEDFDGEHESRLNELHEAKRQILELERKIQELEGRIPRKYPDVTFLNYKNRKRILITGGAGFVGSHLVDYLMMQGHEVIVADNFFTGRKRNVEHWLGHENFELIHHDIVNPLFIEVDEIYHLASPASPPHYMYNPVKTIKTNTLGTINVLGLAKRVGAKVLIASTSEVYGDPDVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVNVRVARIFNTYGPRMHMNDGRVVSNFIIQALQNQSITIYGSGKQTRSFQYVSDLVDGLVSLMASNYTQPVNLGNPVERTIQDFAEIIRDLVGCKSQIIELPAVEDDPQRRKPDISRAKKEIHWEPRVPLQEGLMKTIDYFRKELARSNHSQRNIFVPETTEYRNLVSDKRTTERAFSYQTKPSCAVPRFYRWWSTMSDLCRLCLKKSELFGLHNITSADGLLRNLPKMLRECVSIEVNDTEPPLFSKHICQDCLFKLELFAAFRETALKNQEYFYGLLLYFPTTATCSSTEPVAGNDCVQYCMESQLQAQQPTTSQAAHSNQQAVDDAQHHQILADINFNGNEFMMDESEKSQLNRDYDDIMRSLQKEDLDFTTNGDDFEQHGLEISIHKNVDDKYAEHTVKHDLQIQQQDEQHLVHHRQEEQLHLSQSATQLNVCFDPYTGIGTSINAQESMDRAVTPAEDNDISYDDFVGLKTPSDGHQESSISDIQVQRLSVDLVQAEDHIINQSMVSVHDASQSIVVSSTNELDPQSVQSIRVSDDSDDGLPQPSVLETGPGNIKRTSDGIVLDDKTCDVCFKTFRSRQKLKVHRNTHLRLAPFKCSFDGCSKAFKSRIGLEEHHARHTNTFEFSCDICSKGFQNRSYLSAHRRAHNLERHFQCNLCEQTYKSKQALQDHQNRHLGLKPFSCDQCDKQFTNKSLLQAHIQQHHRAEVRYPCEECGKSFTSRSYLTVHRKIHRNERAFICQVCDRAHLTRRDLEIHMTKHTGLKPYVCEICGKDFARRNAMYSHRRTHTKERPYTCDICGQSFSQHTPLQVHRRMHLGTGSTSLKSQEQQQHPQQESFKWVCSICTVSFATEHSLDVHIRAEHTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -