Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:78218885-78227075[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 6.8 3.2e+02 1.5 1.0 2 23 235 257 235 257 0.92

2 29 0.0046 0.22 11.4 0.5 1 19 267 285 267 288 0.95

3 29 0.0012 0.058 13.2 2.3 1 23 295 318 295 318 0.93

4 29 0.16 7.6 6.6 0.3 2 19 410 427 409 430 0.93

5 29 0.014 0.67 9.9 1.3 1 23 438 460 438 460 0.97

6 29 0.84 40 4.3 2.5 2 23 525 549 524 549 0.87

7 29 0.19 9.2 6.3 0.1 2 21 572 591 571 592 0.92

8 29 0.0033 0.16 11.9 1.3 2 23 600 622 599 622 0.95

9 29 0.00042 0.02 14.7 3.8 1 23 629 651 629 651 0.98

10 29 0.015 0.69 9.8 0.1 3 23 659 682 657 682 0.92

11 29 3.1e-05 0.0015 18.2 0.7 1 23 688 710 688 710 0.98

12 29 0.98 47 4.1 4.0 1 23 716 741 716 741 0.93

13 29 0.11 5.1 7.1 2.3 1 23 747 770 747 770 0.96

14 29 8.3 3.9e+02 1.2 2.4 2 23 1054 1076 1053 1076 0.92

15 29 0.005 0.24 11.3 0.1 2 21 1086 1105 1085 1106 0.95

16 29 0.096 4.5 7.3 1.8 2 21 1114 1133 1113 1134 0.92

17 29 4.1 2e+02 2.1 2.7 2 23 1246 1267 1246 1268 0.91

18 29 2.4 1.1e+02 2.9 0.1 2 23 1279 1300 1279 1300 0.94

19 29 0.0003 0.014 15.2 0.2 1 21 1306 1326 1306 1331 0.94

20 29 0.9 43 4.2 0.4 2 23 1409 1431 1409 1431 0.93

21 29 0.36 17 5.4 0.6 1 20 1446 1465 1446 1467 0.94

22 29 0.0023 0.11 12.4 0.7 3 21 1478 1496 1476 1501 0.94

23 29 0.57 27 4.8 3.4 1 20 1614 1633 1614 1635 0.94

24 29 6.6e-05 0.0031 17.2 0.6 1 23 1642 1665 1642 1665 0.97

25 29 2.6e-05 0.0012 18.5 0.3 1 23 1672 1694 1672 1694 0.97

26 29 0.0002 0.0094 15.7 1.1 1 23 1700 1723 1700 1723 0.96

27 29 0.00017 0.0079 16.0 0.6 1 23 1729 1751 1729 1751 0.98

28 29 0.00067 0.032 14.1 6.0 1 23 1757 1780 1757 1780 0.93

29 29 0.00014 0.0068 16.2 1.7 1 23 1786 1808 1786 1808 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	6.8	3.2e+02	1.5	1.0	2	23	235	257	235	257	0.92
2	29	0.0046	0.22	11.4	0.5	1	19	267	285	267	288	0.95
3	29	0.0012	0.058	13.2	2.3	1	23	295	318	295	318	0.93
4	29	0.16	7.6	6.6	0.3	2	19	410	427	409	430	0.93
5	29	0.014	0.67	9.9	1.3	1	23	438	460	438	460	0.97
6	29	0.84	40	4.3	2.5	2	23	525	549	524	549	0.87
7	29	0.19	9.2	6.3	0.1	2	21	572	591	571	592	0.92
8	29	0.0033	0.16	11.9	1.3	2	23	600	622	599	622	0.95
9	29	0.00042	0.02	14.7	3.8	1	23	629	651	629	651	0.98
10	29	0.015	0.69	9.8	0.1	3	23	659	682	657	682	0.92
11	29	3.1e-05	0.0015	18.2	0.7	1	23	688	710	688	710	0.98
12	29	0.98	47	4.1	4.0	1	23	716	741	716	741	0.93
13	29	0.11	5.1	7.1	2.3	1	23	747	770	747	770	0.96
14	29	8.3	3.9e+02	1.2	2.4	2	23	1054	1076	1053	1076	0.92
15	29	0.005	0.24	11.3	0.1	2	21	1086	1105	1085	1106	0.95
16	29	0.096	4.5	7.3	1.8	2	21	1114	1133	1113	1134	0.92
17	29	4.1	2e+02	2.1	2.7	2	23	1246	1267	1246	1268	0.91
18	29	2.4	1.1e+02	2.9	0.1	2	23	1279	1300	1279	1300	0.94
19	29	0.0003	0.014	15.2	0.2	1	21	1306	1326	1306	1331	0.94
20	29	0.9	43	4.2	0.4	2	23	1409	1431	1409	1431	0.93
21	29	0.36	17	5.4	0.6	1	20	1446	1465	1446	1467	0.94
22	29	0.0023	0.11	12.4	0.7	3	21	1478	1496	1476	1501	0.94
23	29	0.57	27	4.8	3.4	1	20	1614	1633	1614	1635	0.94
24	29	6.6e-05	0.0031	17.2	0.6	1	23	1642	1665	1642	1665	0.97
25	29	2.6e-05	0.0012	18.5	0.3	1	23	1672	1694	1672	1694	0.97
26	29	0.0002	0.0094	15.7	1.1	1	23	1700	1723	1700	1723	0.96
27	29	0.00017	0.0079	16.0	0.6	1	23	1729	1751	1729	1751	0.98
28	29	0.00067	0.032	14.1	6.0	1	23	1757	1780	1757	1780	0.93
29	29	0.00014	0.0068	16.2	1.7	1	23	1786	1808	1786	1808	0.98

Sequence Information

Coding Sequence: ATGGCTGCGATAAAGAAGGTGGCCGGACTTAGGAGTCCAAAAAAAGTGTGTCGCTTCTGCACCACATCGGTGCCACCAAGCCGTGCTGTTGATATCTTCTCGACGACGAACGATAAAAGCGCAACTCGAACGGTCGCGGACGATATAGCCGAGTTTGCGGATGTTACGCTTAGCAACGAGGATGATGACCGTTCCAAGTTCATATGCACCGGCTGTGTGAATGTGCTTTCAGCAGGGCTTCAGCTGCGCCGCGAAATCCGTATCAGCGAGAAGGCCATCCAAACCGTGCTACAATCCGTTGAGGTCCAGGAAGACTCTCCCAAGTGGGATCACAACTATGGCACGCTAGAGTACTTGGAGGAGTACGAGGACGAAATAGAAGGCATAAGGGCGATTGAAGGATCCGATGGCATGCTAGATGAAAGCGTGCAGAATGGAGATGTaatcaaagcaaaaagcaCCAACTTCAATGAAGACGGATCTCTAGAGGAAAGTAGCCCAAACTGCATCGATTATGATGAGATCGATGACGAGTCGGTACAGGATGACATTAGCACGGAGCAACTGCTGGAGCAGGAACACGATATGATTCCGTACAGTTTTTCGGAGGTTGGCAAATTTCCGTTTGTTAAGCCGCCCGCCAACCTGGTCAGTAATAGTATAACGTTCAAAGACTTTGAGTATCTTGAGATCGATGGCGAACGGTGTTGTGGCTGCTCGTACATCGCACATACACGTGACGAACTGATGGTGCACGCGGCGAAGATACACTCGAAGAGCTACTACCCGGACAGTAGCTACACCTGCCCTACATGCTACCAAAAGTTCTCAACAGAAGAAGAACTATCGCAACATTCGCTCTACTATTTGACCAACGATGTCTTCCTGTGCAGCCTGTGCCAGTATGCGTTCAACTTCAAGAGTCATCTTATGGTCCACCTGAAGCAGGAACACCAAGAGCAGAAGCCACGACAAACGGGGATCAAAAGAAAGAGCCAGACATCGTCCAAGCAAGAAGCGAAACGAGCCTTGACGCAGAGAAAAATTTTCGAACTTCCGGAGGAACAATTTATCAAGGAGGTGATCGATCACCAGCATTATCGGGAATACCATCTCAAAGGGGAGCGATGCTGCGCGTGCAATATTCTACAGGAATCATTGTACGATCACGCTAACGAAAAGCATCGGCAGCTTGAGAACATGCTCGAAAGTGTGGAGGGCGTAACGAAGTGCGCCGTATGCCAACGTATGTTTACCTCCGATTGTGAGCTGATAGTGCATGAGGAGCAGCGCCGAATATTGAATCAAGTGTATGAGTGTGGAACGTGTGGCCGAACGTTCGGCAAACGGCTTGAGATCTTAAAGCATTTGCAACATCATAGCGCACATGGGCAGATCAAAAACCAGATGAAtaatgatgaggatgatgatgatgatgcaaagcGATCCTCCACAGCAAATGCAGCGGCAGATGTCTTGGAAGAGAGCGCCGATGAAGATACAGCATTACGGCCGCTTCCAACGGTAACGAACGAtgcggaaaatgggaatgCTGCTGGATTGCAGGTTTTCCCGTGCTGCTTTAATCGGTGCCACCAAACGTATCCTTCCGAGAAGGAACTGCTGGCGCACGTTAACGAAAAGCATGCGGGACGCCTGAAGGAGAATGACATGACCCGTGAGAAGAACCGACCGAACGCAGAGCCGGCCCTTGTGTGCCCCATTTGTAAACGATTGTTCGAATCGGATGAAAAGCTAGCATCCCATCGCATGTACAAGTTGCGCGTCGAGAGACTTTCCTGCCGTCACTGTGATCGTCAGTTCATGAGACCGCAGGCTCTATCGGAGCACCAGCTGCGCGAACATTTTAATCTTCCCGCCCAGTTTATCTGTACGACCTGTGGCAAGCAGTATCAGAATCGTCATTCACTGGCCCAACACAAGCGCACCCATGAGCCATCCAGTAACACACCTTGTGAGGCCGAGGGCTGCGAAATGGTGTTCCGTGATGAGCGTCTGATGCGACGCCACTATCGTAACGTGCACACTGAGTACACACCGTACGCATGTGAAGACTGCGACCGGCAGTTCCGCACGAAGGAGGCCTTCGTTCTGCACCGACGAAGTCACACCGGTGAGCGACCTTTCCACTGTCGGTTCGACGGATGCAATCGCACCTTTGCCCACGGCACCGACCGTCGCCGGCATGAGCGATCGGCACATACCGGAGAGCGACCACACAAGTGTACCCAGTGCGAATCATCGTTCCTACGAGCCAGAGAGCTGCGCATTCATCAGGAGCGTACACACAAGCTGATCAAATCGACCAATCCTGAGCAATCCAAACGAGCCTGTGTTGTTTACGCTTCGTCCGGGACaaattttgtaattttattCTACAAAAACACCATGCAGCGAACCTCGAAACGACTTCAAAAGGCCATCACAGATcagcgaaagaaaacgaaatccgATGGCAACGTTTGTTGCTGCCTGTGCTTGGAGTTTTATCGTGCCGCGGTGCTCAACAAACTGAACAATGTTGTGCCCGATGAACCGTCTCTAACCATTGGGAGCGTCGTCGAAAAGGTCGCCTCGGTTAAGATCAAAAGCAGTGATGAGAGTATCTGCGATTCGTGCTGGGAACAGATAAAGAGCGCCTACGAGATACAACGCAGAATCCGCGTCTCCAATCGGCTGGTCGTGAAGCAAGACGAGCAGGAAATCGAATCCATCGATGATTCCGACACATCATACACCGAACAGGTGGAAGAAGAAACGATTCGGATGAAAGAAGAGACGGAAATTGACGATGAATATCTGGATCATACTGCCGTATCGAACGATCATAACTACGATGGATGTAAGCAGGATGAAGAGAACATCCTGATAATAGACGATGCCTTCGTAGATGAAGAACAGGAAGCGAGTGTGGAGGAAGAGGGGGAATATGAGGAGGAGGGGCCGGAAGCGACGGAAGTGACGGAAGTGACGTTACATCTGGAAGCGGACATCATTGtagaggatgaggaagagaaaaaaataaaacccctCGACGCGACCGGCAACGTGATGCGACAGTTTAAAATGCCTCCCAAGGCACTCGTAGTGAGTGATCAGATGTTCGATAACTACCGGAAGCTGCTAGTGTCTGGGAAACGGTGTTGTGGATGCAGCTTCGTTGCGGAGAATCGCCGTGAACTGTTGCGGCATTCGGAGCGGTTTCACGCGTGCACCATCACCGATATGGGAGACTACTGTCCCATCTGTTTCTTCAAGTTTCCCAGCGACACTCAGCTCGAGCGCCACATACGAGAGTTTGAATCTAGCATGATGCTAGTCTGCCTACGTTGCAATTGCTTCTACAACAATCGGTCCCAACTGTACAAGCATCTGCTAATGTGTGGCGAAGAAGGCACACAAGCAGCACCGGTCACCGATTCGACGGACGAAAGCGAGGACGAACCGGAGAACGAGGGCGAGGAGAATGAAGCGGACGAAGGGAATTATGGTGGAGACCCAAATGATACGATCGAGTACTACCTGCTGGAAGAAACGCCAACCCGTGGAAGCGACCTGCGGAAGATGTACCGATATCGGGCCAAAATTGCTGATCTGCTCACCGATGTTAATCTATCGTACCCCGGCGGCCACGAACAGCTCAACATCCAGGAGAGTCAAATACATCAGCGAGAAGTGTTTGATACGTTTGAGTACGTGTATCTGCGCGGAGAgcgatgctgcggctgttCGTATACGGCCGTGTCGGCCGATCACCTAATGGAACACGGTATCTTCCACCATAATGCGGCCACGGGTGCTATCGACAACCGTACCTGTGGTTTGTGTAGCGCCGGTTTTAACAGTGTGCTGGAGCTCTTGAAACATTACATTTTCCATGTCTGTAAACAGCTGTTCTTCTGTACAATCTGCCAGGTGTCCTTCGTTTCCCTCGATAGCCTTCAGAACCATCAGCGCGGTAGCGAAGCACACCGGCAAATCGACAAGTACAAGCAGGCCGGTTTAGCGGATGGCGACACGGATGAATCGAGCCTGTTCGTCGAGCTGGACCGACCGGGGGTGATGGATCGATTGCAGAAGGTGCTGGCTCAGAGAATGATTTACCGGACCACCCCAATGCGAGGCTTACTCGTCCCGGACACGAAGTTTATCGCGCAGGAAGTAGAATACAACACTTACCGTAAGCTGAAAATGTCCGGTGAGCGTTGCTGCGCCTGCGGCCGGTTTTTTGAAACGATCGAGGAGATGCTTGAACATGCACGGTTGGCACACTTTCGGCCGATCGTGAATGTGGCCTCCTTCTGGGACGGTGGTCACCAGTGTAACTACTGTCTGTCTCAGTTCGAAAGCAAACGTGGACTCCAGATGCACTGGGCGTACCGAAGGAAGGGTAACATCACTCTCTATGGCTGCAAGTTGTGCGGCCTAGTGTTTTCGCGAATGTTTTGTCTCGCCCGGCATATGCAGCTGGCCCCGAATCATTTGTCGAAATTGATGCACGAGGCAGCGCGAGACACGAATGACGAGGAGCAGCTCAGAACGGTGGATCAGTCGACGGACGACGATGCGGACGATGACGCGGCAGCTGGTGGATCGAAAAAGCGGAAGGTGAAGCTAAAGCAAGACCCGCGCGTCGCAGAAGCACTCGAGCTGCATCCCTCGATCAAGGTAGAAAAAGTGGGACACCAGATCGGGTATCACTGCTGCTTTGCCAAGTGTACGCAAACGTTTcaggaagagcaggagctGCTTCAGCACACCGTGGCCGAGCACGAGGGCAAACGGAAAGAGTACGAAAGCGAGCGGACGTCCGCGAAGCACGTGTGTCCCACGTGCTGCAAATCCTACGACACGCAGAGGAAGCTAAACTGGCATCGTTTTCAGCGCTTCGTGCCCCGTCAGTATAACTGCAAACACTGTGATCTACAGTTTACCAAGTGGCCGCTGCTACAGGTACACATTGCTACCGATCATCTCGGGAAGCCACCTAGCTTCCCTTGTGCAAAGTGTGGCAAAGAGTTTATCACCCGATCGCGGCTGAAGGCTCACGAGAAGGTGCACGAAGAGGTCAAACAGTTCGTGTGCGATGAGTGTGGCGATCGGTTCCGGCACAAGGGGCTGCTGGTTCGGCACAggcgcgccacacacacgaccGAGCTGCGCTTCGAGTGCAAACTCTGCTCGAAGAAGTTTGCCGTGGTGGAGAAGCTAAAAGTGCACCAACGGGTACACACCGGATATCGCCCCTACCAGTGCCAGCATTGCGATCGCTCCTTCAGCCACCATAGTGACCGCAAGCGGCACGAAATGGCGGCCCATACCGGAGTACGGCCCCACCGGTGCACGATCTGTTCCGCTTCTTACATCCGGAACCGAGACCTTGTGTTGCACATGCGAAAACACTCGTCGATCGGGGAGACAAGGGAGGAAACATCCGAAGAGCTGATGGAACAATAA
Protein Sequence: MAAIKKVAGLRSPKKVCRFCTTSVPPSRAVDIFSTTNDKSATRTVADDIAEFADVTLSNEDDDRSKFICTGCVNVLSAGLQLRREIRISEKAIQTVLQSVEVQEDSPKWDHNYGTLEYLEEYEDEIEGIRAIEGSDGMLDESVQNGDVIKAKSTNFNEDGSLEESSPNCIDYDEIDDESVQDDISTEQLLEQEHDMIPYSFSEVGKFPFVKPPANLVSNSITFKDFEYLEIDGERCCGCSYIAHTRDELMVHAAKIHSKSYYPDSSYTCPTCYQKFSTEEELSQHSLYYLTNDVFLCSLCQYAFNFKSHLMVHLKQEHQEQKPRQTGIKRKSQTSSKQEAKRALTQRKIFELPEEQFIKEVIDHQHYREYHLKGERCCACNILQESLYDHANEKHRQLENMLESVEGVTKCAVCQRMFTSDCELIVHEEQRRILNQVYECGTCGRTFGKRLEILKHLQHHSAHGQIKNQMNNDEDDDDDAKRSSTANAAADVLEESADEDTALRPLPTVTNDAENGNAAGLQVFPCCFNRCHQTYPSEKELLAHVNEKHAGRLKENDMTREKNRPNAEPALVCPICKRLFESDEKLASHRMYKLRVERLSCRHCDRQFMRPQALSEHQLREHFNLPAQFICTTCGKQYQNRHSLAQHKRTHEPSSNTPCEAEGCEMVFRDERLMRRHYRNVHTEYTPYACEDCDRQFRTKEAFVLHRRSHTGERPFHCRFDGCNRTFAHGTDRRRHERSAHTGERPHKCTQCESSFLRARELRIHQERTHKLIKSTNPEQSKRACVVYASSGTNFVILFYKNTMQRTSKRLQKAITDQRKKTKSDGNVCCCLCLEFYRAAVLNKLNNVVPDEPSLTIGSVVEKVASVKIKSSDESICDSCWEQIKSAYEIQRRIRVSNRLVVKQDEQEIESIDDSDTSYTEQVEEETIRMKEETEIDDEYLDHTAVSNDHNYDGCKQDEENILIIDDAFVDEEQEASVEEEGEYEEEGPEATEVTEVTLHLEADIIVEDEEEKKIKPLDATGNVMRQFKMPPKALVVSDQMFDNYRKLLVSGKRCCGCSFVAENRRELLRHSERFHACTITDMGDYCPICFFKFPSDTQLERHIREFESSMMLVCLRCNCFYNNRSQLYKHLLMCGEEGTQAAPVTDSTDESEDEPENEGEENEADEGNYGGDPNDTIEYYLLEETPTRGSDLRKMYRYRAKIADLLTDVNLSYPGGHEQLNIQESQIHQREVFDTFEYVYLRGERCCGCSYTAVSADHLMEHGIFHHNAATGAIDNRTCGLCSAGFNSVLELLKHYIFHVCKQLFFCTICQVSFVSLDSLQNHQRGSEAHRQIDKYKQAGLADGDTDESSLFVELDRPGVMDRLQKVLAQRMIYRTTPMRGLLVPDTKFIAQEVEYNTYRKLKMSGERCCACGRFFETIEEMLEHARLAHFRPIVNVASFWDGGHQCNYCLSQFESKRGLQMHWAYRRKGNITLYGCKLCGLVFSRMFCLARHMQLAPNHLSKLMHEAARDTNDEEQLRTVDQSTDDDADDDAAAGGSKKRKVKLKQDPRVAEALELHPSIKVEKVGHQIGYHCCFAKCTQTFQEEQELLQHTVAEHEGKRKEYESERTSAKHVCPTCCKSYDTQRKLNWHRFQRFVPRQYNCKHCDLQFTKWPLLQVHIATDHLGKPPSFPCAKCGKEFITRSRLKAHEKVHEEVKQFVCDECGDRFRHKGLLVRHRRATHTTELRFECKLCSKKFAVVEKLKVHQRVHTGYRPYQCQHCDRSFSHHSDRKRHEMAAHTGVRPHRCTICSASYIRNRDLVLHMRKHSSIGETREETSEELMEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -