Basic Information

Insect: Anopheles albimanus
Gene Symbol: -
Assembly: GCA_013758885.1
Location: NC:18034566-18040025[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.9 91 3.2 0.1 6 23 221 238 219 238 0.86

2 19 1.2 55 3.9 2.6 1 23 244 267 244 267 0.94

3 19 0.015 0.69 9.8 0.5 3 23 275 296 274 296 0.93

4 19 0.0004 0.019 14.7 0.3 1 23 302 325 302 325 0.98

5 19 9.4e-06 0.00044 19.9 2.3 1 23 331 353 331 353 0.98

6 19 0.00036 0.017 14.9 2.1 1 23 359 381 359 381 0.97

7 19 0.00084 0.04 13.7 4.6 1 23 386 409 386 409 0.97

8 19 0.019 0.91 9.5 1.2 2 23 678 700 677 700 0.96

9 19 0.002 0.093 12.6 1.6 3 23 708 729 707 729 0.92

10 19 0.00017 0.0081 15.9 3.4 1 23 735 758 735 758 0.98

11 19 8.1e-06 0.00039 20.1 0.3 1 23 764 786 764 786 0.98

12 19 0.0048 0.23 11.4 1.2 1 23 792 814 792 814 0.97

13 19 0.00084 0.04 13.7 4.6 1 23 819 842 819 842 0.97

14 19 0.0096 0.46 10.4 0.6 2 23 1119 1141 1118 1141 0.96

15 19 7.6e-05 0.0036 17.0 0.8 2 23 1148 1170 1147 1170 0.96

16 19 1.7e-05 0.00082 19.1 1.7 1 23 1176 1199 1176 1199 0.98

17 19 5e-06 0.00024 20.8 0.3 1 23 1205 1227 1205 1227 0.98

18 19 0.00035 0.016 15.0 0.7 1 23 1233 1255 1233 1255 0.97

19 19 0.0004 0.019 14.8 3.1 1 23 1260 1283 1260 1283 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.9	91	3.2	0.1	6	23	221	238	219	238	0.86
2	19	1.2	55	3.9	2.6	1	23	244	267	244	267	0.94
3	19	0.015	0.69	9.8	0.5	3	23	275	296	274	296	0.93
4	19	0.0004	0.019	14.7	0.3	1	23	302	325	302	325	0.98
5	19	9.4e-06	0.00044	19.9	2.3	1	23	331	353	331	353	0.98
6	19	0.00036	0.017	14.9	2.1	1	23	359	381	359	381	0.97
7	19	0.00084	0.04	13.7	4.6	1	23	386	409	386	409	0.97
8	19	0.019	0.91	9.5	1.2	2	23	678	700	677	700	0.96
9	19	0.002	0.093	12.6	1.6	3	23	708	729	707	729	0.92
10	19	0.00017	0.0081	15.9	3.4	1	23	735	758	735	758	0.98
11	19	8.1e-06	0.00039	20.1	0.3	1	23	764	786	764	786	0.98
12	19	0.0048	0.23	11.4	1.2	1	23	792	814	792	814	0.97
13	19	0.00084	0.04	13.7	4.6	1	23	819	842	819	842	0.97
14	19	0.0096	0.46	10.4	0.6	2	23	1119	1141	1118	1141	0.96
15	19	7.6e-05	0.0036	17.0	0.8	2	23	1148	1170	1147	1170	0.96
16	19	1.7e-05	0.00082	19.1	1.7	1	23	1176	1199	1176	1199	0.98
17	19	5e-06	0.00024	20.8	0.3	1	23	1205	1227	1205	1227	0.98
18	19	0.00035	0.016	15.0	0.7	1	23	1233	1255	1233	1255	0.97
19	19	0.0004	0.019	14.8	3.1	1	23	1260	1283	1260	1283	0.97

Sequence Information

Coding Sequence: ATGGAGGTTTTAGGAGAAATTAGTAATTTTTGTCGTTTTTGCCTGAGCCAGGACTGCGAAAACCTGATGCCACTATCCAGCGCCATCGAAAGCCTTTCCTTCTCAGTGCAAGATATACTGGAAACGACCGGTATTTCGATTCTTGAAAACGAAATCACATGCCTTGTAGTCTGTGCCCCGTGCAGTAACCAAATTGAACTCGCGGTGGATTTTCGTCGTACCTGCCTAGATGGAAATGTTCTGTTTATGCAGCTTTTCGGTCATATTATTGACAAGATTCGCTCATCCGACATCGTGGAAGAGGATGTAGAGGAAGCGGTGGATGCAAAGAACGATCCTTTACAGATCGAAATAACTCTACAACACGAACCGCCGGATGAAAACATCTATGAAACACAGGATGCCCCGTCTTTGCCAGAGTCGATAGAAGTATTCGATGAGGATGACCGATGTGAAGATCAAAACAGCAGTTCCGAAGATCTTTCAGATGTCCTCACAAATACGTTAGGATCAAACGGAAAACTCGTTAATCCTGGAGTAGCTGCTACCGTAACAAATTGTAGAAAGGcgaaatcaaacgaacgagtagaggaaagcgaagaaggcaaagcaaccaaaccaacgaaacgaaagtattccgggaaaaacagaaaacaattgTGCGGTATTTGTGGTGCACTAGTGTACAATTTGCAAGACCACACACGATCGCATACTAAGGAAAACCTCTATCAATGTCCACACTGCACCGCACAAATGACTTGCGAGTCAAATATGCGATCGCATATACGTTTAGTACACGagaaaaaaattattaaatctTGTGAACCGTGCGACAAGGGATTCTTCACATATAGCGCCTATAGATTGCATATGTTAAAACAACACAATATCGGCAAGCAGTACCAGTGTGAAATCTGCCCCAGAATATTCAACACAACAGCTAGCCGTCTGGACCATATAAGGCGAATGCATATCAGAGAATTTAAGTTTGAATGCCAGATTTGCCAGAAAAAGTTCAAAGATCCGAATACGCTGAGACACCATGGAAGGGTACACTCTACCAACGCTCCCTACGCCTGTAGCCACTGTCCGAAGCGGTTCAAGTCTCCATACGCGAAAAAAACTCACGAAATTACACACAGTGGCATCATGTTCCCATGTACACTTTGCAACAAGGAGTACCGGTACAAGAGCCTACTCAGCATGCATTACCGGAAATGCCACCCGACGGAGAGTAGCGGCGAGTCACTGTTTGGTAAACTTGGATGGGTGCATATTCATACGATGGAGGTTTTAGGAGAAATTAGTAatttttgtcgcttttgccTGTGCCAGGACTGCGAAATCCTGATGCCACTATCAAGTGCCATCGAAAGTCTTTCCTTCTCGGTGCAAGATATACTGGAAACGACGGGCATTTCGATTCttgaaagcgaaaccacaTGTCTTGTCGTCTGTGCCAAGTGCAGCAACCGCATTGAACTCGCGGTGGATTTTCGTCGTACCTGCTTAAATGGAAATGTTCTGTTTATGCAGCAGTTCGGTCATATTATTGACAAGCTTCGCGCATCCGACATCGTGGAAGAACATGTAGAGGTCACAACATGCGTAAAGGACGACTCTTTGGTAATCCAAATGGCATTACAAAATGAATTGAAGTATGAAAATTCGTTTGACGCGCACAATGAACCAGCAGTACCGGTAGAAGACTCACAAGAACTGTTGGATAAGCTTACAACTAGCGGACAAGAGGATTGTAAAGATGAAGACAGCTGTTCCGAGGATCCTTCGCCTATGGGTTCGAATATGTTTACATCACAAGGCATAACCACGAATACGGGAGTAGCTGCTACCATATCAAATcaaagaaaagcgaaatcaaaAGAACGATTTGGAAATAGTGAAACAgatgaagcaaacaaatcgtacACATCCGGAAAACGCCAAAAGCTGTTGTGCGTTATTTGTGGTGCATTAGTGTACAATATTATCGACCACACACGATCGCATACAAAGGAAAACCTTCTTAAATGCCCTCACTGCCCTGTGCAGATGGCCAATCGTACTAACCTGGTGCGACATGTGCATACGGTACACGAGAAAAAGATTATTAAATCTTGTGAACCGTGTGGCAAAGGGttcaccacacacaacacttaCAAATCGCATATGCGAGCGTACCACAATATCGGTGCACAGTACCAGTGTGAAATCTGTCTCAAAATGttcaaacatttttcaaatcgcCGAGAGCATATAAGGCGAATTCATATCGCCGAATGGAAGTATGAATGCCAGATTTGCCAGAAAAAGTTCAAAGATCCGAATGGGCTGAGAGATCATGGAAGGGTACACTCTACCAACACTCCCTACGCCTGTAGCCAGTGTCCGAAGCGGTTCAAGTCTTTAttcgccaaaaaaacacacgaaaTTACACACAGTGGCATCATGTTCCCTTGTACACTTTGCAACAAGGAGTACCGGTACAAGAGCCTACTTAGCATGCATTACCGAAAATGCCACCCAGCGGAGTGTGACGACGAATCACACTCTAGCCGAGAAACCCAAATGGTGACCACTAATATTGTAATGGAAAATATAATAACTTTGGTGCTTGTTCTTACGATGGAGGTTTTAGGCGAAATTAATAGCTTTTGTCGCTTTTGCCTGAGCCAGGACTGTGAAGTCCTGATGCCACTATCCAGCGCCATCGAAagcttttccttctcgttgcaAGATATACTGGAAACGACCGGTATTTCGATTCTTGAAAACGAAATCGCATGCCTTGCCGCCTGTACCAAATGCTGCACCCTCATCGTACTTGCGGCGGATTTTCGCCGTTCCTGCCTAAATGGAAATGTTCTGTTTATGCAGCTTTTCGGTCATATTATCAACAAGCTTCGCTCATCCGACATCGAGGAAGAGAATCTTGAGGACGCGGTAGATGTAGATAGAAAGAACGATCATTTAAAGGTCGAAATAACTCTACAAATCGAACCACCCAATGAAACAATCTATGAAAAGCACAACGAATCAGTATTGCTAGTAGAAGAGTCACAGGAGCTGTTGCAAGAGCCACAGCTAACAATCAATGAACAGGAagataatgaagatgaaatttGCCTTTCCAAGGATCTTCCACAAGTGCACACATTAAGATCTAAAAAGAAAGCTACTAGTATGAAAGAAGCTGCTAACAAATCGTTTCATAGAAAGGCGAAGTCAAAAGAACGGgtgaaaaaatcaaacaaatcagcGGCCCGCCAAAAACAACTGTGCGGTATTTGCGGTGCACTAGTGTACAATATGATCGAACATACACGATCGCATACCAAGGAAAACCTTCTCAAATGTCCACACTGTCCTGTACAGATGGTAAATAACGCCAACCTTGCGAGGCATGTGCATACAGTACACgagaaaacaataattaaatCTTGTGAATCTTGTGGCAAGGGGTTTATCACATTGGACTCCTACAAAACGCATTTGCGAACGTACCACAATATCGGCAGGCAGTACCAGTGTGAAATCTGTcttaaaattttcaaacatCCTTCAAACCGCCGAGAACATATAAGGCGAATTCATATCGCCGAATGGAAGTATGAATGCCAGATTTGCCAGAAAAAGTTCAAAGATCCGAATGCGCTGCGAGAACATGGAAGGGTACACTCTACCAACGCTCCCTACGCCTGTAGCCAGTGTCCGAAGCGTTTCAAGTCTCCATACGCGAGAAAAACGCATGAAATTACACACAGTGGCATCGATTTCCCATGTGCACTCTGCAACAAAGTGTATCGCTACAAGACCCTGCTTAACATACATTACCGGAAATGTCATCCAGCGGAGTGTAGCGGGAAATCAACCGAGCAGAGGTGA
Protein Sequence: MEVLGEISNFCRFCLSQDCENLMPLSSAIESLSFSVQDILETTGISILENEITCLVVCAPCSNQIELAVDFRRTCLDGNVLFMQLFGHIIDKIRSSDIVEEDVEEAVDAKNDPLQIEITLQHEPPDENIYETQDAPSLPESIEVFDEDDRCEDQNSSSEDLSDVLTNTLGSNGKLVNPGVAATVTNCRKAKSNERVEESEEGKATKPTKRKYSGKNRKQLCGICGALVYNLQDHTRSHTKENLYQCPHCTAQMTCESNMRSHIRLVHEKKIIKSCEPCDKGFFTYSAYRLHMLKQHNIGKQYQCEICPRIFNTTASRLDHIRRMHIREFKFECQICQKKFKDPNTLRHHGRVHSTNAPYACSHCPKRFKSPYAKKTHEITHSGIMFPCTLCNKEYRYKSLLSMHYRKCHPTESSGESLFGKLGWVHIHTMEVLGEISNFCRFCLCQDCEILMPLSSAIESLSFSVQDILETTGISILESETTCLVVCAKCSNRIELAVDFRRTCLNGNVLFMQQFGHIIDKLRASDIVEEHVEVTTCVKDDSLVIQMALQNELKYENSFDAHNEPAVPVEDSQELLDKLTTSGQEDCKDEDSCSEDPSPMGSNMFTSQGITTNTGVAATISNQRKAKSKERFGNSETDEANKSYTSGKRQKLLCVICGALVYNIIDHTRSHTKENLLKCPHCPVQMANRTNLVRHVHTVHEKKIIKSCEPCGKGFTTHNTYKSHMRAYHNIGAQYQCEICLKMFKHFSNRREHIRRIHIAEWKYECQICQKKFKDPNGLRDHGRVHSTNTPYACSQCPKRFKSLFAKKTHEITHSGIMFPCTLCNKEYRYKSLLSMHYRKCHPAECDDESHSSRETQMVTTNIVMENIITLVLVLTMEVLGEINSFCRFCLSQDCEVLMPLSSAIESFSFSLQDILETTGISILENEIACLAACTKCCTLIVLAADFRRSCLNGNVLFMQLFGHIINKLRSSDIEEENLEDAVDVDRKNDHLKVEITLQIEPPNETIYEKHNESVLLVEESQELLQEPQLTINEQEDNEDEICLSKDLPQVHTLRSKKKATSMKEAANKSFHRKAKSKERVKKSNKSAARQKQLCGICGALVYNMIEHTRSHTKENLLKCPHCPVQMVNNANLARHVHTVHEKTIIKSCESCGKGFITLDSYKTHLRTYHNIGRQYQCEICLKIFKHPSNRREHIRRIHIAEWKYECQICQKKFKDPNALREHGRVHSTNAPYACSQCPKRFKSPYARKTHEITHSGIDFPCALCNKVYRYKTLLNIHYRKCHPAECSGKSTEQR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -