Aali003426.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles albimanus
Gene Symbol
grau
Assembly
GCA_013758885.1
Location
NC:55597160-55602425[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.51 24 5.0 1.0 3 23 214 235 212 235 0.95
2 29 6.2e-05 0.0029 17.3 2.1 1 23 267 290 267 290 0.95
3 29 0.026 1.2 9.1 6.5 1 23 298 320 298 320 0.97
4 29 0.0011 0.052 13.4 0.0 3 23 325 346 324 346 0.96
5 29 0.00044 0.021 14.6 1.1 3 23 354 374 352 374 0.96
6 29 0.0076 0.36 10.7 0.3 1 23 383 406 383 406 0.97
7 29 0.81 38 4.4 1.1 1 23 413 438 413 438 0.96
8 29 4.2e-05 0.002 17.9 0.6 1 23 443 465 443 465 0.95
9 29 0.025 1.2 9.1 3.1 1 23 471 494 471 494 0.98
10 29 0.092 4.4 7.3 1.0 2 23 682 704 681 704 0.96
11 29 0.28 13 5.8 0.1 6 23 713 730 713 730 0.99
12 29 0.55 26 4.9 3.4 2 23 735 757 734 757 0.93
13 29 0.00045 0.022 14.6 4.2 1 23 765 787 765 787 0.99
14 29 0.0024 0.12 12.3 0.5 2 23 791 813 791 813 0.95
15 29 0.0028 0.13 12.1 0.1 3 23 821 841 819 841 0.96
16 29 0.0021 0.1 12.5 1.8 2 23 851 873 850 873 0.95
17 29 0.11 5.2 7.1 1.5 1 23 880 903 880 903 0.97
18 29 6e-06 0.00029 20.5 0.6 3 23 910 930 908 930 0.97
19 29 2.7e-05 0.0013 18.5 0.3 1 23 936 959 936 959 0.98
20 29 1.2 55 3.9 0.1 2 23 1213 1235 1212 1235 0.94
21 29 0.24 11 6.0 0.2 6 23 1244 1261 1244 1261 0.96
22 29 0.00032 0.015 15.1 0.4 2 23 1266 1288 1265 1288 0.95
23 29 0.00075 0.035 13.9 2.9 1 23 1296 1318 1296 1318 0.97
24 29 0.0019 0.09 12.6 1.9 2 23 1322 1344 1321 1344 0.93
25 29 9.8e-06 0.00046 19.8 0.2 3 23 1352 1372 1350 1372 0.96
26 29 0.0003 0.014 15.2 1.4 2 23 1382 1404 1381 1404 0.95
27 29 0.0094 0.45 10.4 1.3 1 23 1411 1434 1411 1434 0.97
28 29 1.4e-07 6.7e-06 25.6 1.7 1 23 1439 1461 1439 1461 0.98
29 29 0.0003 0.014 15.2 1.5 1 23 1467 1490 1467 1490 0.96

Sequence Information

Coding Sequence
ATGGAAGAGTTTATGGAAAGGTGCCGTTTGTGCCTGCAGCACGGTGAGGGTGTGATGGTTTCCCGTATCGAGGAGCTTCCGCCTGTGTTTACCTTCCAGCTGGATCCCGACTGTTCGCTTCCGGTTAATGTTTGCCGGGAGTGCTTTGGCCAGGTAGAAGATTACTACAGCTTCTCCAATGCGGTGCTACGGAACCAGGAGAAGCTACGCGAATTACACGCACAACTGAAAACGGAATTCATACCGGTGGAGGAGATTAAGGAGGAATCGCCCTATGAAACAGACGCCATCGGGGCCGCCTCCGCTTTAGAGACTGAAGATAATGAGCTTCACATGAGTCAAGTGAGTGCTGAAAGTTATGAGCTAACGTGTCAGCAATCGCAGGATGTCGGAACGATCGTCAGTAATACATCAAAAGATCTCGAGATAGAAGAAATTGATCATGAACTGGTGGCCAATCAGGATCACCAGCATAGTGAAGATGAGTACGACGAACCCCACCAAGAGCAAGAATCCGAAGAGAGCGCAGAAGACACATTGGACAAAAAGTGTCCTAAAAAAACGCAAGCAATCAAAAGTGAAGCTGCAATGAGAGTGcagcaagaaaacgaaatgattgCCGATTATTTTCAGCTCGATTGTGAACTGTGTTCTCACAGAGCGGATAACTTCGTGGCTCTGAAAAAGCACTACCGCGTGCGGCATAATCGCAGCGGTTACGTGCGCTGTTGTGAGCGCAAACTGTTCAAACGCTGCGATCTGCTGGAGCATCAACAGGTGCACCTCAATCCAAAACAGTTTGCCTGTGATCTGTGTGGTAAGCAGTACCGCTCGAAGGAGTATTTACAACGGCACCATCAACAGGCCCACGATTCCAGCGCGGAACGCAAATTCAAATGTAGCGAGTGTCATCGTAGCTTTCTGCATCGGTTTCAGCTCAATTCGCACCTTGTGCGACATGTGAAGGCACCGTGCCCGCAGTGTGACAAAATCCTTTCCAGTAAGGCGGCACTCGGTATTCACATGCAGAAGATACACAGCACCGAGGGGCGCATGATATGCGATACCTGTGGCCGCGAATTTCGTACCAAGCTGTCGTTCACGAAGCacgtccagcagcaccagggtaCGTACGTGCCGGAACAATATCGCTGTGATTACTGTAGCGCACTGCTGGCTAGCAAAGTAAGCCTCAAGAAGCACATTCTGGTGAAGCACAAAACGACGGACGAGGAGTATGTCTGCACGAAGTGCAATAACGGGAAACGGTACCCAAATAAGCTGGCCTTCGACAGCCACAAGCGGAAGGTGCACGTCGAGAAGAAGCACGCGTGTGATTTCTGTGGTCGCGGGTTTAAGGATGCGAAAAATCTACGTGAACATCGGGCCGTTCATTCCGGCGAGGATCTGTACCGGTGCGAGCACTGCACGGTTGCCTTTAAATGGAAGTCCAACATGTACGCTCACACGAAAAAGCAGCATCCCGACGAATGGGCAGCAGCCAAGCGGAAGGCGGCAACGATTGTGTACTTGTTTGAAATGACAGACCGAGCTACTCTGGTTGTTCCAGACTCAAATACGGTGTTTTGGATACAATCAGTAAGTGAAATCATGAATGACGAGCAGTGCCGGTTGTGCTTGGAAAGGTGCACACCTGGGGCGCGTACCTCAATCGAAGACGCTGCATTTCGACAAATCTCAGCAGATGTGTTCTCGTTTGCGATCGAAACTCTACCCACACTGCCGAAGCTGGTATGCACTGCATGCTTCGATCGTATAAACGATTTTCACGTGTACTCCGTGCAAGTGCGTACCAACCAAGAGTTTCTGGTTAAACATTCCACGGAGAAGGCATCAATGTTTGAAATGGTCAAAGTACAAGGACCTATGGAGGAACAGATGCTTGAATTGGAAGTATGCGCTAGTGATATAGtcgaggaaaagaaggaaagcgtAGAAGTGCTCAATGAGGTTCACGATCCTACCGTTCAGGGCAAAACGCACAATCAGGAGGATGATCTAATACGGGCGTACTATGATATGAAGTGTGAGATCTGTTCGAccgagctcgatacattcgcGAAACTGCAGCGGCACTTCAAAAAGGAACACAGCGAACGTGGCTATGTACGCTGTTGCGAAAAGGTATTGACGAAACGATCGCAGGTTCTCGAGCATATCAGGATGCACGAAGGATCGTTGCGTTGCAATCTGTGTCAGAAAAGCTACAAATGCAACCGAACGCTAGAGCTGCACAAGCTGATTTACCACGGTAAGCAGAAAGACAAGCCATTCAAGTGCGACAAGTGCCATCAGGCCTACCCAAAGCAACATCTGCTTACTGCCCACCTGCAGCGACACGTGCAGGAGCAGTGCACGGTGTGTCGGAAGACGCTATCGAACTATCAGGCACTGAAAGTGCACATGGCCCAGATGCATGGGCGTGATAATCAGCAGATTTGCGCTACCTGTGGTGTGGCGTTCCGCACCAAGCTCGCGATGGAGCGCCACATCAAGGAGCACCGTGGCGAGCAAAGCATTGAAAAGGTGCAGTGCCATATTTGCAGCAAATGGTTCAACGGGAAGAGCAATGTGAAGAAGCACATCCGTTTCATTCACGCAGAGCAGGGACAGGAGTTTCAGTGTGAAATCTGCTTGCACAAGTATCCCAACACCCGTGCCCTGATTTACCACAAGCAGCGGGTGCACGTGGAAGAAAAGTTCGGCTGCGAATACTGTGGAAAGCGTTTTAAGCGGAAAATATATCTTAAAGAACATATTGCCTCGCACACGGGGCAGCCGCTGTACTCTTGCGAGGCTTGCGGAGCCACCTTCAACTCCAACGGTAATCTGTACGCCCATCGGCGCACCAAGCATCCTACGGaaaagaaggagcagaaagcAGCACAAACTGGGCTGCAAGATTTAGATAATCTCAGCACCCACAATCAAggcaaaatgaaggaaaagtgtCGATTATGTTTAACTCTGCTGGAGTGTGGCGATTCTATTTCACTGTCGGATTCCGATTTTTATACGAAACTAGCAACGTTGTTTCAATTCAGTATACTCGTCGACAATGCTCTGCCGAATCAAGTTTGCTTCGGATGCCAAACGTCTGTGAACTCGTTCTACACCTTTCATCAGGATGTGGAAGCCaaccaaatgctgctgctggcgctgcagaACGACAAAGATCCGATTGCCAACTTCCTGCCCGAATCCAGAGTGGAGGAGTGTGTTGTTGAGATCCTACAGGAAACGCCacacaatgatgatgataacgacgaagacgacgaggaggagaaggaggaggatagTGCATCACAGCTGGTAGAATACGAACAGGATGTGGATATTCGCAACAATGACGACAGCTTGGATAATGAAGCGCTCGCGAGTGGAGACGATGGATGCAGTGAAAAGGCCAATTTAAAGACTGAAATTGAAGCAACAAGTCAAGAGGTGGTGGCTGTAGCTCGTGAAGGTGAAGAGGAAGTTAAACCACGACGAAGAGGACGCCCCCCAGGGAAGCGTAACAGCAAGAAGAGCGACAGCCCTGCTAAGAAATCGGAAccaaaaaagcaaagcaatgACAGCGAGAAGGAAGGCCGGATAGCGGAGTATGTCAGCTTGGAGTGTGAGCTCTGTCTAATGTCTTTGGATAGCTTTATACAGTTGCAAATTCACTACCGTGAAGCACATAACACTGCGGGGTACGTGCGATGCTGTAATAAGCAGTTCTTTCGGCGGTATCTTCTGCTCGACCACATTGCCGCCCACATTGGTACGATACGGTGCGAAATATGCCAGAAGACCTACAAATCAAGCCGCTACCTGGGGTTGCACATGGCCAAAGCCCATGGCAGCGAAGAGGATCGACCCTACAAATGCGAAGTGTGTCATCTTTCCTTTCCTAAAACGTATCTCCTGAAAACGCACCAAACGTTGCATGTTCGGAAGCAGTGCCACTTGTGCAAGAAGGTGCTGTCGAGCCAGCAATCGCTGAAGGTACACTTGGCACAGATGCACAGCGACGATAACCAGCAGATTTGTGCCATCTGTGGCAAGGTGTTCCGTACAAAGCAAGCCATGGAGCGGCATATCAAGGAGCATCGGGGGGAACAGCTGGTAGACCGGATGCAGTGCGAGTATTGCAAGAAGTGGTTCAACGGAAAGTACAATCTGCGGAAGCATATCCGTTTCATCCACAACGAGGATGGACAGGTGTTCCGGTGCGATATCTGCCAGCACGAAAGCCCCAATAGCCGCGCGCTGCAGAATCACAAGCAGCGCATACACGTGGAGGAGAAGTTCCAGTGTACGTACTGTGGCAAGCGGTTTAAGCGGAAGCCCAGCCTGCGCGAACACATGGCCTCTCACACCGGAAAACCACTCTATTCGTGCGAAATCTGTGGCATTACCTTCAACTCGAAAGCCAATCGTTTTAGCCATCGCAAAAATAAGCATCCCGTCGAGTGGGAAGCTAACAAGCGGTTAAAGGAGCAGAGAGAGTTGAGTAAGAACTAA
Protein Sequence
MEEFMERCRLCLQHGEGVMVSRIEELPPVFTFQLDPDCSLPVNVCRECFGQVEDYYSFSNAVLRNQEKLRELHAQLKTEFIPVEEIKEESPYETDAIGAASALETEDNELHMSQVSAESYELTCQQSQDVGTIVSNTSKDLEIEEIDHELVANQDHQHSEDEYDEPHQEQESEESAEDTLDKKCPKKTQAIKSEAAMRVQQENEMIADYFQLDCELCSHRADNFVALKKHYRVRHNRSGYVRCCERKLFKRCDLLEHQQVHLNPKQFACDLCGKQYRSKEYLQRHHQQAHDSSAERKFKCSECHRSFLHRFQLNSHLVRHVKAPCPQCDKILSSKAALGIHMQKIHSTEGRMICDTCGREFRTKLSFTKHVQQHQGTYVPEQYRCDYCSALLASKVSLKKHILVKHKTTDEEYVCTKCNNGKRYPNKLAFDSHKRKVHVEKKHACDFCGRGFKDAKNLREHRAVHSGEDLYRCEHCTVAFKWKSNMYAHTKKQHPDEWAAAKRKAATIVYLFEMTDRATLVVPDSNTVFWIQSVSEIMNDEQCRLCLERCTPGARTSIEDAAFRQISADVFSFAIETLPTLPKLVCTACFDRINDFHVYSVQVRTNQEFLVKHSTEKASMFEMVKVQGPMEEQMLELEVCASDIVEEKKESVEVLNEVHDPTVQGKTHNQEDDLIRAYYDMKCEICSTELDTFAKLQRHFKKEHSERGYVRCCEKVLTKRSQVLEHIRMHEGSLRCNLCQKSYKCNRTLELHKLIYHGKQKDKPFKCDKCHQAYPKQHLLTAHLQRHVQEQCTVCRKTLSNYQALKVHMAQMHGRDNQQICATCGVAFRTKLAMERHIKEHRGEQSIEKVQCHICSKWFNGKSNVKKHIRFIHAEQGQEFQCEICLHKYPNTRALIYHKQRVHVEEKFGCEYCGKRFKRKIYLKEHIASHTGQPLYSCEACGATFNSNGNLYAHRRTKHPTEKKEQKAAQTGLQDLDNLSTHNQGKMKEKCRLCLTLLECGDSISLSDSDFYTKLATLFQFSILVDNALPNQVCFGCQTSVNSFYTFHQDVEANQMLLLALQNDKDPIANFLPESRVEECVVEILQETPHNDDDNDEDDEEEKEEDSASQLVEYEQDVDIRNNDDSLDNEALASGDDGCSEKANLKTEIEATSQEVVAVAREGEEEVKPRRRGRPPGKRNSKKSDSPAKKSEPKKQSNDSEKEGRIAEYVSLECELCLMSLDSFIQLQIHYREAHNTAGYVRCCNKQFFRRYLLLDHIAAHIGTIRCEICQKTYKSSRYLGLHMAKAHGSEEDRPYKCEVCHLSFPKTYLLKTHQTLHVRKQCHLCKKVLSSQQSLKVHLAQMHSDDNQQICAICGKVFRTKQAMERHIKEHRGEQLVDRMQCEYCKKWFNGKYNLRKHIRFIHNEDGQVFRCDICQHESPNSRALQNHKQRIHVEEKFQCTYCGKRFKRKPSLREHMASHTGKPLYSCEICGITFNSKANRFSHRKNKHPVEWEANKRLKEQRELSKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-