Aali003496.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles albimanus
Gene Symbol
-
Assembly
GCA_013758885.1
Location
NC:15309465-15318410[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 42 0.00028 0.013 15.2 1.7 1 23 20 42 20 42 0.97
2 42 3.1e-07 1.5e-05 24.5 0.4 1 23 48 71 48 71 0.97
3 42 0.0018 0.087 12.7 0.3 1 23 77 99 77 99 0.98
4 42 0.19 8.9 6.4 0.8 3 23 107 127 107 127 0.97
5 42 1.2 56 3.9 0.1 1 12 133 144 133 149 0.84
6 42 0.44 21 5.2 0.5 1 23 169 193 169 193 0.94
7 42 0.032 1.5 8.8 0.1 1 23 198 220 198 220 0.95
8 42 0.0033 0.15 11.9 2.7 2 23 227 248 226 248 0.96
9 42 0.13 5.9 6.9 0.6 2 23 253 274 252 274 0.96
10 42 0.00028 0.013 15.2 1.7 1 23 280 302 280 302 0.97
11 42 3.1e-07 1.5e-05 24.5 0.4 1 23 308 331 308 331 0.97
12 42 0.0018 0.087 12.7 0.3 1 23 337 359 337 359 0.98
13 42 0.19 8.9 6.4 0.8 3 23 367 387 367 387 0.97
14 42 0.0053 0.25 11.2 0.2 1 23 393 415 393 415 0.98
15 42 1.6 77 3.4 0.1 2 14 495 507 494 508 0.90
16 42 1.8 85 3.3 0.2 2 23 724 747 723 747 0.91
17 42 0.062 2.9 7.9 0.1 1 23 752 774 752 774 0.95
18 42 0.018 0.84 9.6 0.5 2 23 781 803 780 803 0.93
19 42 0.029 1.4 8.9 0.8 2 23 811 832 810 832 0.96
20 42 0.0083 0.39 10.6 1.3 1 23 838 860 838 860 0.98
21 42 1.7e-05 0.00081 19.1 1.0 1 23 866 889 866 889 0.96
22 42 0.0078 0.37 10.7 1.3 3 23 900 920 898 920 0.98
23 42 0.0071 0.34 10.8 1.1 1 23 926 948 926 948 0.96
24 42 8.4e-05 0.004 16.9 0.9 1 23 954 976 954 976 0.98
25 42 1.6 77 3.4 0.1 2 14 1060 1072 1059 1073 0.90
26 42 0.44 21 5.2 0.5 1 23 1291 1315 1291 1315 0.94
27 42 0.61 29 4.8 0.1 1 23 1320 1342 1320 1342 0.95
28 42 0.0015 0.073 12.9 1.1 2 23 1349 1370 1348 1370 0.95
29 42 0.55 26 4.9 0.6 2 23 1375 1396 1374 1396 0.95
30 42 0.00065 0.031 14.1 1.7 1 23 1402 1424 1402 1424 0.97
31 42 8.4e-06 0.0004 20.1 0.5 1 23 1430 1453 1430 1453 0.98
32 42 0.00017 0.0083 15.9 0.4 1 23 1459 1481 1459 1481 0.99
33 42 0.19 8.9 6.4 0.8 3 23 1489 1509 1489 1509 0.97
34 42 0.0053 0.25 11.2 0.2 1 23 1515 1537 1515 1537 0.98
35 42 0.092 4.4 7.3 6.6 1 23 1838 1860 1838 1860 0.98
36 42 0.00067 0.032 14.1 1.1 3 23 1868 1888 1867 1888 0.97
37 42 0.3 14 5.7 0.3 3 23 1894 1914 1893 1914 0.96
38 42 0.00071 0.034 14.0 0.4 1 23 1920 1942 1920 1942 0.98
39 42 0.11 5.3 7.1 6.6 1 23 1948 1971 1948 1971 0.94
40 42 7.2e-05 0.0034 17.1 0.1 1 23 1977 1999 1977 1999 0.98
41 42 0.025 1.2 9.1 0.6 3 23 2007 2027 2007 2027 0.98
42 42 0.0043 0.2 11.5 0.1 1 23 2033 2055 2033 2055 0.98

Sequence Information

Coding Sequence
ATGGATGATTATAACAAGCTGCGGATTCACATGAAAATCCACGAGAAAGTTAAACCATTTGCCTGTAATTTATGCCCTAGCCGGTTTCATACTCAAGCTAATTTGAAGGCCCATTTAAAAAGGcatgaaaatggaagaaatttCCCGTGTGAAGTATGCGGGAAGCGCTTATCAACAAATagcaatttaaaaaatcatcaGCGTATGGTGCACATGGGCGAGAAAAATTTCAGATGCCAAATTTGCGGTATGAGAATTGGCACCAAAAGACAAATGGCACAACATATGATAACGCATACCGGAGAAAGACCTCATGGTTGCATGTTCTGCGATCGACGATATGGTGCTCTAAACGATTTGAAGGACCACTTACGGAAACATCTCGGCGACAATATCTATCagtgcgatcggtgcgatgccTCTTTTCGGTTGATTAGGAACTTAGGAACATTACGCGTTAGAGTGTTTAACGATGAAATACCTGAATTgcaccgaaagaagaagcatcGTTGCCCGTTTTGTGAAGAAGAAATCTATTCATCGCAAATTCTGTTAAATCAACACTTGAAAGAGTTGCATTCGgataaaattttcatttgcaaccCGTGCGATAGAGTATTTGTGGATGAAGAAACGTACAACGTTCATGAAAAATACCATTCTTTGGATCGGTGTTGCTTCTGTACGATCTGTGAAAAAGGTTTTGGAAACCCAAGATGTCTAATTGACCACATTAAATCACACGAGTATTCATGCGTTTGTCCATCTTGTGGGGTAAAAATGGATGATTATAACAAGCTGCGGATTCACATGAAAATCCACGAGAAAGTTAAACCATTTGCCTGTAATTTATGCCCTAGCCGGTTTCATACTCAAGCTAATTTGAAGGCCCATTTAAAAAGGcatgaaaatggaagaaatttCCCGTGTGAAGTATGCGGGAAGCGCTTATCAACAAATagcaatttaaaaaatcatcaGCGTATGGTGCACATGGGCGAGAAAAATTTCAGATGCCAAATTTGCGGTATGAGAATTGGCACCAAAAGACAAATGGCACAACATATGATAACGCATACCGGAGAAAGACCTCATGGTTGCATGTTCTGCGATCGACGATATGGTGCTCTAAACGATTTGAAGGACCACTTACGGAAACATCTCGGCGACAATATCTATCagtgcgatcggtgcgatgccTCTTTTCGGTTGATTAGGGAACTTAGGGAACATTACGCGGTCCATTTCCAAGATGGTGCGGAGATTACTGCGTTGAACTCATCGGATTTCCGCTTTACGCTAGAGTACATAGTGAATCTGCGTCGCCAGAAAGAGCTATCCAAATTGCATGTGGATGAGAATCATTCTGTGGTTGAGCTAAACAACATGCTCGAGAAATTCTGCCGTATCTGCTTAACGGCGACGGGTGTGGAGTACAGCATGGACGAAGCCATCGACAGCAAAACTTCGTTGTATAGCGTGGTTTGCAAACTGTGCCCTGAAGCATTCCCCGACAAGAGCAGTGAATGGTCAAGGCTTGTTTGCCAACAATGTAGACAAAGCATCTTAAATGCTCAAGAGCTATACGATCTTTGTAAGTTAAGCATTGAATGTTTCGAGGAGCTTTATTCCAAGGAAAAGTGCAGAACACCGAGTTTAAGCGAGAATTTCGCGGAAGAAGAGCAATGCGAGTCTCGTCCTGACATGAACGATATAGACGTGCTAGAGGAAGACGCCGAGATCGTAAGATCATTTCTCGGATTAAACAAGGATATAAATGATGCTCCAAACACCGATTTTTCCACGGAAGAAACACTTTCCTCCAAGCCTAGTTGGATGGTATCTACGAGCGGAGATCAGTTTTCAGTAGATTCATCTCATGACCAAGATGAATTCCTCGATTCATGTGTCTCAGACgaacagaaaacacaaaatgaacGTTCTGCGAGAGTTGTGAACGAAAATATGGATTTACATGCCTCAAATTTCGcaacaaattttcaaaactcGCTTCAAGATGctgaaaaaatggaagaagaggCGCATTACGGCGATATAGTTTTACCTACAAAGTGTCATGAAAATGATCTGGTCAATGATTTAGTAGATTCCATCATTTATGCGACTGTGTTTAACGATGAGATGCCCGAGCTACATAAAGAAAAACTTCGTTGCACGTTTTGTGAAGAAGAAATCTATTCATCGCAAATTCTGTTGAATCAACATTTGAAAGAGTTGCATTCGGATAagattttcatttgcaaccCGTGCGATAGAGTATTTGTGGATGAAGAAACGTATATTATTCATGAAAAATACCATTCTTTGGACCGATGTTGCTTCTGTACGATATGTGAAAAGGGATTTGAAATTCCTAGATCTTTAAGAGAGCATCTAGCAATAAACCATATTTCACGGGAACATTCCTGCATCTGTCCATCTTGTGGCTTGAAATTGGATGACTACACTAAGCTTGAGAATCATATAAAGAGCCACGAGGAGGTTAAATCATTTTACTGCAGCTTATGCCCGCTACGGTTTAATAAAGAAGTGAGATTGAAGGAGCATTTAAAGAGGcacgaaaacgaagaaaatttCCCATGCGAAGTATGTGGGCAGCGCTTATCTACAAAACGAAACTTGAAAAATCACCAGCGTTTGAAGCATACAGTGCGCACCGGTGAGAAGCCCTTCGGTTGTGATGTTTGTGGAAAGAGATTCGATtcaaaacaaagaagcaaaaaacacatGATAACGCATACCGGAGAGAGACCACATGCTTGCATGTTCTGCGATCGACGTTATGGTGATGTTGGAGATTTGAAGAGCCATTTGCGAAAACATCTCGGAGACAATATCTACCAGTGCGATCGATGTGATGCGTCGTTTCGTTTAAAAAAAGAGCTGAAACGACACTACGCGGTCCATTTCCAAGgtagtgatgctgatgcccCTGCTTCAGAGGGGAAACCTGATTTCCGTTTTACTTTAGAGTACCTTGTAAATTTGCGTCGCCAAAAAGAGCTAGCTAAATTGAATGCCGAAGAAAATCATTCATCGGttgaaACAGAGCTAAACAAGATGCTCAAGAAATTCTGCCGTATCTGCTTAACGGCGACGGGTGTGGAGTACAGCATGGACGAAGCCATCGACAGCAAAACTTCGTTGTATAGCGTGGTTTGCAAACTGTGTCCTGAAGCATTCCCCGACAAGAGCAGTGAATGGTCAAGGCTGGTCTGCCAACAATGCAGGAAACGAATCTTAAATGCTCAAGAGCTATACGATCTTTGTAAGTTAAGCATTGAATGTTTCGAGGAGCTCTATCCCAAGGAAAAGTGCAGAACACCGAGTTTAAGCGAGAATTTCGTCGAAGAGGAACAACGTCCTGACATGAACGATATAGACGTTCTAGAAGAAGACGCCGAGATCGTAAGATCATTCCTCGGATTGAACAGGATTATGAATGATGCTTCTAACAACGAATTGTGCGTTTCTTCCAAGAATGAGGAAACACATTCTTCCAAGAATGAGTGCGTATTATCCATGAGGGAAGATACAATTGCGTTAGATCAATCCCATGATCAAGACGAGTTGTTCGATTCATGCATCTCAGAAGAACAGAACGAAACACAACACGATCGTGCTGGTATAGTTATGAACGAAAGTGCGGAGTTACAGGCCACAAACTACGCTCCAGATTACCAGAACTCACCTCAATATTCTGTAATAATGGAAGAAGATGAGCATTACGACGATATAGTTTTACCTGCAAAAAGCCATGAAAATGACACGTTCAATGATTTAGTAGATTCCATTATCTATGCGACTGTGTTTAACGATGAAATACCTGAATTgcaccgaaagaagaagcatcGTTGCCCGTTTTGTGAAGAAGAAATCTATTCATCGCAAATTCTGTTGAATCAACACTTGAAAGAGTTGCATTCGgataaaattttcatttgcaaccCGTGCGATAGTGTATTTGTGGATGAAGAAACGTACAACGTTCATGAGAAATACCATTCTTTGGATCGGTGTTGCTTCTGTACGATCTGTGAAAAGGGATTTGAGATACCAAAATCATTAAGAAAACATATAGCTTCACATGAGCATTCCTGCATCTGTCCATCTTGTGGGGTAAAAATGGATGATTATAACAAGCTTGAGAGCCATATAAAGAGCCATGAGAAAGTTAAACCATTTGCCTGCAGCTTATGTCCGCTACGGTTTCATTTTAAAGGTAATTTAAATGCCCATTTAAAAAGGCACCAAAATATAAGAAATTTTCCATGTGATGTATGTGGAAAACGCCTTTCTTCAAAGCGTAATCTGGACACTCATCAGCGCACGGTGCACATGGGTGAGAAACCTTTTCGGTGCGAAATTTGCGACATGAGAGTTGGTACCAAAATGCAATTGTCTAAACACATGATAACGCATACCGGAGAAAGACCTCATGGGTGTATGTTCTGCGATCGACGATATGGTGCTCTAAACGATTTGAAGGACCACTTACGGAAACATCTCGGCGACAATATCTACCagtgcgatcggtgcgatgccTCTTTTCGGTTGATTAGGGAACTTAGGGAACATTACGCGGTCCATTTCCAAGATGGTGCGGAGAGTACTGCGTTGAACTCATCAGATTTCCGCTTTACTCTAGAGTACATAGTGAATCTGCGTCGCCAGAAAGAGCTATCCAAATTGTATGTTGAAGAGAATAATTATTCCGATCAATTTTCCGTTGAGCAGCCGGTTATAGTCGTATGGGAGAAAATGGATGCTTCGTATTGCCGCATTTGCCTAGAGCATGGTGGAGCTTACTATAGCATAcatgaaatcattaaaaagcCGTCCACGACGCTGCGTACGGTTCTCTGCAGATTATATCCTGCGGCATTTGTGAGCAAACACAGCAATCGCTGGCCAACAAAAGTGTGCAAATCTTGTAGAAAGCGGATAATAGACTCGCAAAAGCTATATGAGCTATGTATGAAAAGTGCCGAGCTGCTAGAAAAACAAGCTacagaaggaaagaaaggttACGGAAAGAGAGATAGTTGCGATTTGGCCGCTCCTGAGCAACTTAGAAATACAACTGTGGAACTAGACGATGAAATTGATTCTGACTTTTTTGCTCCGTCGGAAGATTCTGAATCAGAAACACCAAAGCAACGTGATTTAGACGATCCATCGAAGGATAATAGAACGATAGCTCTGTCCTTGGAAGTGATAGACACGGATGATGAATCCTTCGCCAGTATTGACTCCGATTGCCTTTTAGGTACAGAGGAACAGCAACCAAAAAGCGGTACTATGGATGCATGCAACATCGTCGAATTGGATAAGGCAACGGACACATGCGACAACGGTATTGCGTTAGGCACCATTATGACGGATGGGACCACGGGTACAGAAGGCGTTAATGCACACACGTCTGCAGATACCGATTTTTCAGCTGAGGAATCGGAAGACGAAACAGCGAAAATATTTGCCACAAAGGTGTATCATTGTAAAAAGTGTCAAAGAgcatttttcgaaaaaattaCATACAAAAAACATCTTAAATATCATgagatgaaacgaaacaacttTTGCACACTCTGCGAAAAAGGTTTCACATTTAAATCACTTCTGAACGAGCATCTGGAAAAGCATGACAATTCGCGGCTATGTATGATTTGCGGAGAAATGTCCGATAcggcaaagcaaaacaagcgGCATTACGAAAATCATATGAGGGTTCGAAAGTATGCCTGTCCGAAATGTCCACTGCGATTCTACACGTCGCTGATGCTATCTTCCCATGTCAAAACGCATTCCGGTTCCAGATTATTCTGCTGCGATATCTGTGGCCAGCGTCTAAGTTCTAAGAAATGTCTTACGAACCACAAAACGTCTAAACACAGTGATGTGAGACGGTTTAGTTGCGATATTTGCGGCCTAAGGTTCGCTGTCAAGGAAGCCATCAAAAAGCACATGATAACGCATACCGGCGAAAGACCACATGGTTGCATGTTTTGTGATCGGCGTTATGGTTCTGTGGGAGACTTGAAAGACCATTTACGGAAACATATAGGGGACAACATATACCAATGCGACCGATGTGATGTCTCTTTTCGATTGATAGCTGAATTGCGGGAACACTACGCGGTACATTTcaatgatgatgcagatgcagcTAGCTCTTATCCGCCAAACTTTCGCTTAACTCTTAACAACATAGTAAGTTTGCGATATCAAAAAGAATTATCAGAATCGTCGGCCGacaaaagtaaataa
Protein Sequence
MDDYNKLRIHMKIHEKVKPFACNLCPSRFHTQANLKAHLKRHENGRNFPCEVCGKRLSTNSNLKNHQRMVHMGEKNFRCQICGMRIGTKRQMAQHMITHTGERPHGCMFCDRRYGALNDLKDHLRKHLGDNIYQCDRCDASFRLIRNLGTLRVRVFNDEIPELHRKKKHRCPFCEEEIYSSQILLNQHLKELHSDKIFICNPCDRVFVDEETYNVHEKYHSLDRCCFCTICEKGFGNPRCLIDHIKSHEYSCVCPSCGVKMDDYNKLRIHMKIHEKVKPFACNLCPSRFHTQANLKAHLKRHENGRNFPCEVCGKRLSTNSNLKNHQRMVHMGEKNFRCQICGMRIGTKRQMAQHMITHTGERPHGCMFCDRRYGALNDLKDHLRKHLGDNIYQCDRCDASFRLIRELREHYAVHFQDGAEITALNSSDFRFTLEYIVNLRRQKELSKLHVDENHSVVELNNMLEKFCRICLTATGVEYSMDEAIDSKTSLYSVVCKLCPEAFPDKSSEWSRLVCQQCRQSILNAQELYDLCKLSIECFEELYSKEKCRTPSLSENFAEEEQCESRPDMNDIDVLEEDAEIVRSFLGLNKDINDAPNTDFSTEETLSSKPSWMVSTSGDQFSVDSSHDQDEFLDSCVSDEQKTQNERSARVVNENMDLHASNFATNFQNSLQDAEKMEEEAHYGDIVLPTKCHENDLVNDLVDSIIYATVFNDEMPELHKEKLRCTFCEEEIYSSQILLNQHLKELHSDKIFICNPCDRVFVDEETYIIHEKYHSLDRCCFCTICEKGFEIPRSLREHLAINHISREHSCICPSCGLKLDDYTKLENHIKSHEEVKSFYCSLCPLRFNKEVRLKEHLKRHENEENFPCEVCGQRLSTKRNLKNHQRLKHTVRTGEKPFGCDVCGKRFDSKQRSKKHMITHTGERPHACMFCDRRYGDVGDLKSHLRKHLGDNIYQCDRCDASFRLKKELKRHYAVHFQGSDADAPASEGKPDFRFTLEYLVNLRRQKELAKLNAEENHSSVETELNKMLKKFCRICLTATGVEYSMDEAIDSKTSLYSVVCKLCPEAFPDKSSEWSRLVCQQCRKRILNAQELYDLCKLSIECFEELYPKEKCRTPSLSENFVEEEQRPDMNDIDVLEEDAEIVRSFLGLNRIMNDASNNELCVSSKNEETHSSKNECVLSMREDTIALDQSHDQDELFDSCISEEQNETQHDRAGIVMNESAELQATNYAPDYQNSPQYSVIMEEDEHYDDIVLPAKSHENDTFNDLVDSIIYATVFNDEIPELHRKKKHRCPFCEEEIYSSQILLNQHLKELHSDKIFICNPCDSVFVDEETYNVHEKYHSLDRCCFCTICEKGFEIPKSLRKHIASHEHSCICPSCGVKMDDYNKLESHIKSHEKVKPFACSLCPLRFHFKGNLNAHLKRHQNIRNFPCDVCGKRLSSKRNLDTHQRTVHMGEKPFRCEICDMRVGTKMQLSKHMITHTGERPHGCMFCDRRYGALNDLKDHLRKHLGDNIYQCDRCDASFRLIRELREHYAVHFQDGAESTALNSSDFRFTLEYIVNLRRQKELSKLYVEENNYSDQFSVEQPVIVVWEKMDASYCRICLEHGGAYYSIHEIIKKPSTTLRTVLCRLYPAAFVSKHSNRWPTKVCKSCRKRIIDSQKLYELCMKSAELLEKQATEGKKGYGKRDSCDLAAPEQLRNTTVELDDEIDSDFFAPSEDSESETPKQRDLDDPSKDNRTIALSLEVIDTDDESFASIDSDCLLGTEEQQPKSGTMDACNIVELDKATDTCDNGIALGTIMTDGTTGTEGVNAHTSADTDFSAEESEDETAKIFATKVYHCKKCQRAFFEKITYKKHLKYHEMKRNNFCTLCEKGFTFKSLLNEHLEKHDNSRLCMICGEMSDTAKQNKRHYENHMRVRKYACPKCPLRFYTSLMLSSHVKTHSGSRLFCCDICGQRLSSKKCLTNHKTSKHSDVRRFSCDICGLRFAVKEAIKKHMITHTGERPHGCMFCDRRYGSVGDLKDHLRKHIGDNIYQCDRCDVSFRLIAELREHYAVHFNDDADAASSYPPNFRLTLNNIVSLRYQKELSESSADKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-