Aali002440.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- bab1
- Assembly
- GCA_013758885.1
- Location
- NC:41563578-41688230[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-17 2e-14 52.4 0.0 1 43 657 700 657 702 0.95
Sequence Information
- Coding Sequence
- ATGCCATCGGAtacgccaccgccagcagcaacaacggtgccGCATCCGTCACCATCCGCTGgacacgaccagcaccaccatcagcaccatcagcagcaccagcaacagcagcaacagcaacgccaggAAGCCGGTACACCCGGCCACACGGAAGGCGCAGGGTCAGCACACCACAACTCGCCcagctcgtcgtcctcctcatccagctcgtcctcatcgagttcgtcttcctcgtcctcgctgtCATCGCTCTCCCTGAAACGGTCGCTTCTGCCAACGAcgatcgaccaccaccagcagcagcagcattcgagcGTGAAAGCATCACCTCCCTCGTCACCACTCGCGATGGAGCATCATCTTGGCAGCAAATCGGCCGCCAGTAGTCCAATCCCGCCGCTGGCCAGCAACAGTGGCCGACCACAGTCCCGCacggcacacgcacaggcgGCACACTTGAGCCCGGGTGCCGATCATGTCGCCGGCGGTGCCAGCTCACcgactggcggtggcggaggtggaggtggcagcagcggtggtgtcggtggcggtggtggccaacagTTCTGCCTGCGCTGGAACAACTACCAGACGAACCTGACGAGCGtgttcgatcagctgctgcagagcgAATCGTTCGTCGACGTGACGCTCGCCTGCGATGGCCAGTCGATGAAGGCGCACAAGATGGTCCTGTCCGCCTGCAGCCCCTACTTCCAGGCCCTCTTCTTCGACAACCCGTGCAAGCACCCGATCGTGATCATGCGGGACGTCAGCTGGTCCGAGCTGAAGGCGATCGTCGAGTTTATGTACAAGGGCGAGATCAACGTGAGCCAGGAGCAGATCGGCCCGCTGCTCAAGGTGGCCGAGATGCTCAAGATACGTGGGCTGGCCGACGTGAACGGTGATGCGGCGGGGCCGGCGGGCGACGCGGGCACCCCGGACAGCCGCTCCGGTAGCCGCGGACCCGCGCTCGATCTCGAGTCGGAAGCGGCGGTACGCGAGGCGAAGCTTCTCAATCCACTGGCGATCGTGCACAGctcgctgcttgcgaatggtggcggtggcggagcaGTAACGAGTGGCGCCGGAAGTGGCTCATCAGGGGCcgcaacatcgtcatcgtcatcgctggcGACCACAGcggcgaccaccacgacgagtGCTGGCAAGAAGCAACGATcgccgcgcgatcgcgactccACCAaagagcaccaccaccggctagACGTTGGCCAGTACGGACCGGGCagtggcaacggtggtggcggtggcggggtGAGGGATTTGTCCCGCGAGTCCCATCTCTCGCCACGCGATCTGAACAGtgtagcggcggcggcagcagcagctgcggcggcggcggctgcagcagccgccgcggcCGAGTGGCCCCTGGGAGCGGCCGGAttggaggcggcggcggcggccgctgccgtcCAAGCGTCCACCCCGAAGAGTGCCCGGAAGCGCCGGTGGCCCTCGGGTGAGCGAAGCAGCATCGGAAGTCCGGCCGATAGTGCACCGGATCCGGCTGGCCACGATGTACCGTCGCCCATTCCGCCCAACGCGTCGGCCGCGATCGCACAAtcgagcggcggtggtggtggtggtggtggtggtggtggtggtggaggggccGGTGGTTCGAGTAACTCACTCGCCTCCTTCCCACTGCCGCCGGCCCTCGATTCGGCCGCCATGTCCGCGATGTCGTCGCTTTCCTCCTCGATCACCAACCATCCGGACGATATGGAGATCAAGCCGGGCATTGCCGAGATGATTCGCGAGGAAGAAAGGGCTAAGCTACTGGAAAACTCTCAGGCATGGCTCGGTGCATCGACATCATCCATCGCTGCGGCAGAAAGTTACCAATACCAGCTGCAGTCGATGTGGCAAAAGTGCTGGAACAGCCAGAACCTCATCCATCATCTGCGCTTTCGCGAACGGGGTCCACTGAAGTCGTGGCGCCCGGAAACGATGGCCGAAGCCATCTTCAGCGTGCTGAAGGAGGGCCTCTCGCTGTCGCAAGCCGCCCGTAAGTACGACATCCCGTACCCGACGTTCGTGCTGTACGCGAACCGCGTCCACAACATGCTCGGACCGTCGATCGACGGCGGGACGGATCTGCGGCCGAAGGGACGCGGCCGGCCGCAGCGCATCCTACTCGGCATCTGGCCGGACGATCACATTAAGGGCGTCATCAAGAGTGTCGTCTTCCGCGATGCCAAAGAAATGAAGGAGGAACCGCTGATGTACGGAAGACACTCTTAA
- Protein Sequence
- MPSDTPPPAATTVPHPSPSAGHDQHHHQHHQQHQQQQQQQRQEAGTPGHTEGAGSAHHNSPSSSSSSSSSSSSSSSSSSSLSSLSLKRSLLPTTIDHHQQQQHSSVKASPPSSPLAMEHHLGSKSAASSPIPPLASNSGRPQSRTAHAQAAHLSPGADHVAGGASSPTGGGGGGGGSSGGVGGGGGQQFCLRWNNYQTNLTSVFDQLLQSESFVDVTLACDGQSMKAHKMVLSACSPYFQALFFDNPCKHPIVIMRDVSWSELKAIVEFMYKGEINVSQEQIGPLLKVAEMLKIRGLADVNGDAAGPAGDAGTPDSRSGSRGPALDLESEAAVREAKLLNPLAIVHSSLLANGGGGGAVTSGAGSGSSGAATSSSSSLATTAATTTTSAGKKQRSPRDRDSTKEHHHRLDVGQYGPGSGNGGGGGGVRDLSRESHLSPRDLNSVAAAAAAAAAAAAAAAAAAEWPLGAAGLEAAAAAAAVQASTPKSARKRRWPSGERSSIGSPADSAPDPAGHDVPSPIPPNASAAIAQSSGGGGGGGGGGGGGGAGGSSNSLASFPLPPALDSAAMSAMSSLSSSITNHPDDMEIKPGIAEMIREEERAKLLENSQAWLGASTSSIAAAESYQYQLQSMWQKCWNSQNLIHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGTDLRPKGRGRPQRILLGIWPDDHIKGVIKSVVFRDAKEMKEEPLMYGRHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092238;
- 90% Identity
- iTF_00092238;
- 80% Identity
- iTF_00092238;