Aali003379.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- -
- Assembly
- GCA_013758885.1
- Location
- NC:55104444-55105965[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.1e-14 9.8e-11 40.5 0.1 2 37 257 293 256 296 0.91 2 3 0.00051 0.81 8.8 0.0 23 39 325 341 311 345 0.88 3 3 6.1e-08 9.8e-05 21.3 0.0 4 36 366 398 363 401 0.90
Sequence Information
- Coding Sequence
- ATGCGCGCTATGGAGCTACCGACATTATCGGCGGCCTCTGGTATGGTTTCTGGTGTCGTGTGGATGAACCACCAGGATCATATCCTGCAAACGTACCGAGCGATCTACGAAAACGGCGAGTACACCGATTGCATCCTGATGCTAGCGGATGGTGTGCTGCACGCTAGCAGCACCGTGCTCAGCATGGCCTCTACGTTCCTGGAACGTATCTTTGCCGGCGCTAGTCTAGCGGCCAGTACCGGACAGTACACTGTTTCGATTCCGGACGTGACCGTCGAAGGTATGCAGCAGGTCCTACTGTTTATACACACCGGAGAGGTGAATCTACAGCCATGCCAGTTGTCCAGCTTCGTGGAAGCAtgctcgctgctcgagctgcggGGCATCAAAGGCTCGGATGGTAGTATGATGGGGTTGGCAATCAGTGGTTCAAACATCGTACTAGCGAATCAGGTGTTCAACGAGCCACCCATACGAGACACTAAGTCCACTGACGAATCGCAGTGCTTGAACGAACTTTGGTTTCAGGATGCTACGAGCGAAACCGAGCTAGACTCCGACCCGCCAGACCCAGTTCCGACCCTGCACGATGTAACAAGTGCCGATGAAACACGAAAAATTGAGATTGAATTGAGTGCAGTCGGAACActggaaaacatttccaacTATGATTCGCTGATAGCACAAGAAAGTCATCTCATTGAGGTGGAAGAATCTTCTACGGACGGCAAGAGCGCCTCTCCCCATAAACTGAACAGGTCCGGATACGATGAACGACTCGAAGCGGCCATCGAAGCCATCGTGAACGAAAAGCTCACCTATCGCCAGGCGGCGGAGGCCTACAACATACCAAAGACTGCCCTGTGGCGCCGTGCGTTCCGGATCCTACGGACTCCGAAGCCATTCCAACCATCCGCGACTCGACTGCAAGCCATGGAAGCGATCAAAGCGGGAACCAAGCTTCTCAGCATTAGCCGCCAGTTCGACATTCCGCTGTCCACGTTGCATCGTGACAAGCAGCGGCTGTACAACAACGGGTTGCTGCCTGCGTCGGTCACCGTACGGCAACGCAAGGACCGATCAGATGAGGATCGGCGACTACTCGAGGCGGCCCAGCATTCGCTGAACggtactctctctctgcggcAAGCATCGCAGACTTACTCACTGCCTAGGACTAGGATCTGGCGCAAGGTGCAAGCGTTGAAGGATCCGGCTGCCGCCGAAGAAGCCGAACAACAGTCGAGGAAAACGATGCCAAACAGAAAGGTTAAGCATAAGCGACCCAAAACGTAG
- Protein Sequence
- MRAMELPTLSAASGMVSGVVWMNHQDHILQTYRAIYENGEYTDCILMLADGVLHASSTVLSMASTFLERIFAGASLAASTGQYTVSIPDVTVEGMQQVLLFIHTGEVNLQPCQLSSFVEACSLLELRGIKGSDGSMMGLAISGSNIVLANQVFNEPPIRDTKSTDESQCLNELWFQDATSETELDSDPPDPVPTLHDVTSADETRKIEIELSAVGTLENISNYDSLIAQESHLIEVEESSTDGKSASPHKLNRSGYDERLEAAIEAIVNEKLTYRQAAEAYNIPKTALWRRAFRILRTPKPFQPSATRLQAMEAIKAGTKLLSISRQFDIPLSTLHRDKQRLYNNGLLPASVTVRQRKDRSDEDRRLLEAAQHSLNGTLSLRQASQTYSLPRTRIWRKVQALKDPAAAEEAEQQSRKTMPNRKVKHKRPKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00092274;
- 90% Identity
- iTF_00092274;
- 80% Identity
- iTF_00092274;