Basic Information

Gene Symbol
onecut
Assembly
GCA_013758885.1
Location
NC:7464576-7472824[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-37 8.3e-34 114.8 0.2 3 78 543 618 541 619 0.97

Sequence Information

Coding Sequence
ATGGAGCAATGCAATAACGATCGTCCTTGTGTTATCAGTAGTGGAAACTTTTTTCCCCAGAACTCCAAgtcgaaacagcagcagcagcagcagcagcagcagctgcagcaacagcaacagcagctgcaacagcagcagcagcagcagcagcaacacacgcaGGCAATCAATAAGCATCTAACGCAAAAGGATGACAGTCACTTGCACAGCCCGCACCACCAGGACCACGGATCGCTCGGCGAGATCGAGGTGattctggtgcagcagcacaaacaggACGCGCTGTCGGTGATCATCCATCCGCAGGagagcagcatgcagcagctgAACATGTGCCTGGGCAGCCAGAACCCGGGCTCGGTCGACTCCATGATGTCGTCCGACTTTCAGACGCTGTCACCGATGCACGATCGCGATTCGCCGGTCAgcctcagcaccagcacgtcGTACGCGACGCTGACGCCCCTGCAACCGCTGCCCCCCATCTCGACGATGTCGGACAAGTTCGCCTACTCGCTCGGTGGCAACATCTGCGAGGCGTTCCCCGGCATCAACAGTGGCTCGGTCGGCGTCAACATCGAGATCAACTCGTGCTACAACCTGGAGAAGCTGGGCGTCATTCACTCGCCGGTTCACCTGAACGCGGTACAGGAACTGTCACCGACCGGGGcgggcagtggcggtggcgttggtagcggtgacggtgacgtgGTGCACCAGGACCACCCGCACCTACAGCACGCACCGGACAAAGgagtgtcagcagcagcagcagcggcggcggcggcagcaggcagccatGTAGTGCTGAAAGACGTCAAGCTGCCGGACCATCTCGTCGTGGTCGACaagcacgatgacgacgatcggaAACACGAGTGCATTCTAGTTCGTGCCTCGCCGCTGCCCCCGAGCCTGGGCACGGTGGACGACCGATTTCTCAGCTCGGCCGCCAGCGGCAAGCcggagcagctggtggtggtgcggcacCCAAAGGACGACAGCGACCAGTACGCCGGTACGTCCGTGCAGTACCTGGATGGCCAGCAgccgaacggtggcagtggcggcggcggtagcggCGAGGTGATGCTGCATGgtggcggcaccggcagcaacggcactgggcccggtggcggcggcggtggtggtggtggtggtggtggaggcggtggcaGTACTGGTGATGACAGTGGCGGAGGAGGCAGTGGAGGCggcagtgctggtggtagtggcacCGGTCAGAaggatcaccatcagcaccatcatcagcagcagcagcagcagcagcagcaccatcatcaccagcagcagcagcagcagcaccagcaccagcatcaccatgtATTTCTTAGCAAGTCTTTCAGTTCAAAATCAAACATAAGCGACCTTAATCTGTGCAAAGACATTGTTATGGATGACGTGTACGATGACGCCGAGCTCGAGCACGTGAagatggaggagaagaagctaGAGGAATCTTGCAATCAGCAGCTGACCAATGGTGGAACCGGAGCCAGGGGCGTGGGCATCGGTGTAGGgagcggcagcggtggtggtggtggcggtggcagtaaaGGCGGATGTGGGACGCTCGGGGACGTCGGCTGTATAAACGGGGACATCGAGGAGATCAACACCAAGGAGCTGGCGCACCGGATCAGTTCCGAGCTGAAGCGGTACAGCATCCCGCAGGCCATCTTCGCGCAGCGGGTGCTGTGCCGGTCGCAGGGTACGCTCTCCGATCTGCTCCGGAACCCGAAACCCTGGTCGAAGCTAAAGTCGGGCCGCGAAACCTTTCGCCGGATGTACAAATGGATACAGGAGCCGGAATATCAGCGAATGTCGGCCCTCAGGCTCGCAGCAGTAGATGCGAATCCGAATGCTCCAGCGGCTAGTGCTCTGAACTCTACTCAATCGGCGAAACCAGTTAACTCTAAGAAGCCCGAGGAACCGGAAACTCACGTCATGATGGGTCACACAAAGAAGCCTCGGCTAGTGTTTACAGATCTGCAGAGAAGGACCCTACAGGCAATTTTCAAAGAAACTAAGCGGCCTTCCAAGGAAATGCAAGTTACTATCGCACGTCAGCTAGGACTGGAGCCAACGACGGTCGGTAACTTCTTCATGAATGCGCGGCGACGCTCGATGGACAAATGGAAGGACGAGTCCTCGATGAAGGGCCGAAGCAGTAGTGAAAACGCTATACTAGAGCACCTGAAGGACGATTCGTCCGACGAGAATCTGGGCTACGATAGTGCGTTCGGCTCTGGCGAGGGCCCGCTTGAGCACAACTATCAGCAGCACGTTCTCAACTAA
Protein Sequence
MEQCNNDRPCVISSGNFFPQNSKSKQQQQQQQQQLQQQQQQLQQQQQQQQQHTQAINKHLTQKDDSHLHSPHHQDHGSLGEIEVILVQQHKQDALSVIIHPQESSMQQLNMCLGSQNPGSVDSMMSSDFQTLSPMHDRDSPVSLSTSTSYATLTPLQPLPPISTMSDKFAYSLGGNICEAFPGINSGSVGVNIEINSCYNLEKLGVIHSPVHLNAVQELSPTGAGSGGGVGSGDGDVVHQDHPHLQHAPDKGVSAAAAAAAAAAGSHVVLKDVKLPDHLVVVDKHDDDDRKHECILVRASPLPPSLGTVDDRFLSSAASGKPEQLVVVRHPKDDSDQYAGTSVQYLDGQQPNGGSGGGGSGEVMLHGGGTGSNGTGPGGGGGGGGGGGGGGGSTGDDSGGGGSGGGSAGGSGTGQKDHHQHHHQQQQQQQQHHHHQQQQQQHQHQHHHVFLSKSFSSKSNISDLNLCKDIVMDDVYDDAELEHVKMEEKKLEESCNQQLTNGGTGARGVGIGVGSGSGGGGGGGSKGGCGTLGDVGCINGDIEEINTKELAHRISSELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMYKWIQEPEYQRMSALRLAAVDANPNAPAASALNSTQSAKPVNSKKPEEPETHVMMGHTKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDESSMKGRSSSENAILEHLKDDSSDENLGYDSAFGSGEGPLEHNYQQHVLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00098263;
90% Identity
iTF_00092080;
80% Identity
iTF_00092080;