Aali001104.1
Basic Information
- Insect
- Anopheles albimanus
- Gene Symbol
- retn
- Assembly
- GCA_013758885.1
- Location
- NC:51368481-51461988[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-25 2.7e-22 78.3 0.0 2 89 344 429 343 429 0.96 2 2 5.1 8.2e+03 -3.4 0.1 15 38 499 528 489 528 0.56
Sequence Information
- Coding Sequence
- ATGGCGCTGTATGCGGCCATGGGCGGTGATCagcccaccaacaccaccgccaccaccaccaccatggccaccgATTGTCGCGATACGGACTCCGATCTTGGTGATGATTCTCCGCGGTCAAACGACACGGCGGACGAGCACGACGAGTCGGATCACGAGACGGATCACGGCCCAGCGGACGGTGAGTCGAGCGACGAAGGCGTGAATGTAAATCGAGCTgccggaccaccaccaccaccgccgccaccactaacgccacagacgacgacgacgacaagcgcCGGTCGAGCGAAGATGACATCCGGCATGGAGTTTCGCAGAAGTCCGCCAGACCATCACTCGGAGCTCAGCCAAGCGACacaggcggcggcggcagcagcagcgctcggCCACAACCATCCACTCGGCGTGCTGAGCAATCTGACCGCGCTGAACATGAACATGCCCGGGTTGAGCGGGTTGGCGTCTGGTTTGGCGGCGTCCGGGCTGCACCACGGTGCAGATGTGCTGGAGAAGCTCAAGATGCAGGTGCGCGACATGAAGGTCGGGGCGCTGATGAGCGAGCAAATGGCGGCCGATTTCGCGGCCAGTCTGCACGCCTCGTCACCGTTCGGGGCGGCCGCCCTGGCCGCCAGCCAGGCCGGGGTCGGCAATGGGCTCGCCATGTTTGGTGTCGGCCGCGAGATGGACGGTGGAGGACGTGGTGCCGGTCCCGCCGGATCGCTGGGGGTGAGTGGTGGTGCGCCCGGAGGAACGTCGgccgcgacgacgaccggaTCGGGCCGCGAAAGCCGCGACACGACCGGTAGCCAGAATGggaccggcaacagcaacaacagtggcagcgggagcagcaacaacttcTCGTTCACCCTACCGAACGCACCGATCAGCAAGGATGGCAATCCCGGTTCCAATTCGTCAACCTCGAGCGAAACGTCGAACTCGTCGCAGCAAAACAACGGCTGGAGCTTCGAGGAGCAGTTCAAACAAGTACGCCAGCTGTACGAAATCAACGATGACCCGAAGCGGAAGGAATTCCTGGACGATCTGTTCCTGTTCATGCAGAAGCGCGGAACACCGATCAATCGTCTACCGATCATGGCCAAATCGGTGCTGGATTTGTACGAGCTCTATAACCTGGTGATCGCGCGCGGTGGCCTCGTCGACGTGATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGCTGCATCTACCGTCGAGCATCACTAGCGCTGCCTTCACCCTGCGAACACAGTACATGAAGTATCTCTATCCGTACGAgtgcgagaagaagaacctgAGCACCCCGGCGGAACTGCAGGCAGCGATCGATGGTAATCGGCGCGAGGGTCGACGCTCCAGCTACGGCCAGTTTGATTCGCCCTCGGTACAGCGGTCGCCGATACCGCAAGGGATGTCACAGATACCGCCAATGTCGCTGGTATCGCACgtgaatcagcagcagcagcagcagcaccatcaccatcatcaccggctaCTGCCGCCGGTTGGCCAGATTCCGAACATTTTGCCCGCCGAGTTCGAGCAGCGCATGCTCGACTACATCAAGCTGTTCCAGCCGAAAGAGATGACCCGGGCGCAAAGCCCGGACGGCAACAAGCTGTCGGCACTGAACGCACTCGAAATCTCGCGCGTCGCCCTCTGGAACATGTACAATCCGAGCCCGAACAGCCCACCGAACTCGCTCAACACGAGCCCCGAGAACAACATGCAAAGCGCGCTTGATCTGTCGGAATCACCAGACCACGCGATGCCATCGATTAAGCGCGAGCGCACCGAGCATCCGGTCGACTTCAGTGCCGATCCGCGGGACTTTAGTGCTGGccatccaccaccggccaaacgaagccaccagcaacagcagcagcatcagcagcaacagccgcagcatcaccatcaccaccatcaccacagccacagccgaTCGCTGACGCCACTGAAGCTGAACAGCTCGTCgcacgacgaggacgagctcCGATCGGTCACCGGGACGCCGATCAATCTGCGCGAAAatggtaccaccaccaccacgtccAGCCTGCACCACCACGAGGATgcggatgaggacgaggacgaggaggaggaggaggacgaggaaccGACGGAGGAGGACATTCTACGCGCGTCGCTCGTCGCCAGTCAGCACCATCCGCTAGCGCTCAGTCTCgccgatcatcatcttcagcagcagcatcagcagcagcagcgcgaacggGAACGTGTTCAGCAGCATGTGGCGGCACAGGCCGCTGCCgttcagcagcatctgcaacagcaacagcaacacctgGCCAGCCTCGACCTGAGCGTGCTGGATCGTGAGCGCGTGCGGTGCGGCAGTGCCGACGGCAGTACCGGCAACAAACTGAAGCGCCATCagctgcacgacgacgaacagtcgcagcaggaacaggaacaggagcagcagcaccagcaccagcagcagcagcagcaccaaggtcaccatcacaatcacaaccatcaccaaaggcaacatcagcagcagcagcagtcgtctCGTGCCAGTCGAGCACACCTGGGCCGTGGGAAACACGCGGAAAACGGTGACCGCCTCAGTCTGACGCCCGACAGTGACTTCCACCACAGCACGAAGCACGCTTCATCCGGTGGCAATGTgggtaccggtggccgtgcACTCAACGCCGACCCTTTTAGCTCACCGATGGGCATTACGGGCATGCAGTTTAAGCTGATCAGTCGAGGTGATGCCAGCAAAGGTGACCAGAagctggtggtgacgatggagTTCAACGGAGTGCAGTACGAGGGGGTGCTGTTCGCGAATCCGCTACCACTGTCCACCAACACCGTCTCCGCACCGACGTCGACCCCACCGTCCTCCTCGGTATCGGCAACGTCCGCTTCACCGATCGGTTCGCTAGTATCGCCGGTCAAGACGGTGGCTACCATATCACCATTGGAGGAGCGTACTGATGACcgtgctgcagctactgctgctgccgcttcgtCCTCGTTGACATCGAATGGTCCGACAGCAGCTGCTCCGGCCATCGATCCGGCTCTAACCACGAACGGCGGTGGGGCCAGCAACCTTGATGCATCCCATCCGACCATCGGCAGCGCCACCACTGCTTCCTGCAGCCAGCCACAGCAGGTGGAAAGCGGTGGCCCCACGGTACCGACCGCCGGGATCAGCAGTCCGCTCGTATCGTAA
- Protein Sequence
- MALYAAMGGDQPTNTTATTTTMATDCRDTDSDLGDDSPRSNDTADEHDESDHETDHGPADGESSDEGVNVNRAAGPPPPPPPPLTPQTTTTTSAGRAKMTSGMEFRRSPPDHHSELSQATQAAAAAAALGHNHPLGVLSNLTALNMNMPGLSGLASGLAASGLHHGADVLEKLKMQVRDMKVGALMSEQMAADFAASLHASSPFGAAALAASQAGVGNGLAMFGVGREMDGGGRGAGPAGSLGVSGGAPGGTSAATTTGSGRESRDTTGSQNGTGNSNNSGSGSSNNFSFTLPNAPISKDGNPGSNSSTSSETSNSSQQNNGWSFEEQFKQVRQLYEINDDPKRKEFLDDLFLFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQFDSPSVQRSPIPQGMSQIPPMSLVSHVNQQQQQQHHHHHHRLLPPVGQIPNILPAEFEQRMLDYIKLFQPKEMTRAQSPDGNKLSALNALEISRVALWNMYNPSPNSPPNSLNTSPENNMQSALDLSESPDHAMPSIKRERTEHPVDFSADPRDFSAGHPPPAKRSHQQQQQHQQQQPQHHHHHHHHSHSRSLTPLKLNSSSHDEDELRSVTGTPINLRENGTTTTTSSLHHHEDADEDEDEEEEEDEEPTEEDILRASLVASQHHPLALSLADHHLQQQHQQQQRERERVQQHVAAQAAAVQQHLQQQQQHLASLDLSVLDRERVRCGSADGSTGNKLKRHQLHDDEQSQQEQEQEQQHQHQQQQQHQGHHHNHNHHQRQHQQQQQSSRASRAHLGRGKHAENGDRLSLTPDSDFHHSTKHASSGGNVGTGGRALNADPFSSPMGITGMQFKLISRGDASKGDQKLVVTMEFNGVQYEGVLFANPLPLSTNTVSAPTSTPPSSSVSATSASPIGSLVSPVKTVATISPLEERTDDRAAATAAAASSSLTSNGPTAAAPAIDPALTTNGGGASNLDASHPTIGSATTASCSQPQQVESGGPTVPTAGISSPLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -