Apur035860.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639996.1:44539355-44544031[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.033 7.1 9.1 0.5 3 23 334 355 332 355 0.94 2 9 0.019 4.2 9.9 4.6 2 23 481 503 481 503 0.91 3 9 0.0035 0.74 12.2 1.4 2 23 589 611 588 611 0.95 4 9 0.011 2.3 10.7 0.2 3 23 915 936 915 936 0.96 5 9 0.0068 1.5 11.3 0.2 2 23 988 1010 987 1010 0.93 6 9 0.014 3.1 10.3 3.6 2 23 1049 1071 1048 1071 0.96 7 9 0.14 30 7.2 4.2 2 23 1085 1107 1084 1107 0.92 8 9 0.00023 0.049 15.9 0.7 2 23 1175 1197 1175 1197 0.95 9 9 0.13 29 7.2 1.4 1 23 1298 1320 1298 1320 0.98
Sequence Information
- Coding Sequence
- atgGCCGCGTCTATTTATGCCACCCCACCGCCAGACTTAAGCAGCGAGGACACTGCACTTTCCGATGTCTCTAATGCATCTTCTTCGCTAAATAACCGCAacagcaataacagcaacactaccaacaacaacatcaactgTAATAACACAAcagccagcaacaacaacgcaaCAAAAACTAACCCATtaacaaataagcaaaaacgCACAATCGCTGATGTCCTTACTAGTGGTAGTAATCCAAGCGAAATAGATCAACAGTCACCAAAACTTTGCTCTAGCGCATCACCAAACGCATCTAACGGCGGAAACACTACAAGTGTCGCAATTACAGATGAGGAGGCCATTGATAGTACAATACGAGATGATGGGGTAGTTGACGAAGATGCCGACATGTCAATGACATCACCAGCTGAAGCTGAAAGCGCTACGGCGGTAACAATGGCCGCTGTTGCTGCGGCAGCTAATGCAGCAGCCATGCAGCTGCAATTGTTGGAGGCGATCAACGATGCTGCAAAAAAGCGGCGCAAGCAGAATAACCCCAGCCGAGTGGGAGCACAAGCAGCTGCAGCTGCCGCCGCCGCACTTATAGCTGCGTCAGAATTGCAGCCAAACGATGCCAGTGATGGTGCACTAAACGATACTGCTGCTGAAGCCATAATTGCTGACAAGGAACAAATTGGAACGGGTAGTACACCACCAACAACACTGCCAGTAGATTATGAGGAGAAATTATCGAAAATGTTTTTACCTAAATCTATGGAACAGTTGAAGGAAACATTTGAATTGCTGCAACAAAACCAACAGCAACTTGGAAACATATCACCAGATGCAGAAGTGACACGCGATAAGTCGAATCTTTCGATGCCACACGAAATTATACCAAAAACAGAAGTCAATTTGGATACAGAAGCAGATGCAAATAATCAAGTAAGTGAAGCGAAGACCGCAGAGCAAGAAGATACAGCCGAAGAGTTTAAAAATCCTTATCAGACCTTTTGTAAAACATGTGGCGAGAACTTTGAAACCGAATTTAAGCTTGGATTGCACATGTTGCAAGAACATCAGAATGATATAGATGAACAGGAGAGTGTTAACGGTGGCACAGATGGAGAGCAAAAAAAGCGAGAGCATATATCTTACGACATGCTGTCGTCAGTAAGCGTTAAGGTCGAGCGTCCTGACTACGAGAGCTCTACACCACCGCCTGCTTTAGCTACGCTAAGCAATCAAAACGAGCACGCCACATCAAATCTCCTAACAAATGGAAAGGAACCCTGGTTGAATGCAATGTCTGGTGTGAGATTCCCTTTTCCACCAGAAGCTGCTGCCGCTGCAGCGCTTTCAGCCAGTGGATATTTGCCACTCCTGGGCATGCCCGGTTTTTCCACCGTTGATAGTCTAAATCGTCCGCCGCTGCGCATTTTTAATCCTGAAGCCTATTGTGATCTCTGTAATAAGGAATTCTGCAATAAATACTTCCTCAAGACGCACAAAGCCAATAAACATGGCATTTACGATCCGGCCATTTCGACGAGTGGTGAGAGCGGTAATAGTGGTAGTATAGCTAGTGGCAATATGACTGCCATGACTCAAATGTTGCAACTACAaatgcaacaacagcagcagcaacaacaaaacatgcAACAGtttcaacagcagcaacaattaGCTATGGAAGAGACCCAGCAAAAGCAAATTAGCGCCCAGGCATCTAACGGTGTGCAATCACAGTCGCTCACCCCGCCCGCACCACCACCTGTGTATTGCGATATTTGCTCCAAGCGGTTCACCAATGTCTTCGCTATGCGCCGTCATCGCACCAAATCACACGAGCAGCCGCGCAACAGTCCCATAGGTGAGCAACCGAACCCAACGCTACCACTACAGCAACAGCAGTCACAGTCACAGCCGACGAAAGCAGATGCAGCGGCAGGTACGCAGAATGAAGCGAAGAATGAACTAATCGCAGATGTTGGTGCCAAACAATTTCAAATGCCGGATGGTTTTAGGCAAGACTTTTCACTCGAGCAAGAGGATGTTGCATTCACGCCACAACCGCGCAAACTTTCACTACAATCGCAACAGCAGGCACGTGATGCCAATTTCGCTTACGATAAGCTGCGCCGCCTTGGCGTGCTCAATCCCGAGGCTTTCTGTgaaatttgttgcaaagaaTATTGCAACAAGTACTTCTTACGTACGCACAAATGGAAGCGTCATGGCGTTTTTGTGCCACCAGATGATCTCAAGGATGAGCAACTCCAACCGCAACCGCAGAAGATGTCATCATGGCCTTCCTTAATGGGTTTGCCGGGTATGCCGCTAAACTTGATGATGGCGAATGATAAGACATTTATGGCTCAACGCATGTTTGCTGCCACCACCGCAACCACTTCCACCGCTAATTCAAGCACCATTGATGACTCAGCACCACAACATTTGGCCAAACGTATTAAGCTTGAACAAGTTGACGAGGAAATATCGCGAACAAATGACGAAAATCAAGAGAATAAATGCTCCTCTTCGGCTCGGCAAGCAGATgttcaacagcagcagcaagtaGGTACACAAAACGTCATGTCTACGCCAGATCCAACGCAGAAGATCTTAGCAGAATCCTACAATTCGGGTGCCAATATGTCAACTAGTCCTGAGACTGCAGTGGGTTTACAAAATTTGCAGAAGCTTCAGTCAATGATACAACAACTCAATGACTTGAATGGCAAGCGTCCATTAGGCTGCCATCTCTGCGGGAGAGAAATGGAAAATCAATATGCGCTACAAGCTCACATGATGGCCGAACATGCTGGACTACTGGATGGCAGTAGCACACTACCTCTAAACTTTCAACAACACCTATtccaacagcagcaacagttgcaggcacaacaacaacagcaggcgCTTAAACTCTCGCCGTCGGATTCACCCGGTATATTGCCAACGCTCAATGAAATGCGCTGCAATCAATGCGATCGTGACTTTGCCAATATACAAGAATTCAAACAACATATCGCCGAAGTCCATCTACTACCAGGTAGTCCGCTACGCGAAGGCTTTGTTACACCCGAACGTCCTATTAACCCAAATGCTGCAGTCGGTGGTACACGACCGCCCTTCACTATCACACCGACCAGTAGCTATTGTGAGATTTGCAATAAGGAACtgtgtaataaatatttcatgaagactCACATGCAACGTATGCACGGCATAGAGATCGAGAATGGCGCACAAATCGGTGGTGTTGTTTGCAACATTTGCAACAAAGAGCTCTGCAGTAAATATTTCTTGCGTGTACACAAACATAATACCCACGGTATCGTTGAGGAGGGCGCACCGCTTCCACAACCACGCCAAAACGGACTAAGCTTCGAAgctcaacagcagcagcagcaacagacgcaacaacaacagctaacaACCGCAGAAAACGACTTAAATCGCGGACTAAATTTGAGTCCCTTCGGCAGTGGTAACTCTGGTGACTCGAAATCGGACTACGCCAACTACACAGAAGTCTGTACGATTTGTACACGTCGCTTCCGTAGCGCGAAGTGGCTGCGCAGTCATCTACTAAGCGACCATGGCCCGACAGGTATTGAAAAACTACGCGAACTAGAGCAGCAGTATGGCCCGTTGAGTAAGTCTTCTAGCCCCACGCTCAAAATACCGAATGGCTCAGCAAGTTCGGACTCCAGCGGCGGCAGCACCAATGTGAATAATGCCAATACGACAGCTGGTCTATTACCAAACCCGACCCATCTTGCTCAAGCTTTGCAAAATCTAAATGCACAGCACCTTCTTGGCAACATGCCAAAGAATATGTTACCTGGAATGTTTGGCACAGTAGCCGAGCAAACGCACCAATCGCCGCGATTGCAGGAGTACCAGTGCTCTATGTGCACCTTTACCACACCATACTATGCATTTCTATTCATACACGAACGTTCGCATTCGCTGCTTATTGGCGGGGCTGGTGATCTGAAAGTAGTTCCACAGGAGCAATTGTTGGGCGGCAGTAGCAGCAGGGATGAGGTAAGCGGACGAGATGAGGGTAAAACGAAGGCACAAAACACAAATGCTGCATTAGTATCGGACAAATCTCAAATGCTTCCGCTGTTGCAGCCTAACAATACACCTACAGCAGAAAGTGGACGCGTCCAACCAACTAATTTGTCAACACGCTCCACCACCACGCCGACTGGCAGCTCAAGCAAATCCAAGTCATCCAAAGAAAATCAAGCACAGCGCAGCGTTAAGGAAATTGAGGCTACGGAGAATCACAAGGAGACCGCCGTTAGCAAAACTGAAGTCAATGCAAAAATGGATAAAACGCGCACAATCGCCACATCGCCTATTTTCGCAACCACCCCCAATATGCTGACACCTCAGGATACGCTCAATGAGTTGGCGGAGAAATGCGGCAAGGTGGCTACGTATGCGGTGCCAAAAGACGTCTGCGCGGTTGTTGGAAAGGATGACGGCGAACCGCAAATGCAAGCTTTCATGTTGGAAATGCAACAGCAGTGTGAAATGGATGCAGTGGTGAATGACGCTGGAGATGGTGTAGAGGAGAAATGTAACAGGTTTGTGCCAGCTATAGTTTATTTGCCTGTTAGAAAACGGATCTCAGGGCCAGTAACTGTGTCCTTTAACTTGACACCAGCCTAA
- Protein Sequence
- MAASIYATPPPDLSSEDTALSDVSNASSSLNNRNSNNSNTTNNNINCNNTTASNNNATKTNPLTNKQKRTIADVLTSGSNPSEIDQQSPKLCSSASPNASNGGNTTSVAITDEEAIDSTIRDDGVVDEDADMSMTSPAEAESATAVTMAAVAAAANAAAMQLQLLEAINDAAKKRRKQNNPSRVGAQAAAAAAAALIAASELQPNDASDGALNDTAAEAIIADKEQIGTGSTPPTTLPVDYEEKLSKMFLPKSMEQLKETFELLQQNQQQLGNISPDAEVTRDKSNLSMPHEIIPKTEVNLDTEADANNQVSEAKTAEQEDTAEEFKNPYQTFCKTCGENFETEFKLGLHMLQEHQNDIDEQESVNGGTDGEQKKREHISYDMLSSVSVKVERPDYESSTPPPALATLSNQNEHATSNLLTNGKEPWLNAMSGVRFPFPPEAAAAAALSASGYLPLLGMPGFSTVDSLNRPPLRIFNPEAYCDLCNKEFCNKYFLKTHKANKHGIYDPAISTSGESGNSGSIASGNMTAMTQMLQLQMQQQQQQQQNMQQFQQQQQLAMEETQQKQISAQASNGVQSQSLTPPAPPPVYCDICSKRFTNVFAMRRHRTKSHEQPRNSPIGEQPNPTLPLQQQQSQSQPTKADAAAGTQNEAKNELIADVGAKQFQMPDGFRQDFSLEQEDVAFTPQPRKLSLQSQQQARDANFAYDKLRRLGVLNPEAFCEICCKEYCNKYFLRTHKWKRHGVFVPPDDLKDEQLQPQPQKMSSWPSLMGLPGMPLNLMMANDKTFMAQRMFAATTATTSTANSSTIDDSAPQHLAKRIKLEQVDEEISRTNDENQENKCSSSARQADVQQQQQVGTQNVMSTPDPTQKILAESYNSGANMSTSPETAVGLQNLQKLQSMIQQLNDLNGKRPLGCHLCGREMENQYALQAHMMAEHAGLLDGSSTLPLNFQQHLFQQQQQLQAQQQQQALKLSPSDSPGILPTLNEMRCNQCDRDFANIQEFKQHIAEVHLLPGSPLREGFVTPERPINPNAAVGGTRPPFTITPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVVCNICNKELCSKYFLRVHKHNTHGIVEEGAPLPQPRQNGLSFEAQQQQQQQTQQQQLTTAENDLNRGLNLSPFGSGNSGDSKSDYANYTEVCTICTRRFRSAKWLRSHLLSDHGPTGIEKLRELEQQYGPLSKSSSPTLKIPNGSASSDSSGGSTNVNNANTTAGLLPNPTHLAQALQNLNAQHLLGNMPKNMLPGMFGTVAEQTHQSPRLQEYQCSMCTFTTPYYAFLFIHERSHSLLIGGAGDLKVVPQEQLLGGSSSRDEVSGRDEGKTKAQNTNAALVSDKSQMLPLLQPNNTPTAESGRVQPTNLSTRSTTTPTGSSSKSKSSKENQAQRSVKEIEATENHKETAVSKTEVNAKMDKTRTIATSPIFATTPNMLTPQDTLNELAEKCGKVATYAVPKDVCAVVGKDDGEPQMQAFMLEMQQQCEMDAVVNDAGDGVEEKCNRFVPAIVYLPVRKRISGPVTVSFNLTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -