Apur048792.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639997.1:114257256-114266018[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0011 0.23 13.8 1.3 1 23 144 166 144 166 0.98 2 14 0.0005 0.11 14.9 3.5 2 23 451 472 450 472 0.97 3 14 5.3 1.1e+03 2.2 4.1 1 23 478 501 478 501 0.94 4 14 0.055 12 8.4 2.2 1 23 528 551 528 551 0.96 5 14 0.042 9.1 8.8 2.9 2 23 600 621 599 621 0.96 6 14 0.02 4.4 9.8 3.2 3 23 854 874 853 874 0.96 7 14 0.0088 1.9 10.9 0.7 1 23 880 903 880 903 0.96 8 14 0.029 6.2 9.3 0.3 1 23 976 999 976 999 0.96 9 14 3.9 8.4e+02 2.6 0.3 1 20 1237 1256 1237 1258 0.92 10 14 0.00027 0.057 15.7 6.6 1 23 1304 1326 1304 1326 0.99 11 14 1.5e-06 0.00033 22.8 0.6 1 23 1331 1353 1331 1353 0.99 12 14 0.0011 0.24 13.8 7.9 1 23 1359 1382 1359 1382 0.95 13 14 0.00037 0.078 15.3 0.1 2 19 1388 1407 1388 1411 0.93 14 14 0.00021 0.045 16.1 7.2 1 23 1417 1440 1417 1440 0.98
Sequence Information
- Coding Sequence
- ATGGACGGAGAGGCCGTAATTGAGGAAACGGCGCCAATGGATTACAGGCTCGTTTGTCGAACATGCCTAGTATCGGATGCAGAATTTTACAAACTAGATTCGCCTATATACGTAGATGATGATGATATTGATGAGAAGCCAGTGAGCTTCATGGAATGCCTGCGTTACTGTACACGCTTGGGCGATGGTGGTGAGAGTGAAATGTTGCAATTtccaatttacatatgtacagaatGTAGTGCATCGTTGCAAGTGTCTTACAATTTCATAAGAAATGCACTCGAGGCCCATGAAATATTGCGGCAAAAGCTAGGCGAATGCCATGATTTGAAGGAGAGATCGCCGAAAGCGAAGcgtaaaaatggcaaaaatggcATAGTAGGAGAGGGTGTGGAAGATGGGGTggAAACGGAAGGTTCAAAAATGCGTTTTCGCtgcaaaatttgcaatgaaaaagTCGAAACCaagaaaactttaaaagaaCACGTAAAACTGCATTTAgATATGATTTCGTATTGCTGCCAGCTATGCAGCTTTGAATGTAGGAAACGCACATTGCTCTTTGACCACTATAAGCTGGTCCACAACATGCAACCCACACGCGaacaattaaaaccaaaaacaaaacaaccaagCCAGACGTATATCAAGAAAGAACAAGAACCAGATATAGAGGATCCTATTTCAcaggaaatggaaaaaatacataattctcaaacaaacgaaaattatttgcaaactaTAAAAAATGAAGAACCAGAATCACAACAAGAATTAGATATGCATCTATTTCTAACGCCTGTCAGCAGCAATGCTTCAGCAGCTGCTGCATATGTtgaagcagcagcagcggcaacCGCGGCGGATGTATTTGACGAACCAGTCGCTAGAGCAACCTCGCCTATGAAAGACGAGCACAGGCTAAGCACATCAACTGAATTGCAACAATATGGCACGGATCAGTTCAATATTGCAGCGAATGAATTGAGTGTCGGCAATGAATTTATTGTTATGGCAGACGGTACGGTGGAGGAAGTAATGGGCAATGGAGTTGTAATCGAATATATAAATGCGGCTGATGATGGTGTAACATTAGATAATGGACTGGTCCTAGACAATATAATGCAAGTAGAAAACTCCACAGAAGTCGACGATCAGCCAGTTAACGCTATGGATTTAGATGTAGATGATATAATAATTGAAGAAAGAATGAGTAATGATTTGTCCGTGCCCAGTATGATGGCTATGACAGGAACACAAACTACTGTACAAACGCTACAAAATTTAGAGGATGAAATGCCGCCGCCATCAATTATTACAGCTCACAGTGTGATTCTCTCAAAACGCATTAAGTGCAAGATATGTACCAGTAATTTTCACACGCAAGATCAACTAAAAACCCATATGCTAACACATAACGAAATACCGCATTTCTTTTGTGATCAATGCacgttttatacatttttcaaaatcgatTTAACGCAGCATTACAAAACCAAACACAAACTGCAGCCCACACAAAAGCAATTACAGCCGAAAAACAAGGTGCGACTGAATGAACAGCCTATTGATAAACATATATATGCTTGCGATATGTGTCTATATGAAACGCGTATAAAATCGCACTTGCGCCGCCACTATTTGAGTCAGCATCAAGAGGAGGCGACCGAAGTGCAATTGAGACCTAcaattgATGATTCAGCACCTTTGAATCAATTATCACAAGGTTCACCGCCCGATTCGCCGCCACCAGCGCAACATAGCAAAACATTACGTCCGGACTATCCAAAAGGTTTGAATTGCAAAAAGTGTTCTAAAACTTTCTATTGGCGTGAGAAACTTAAAGATCACTATAGGCAACACAGTTTGGAGGAGGGTAATAGCATAGATAACTCTATCGGGGAAACTTTTATATCAAATGCTGTGGGCAACAACTCAGCAGGCACAAGTTTACTCAAACACAATGCATTGCAATATCACATGCCCACCACGCATGGCGCTAGCAATGTGAATGCTATGCTAAATGCTAACATCAGCCATAACAACAACTACAGTACTAATGGCGAACCGACAGTGATGGACGCACAAGCGATTGTCGATGCTGCAGTAGCGGAGGCGCATGCTGCTGCCTTACAGCTTAACGTCCAATTGAATGCACCAGCGCCGGATATAATTATGGATATACCAGTGGCGGCCACCATTTCCACTACTACGGTACCAATGGAAACGGCAATTGGCAGTGCAAATAACGTCCATGGTCATCAACATCATCAGCAATCGGTTGCTGTAATGGCGGGCTACGCCTGTCCGCAAATACCGTCGGATGCTATACCGCAAGTGGTTGAAACGGACACAACTATAGATAACAATGAATTAGATTTCGTTTTTAACGATGCGCTTTTCGAAGATTTCGAAGAAGATGAAAATGAGGACgaagaaaatgaagaagatGACGGCACAGACTTTCAAGACTTGCTGCTTACAAGTGACGATGATTTCGATGATATATTACAGGACCAACAAAGCGACGCCGCTAATAGTAATAGCTATCAGCCATATTGTGTGCACTGCAATAAGAAATTCTTAAGCCAATATCAATTTGAAAATCATATGTTTGTGCATCGTGGTTTGGCGCCTTATCGCTGCGAAATGTGTACCAATTTGTATAATACAAAACGTGCATTGATTCGGCACTACCGTGCGGTGCATAAGAAAATGCCCTCCAGAGATATGATTCAAGCTAAAGGAGACAAGGCTATCGTGGATCATACACCCATTGAACATTTGGATCTTGTCGAACAAAAAGcggTCACCTTAATGTGCACCAAATGTCCATTTGAGTCGATTGATCGGCACATAATGCAGTTGCATTTGAACACCACACACGGCCTTGTGGATGaaAATTACATCATGCAAAAATTGCCATTCGAATGTCCACGCTGTATACGTTCGTATGCGACGAGAGCGCGTCTCATACGGCATTTGGAACGCAGCCATTCGGTGGCAACTATAATACAACAACAGCGTACGGTAAATAATGCTATGCGTAATCAACTGCAACTACTACAACAGCCACAGTCACAGACACAACATTACCAGCCATATATTGCAATAAAAGACGCAattactgcaacaacaacaacagcagctgcATTATCCGTATCCACATCCTTAGCAGCAGTAACAGAATCATCAGCATCGACGAGCATAAGTTGCGGCCGAGGCataataacgcattcatatcgAATCAACTACAACCACAACagcgacgacgacgacggcgacgacgacgacgacggcggcaacaacaacaaaaacagcagcaATGATGATAATTATGTCAAGGATAATGgcgctggtggtggtggtggtggcgacGACGGCGGATGCATGGACGACAGCACAAACAATGATGCCCCTAATGCAGCCAATGAATTGGCACCCACAACTAAAGCTTCGCCACTATCCAAACTATTTGCAGTGAtggaacatgaaaataaatcgAATACTTGCAATTCAATTGCTCCCACAAAGGCCACAAAGAAAACCGCCACAAGCCAAACCAAGGCGAGTATGGAGCGTGCTAAGAAGCCAGCAAATGCAATCAAAACGAGAACAAGAAGAAATAGTGCAACTAATTCTGTTGGCAATATAATCACTTACAATATTTGCCAACAGCTGAATGAAAATAACGAACTCTTTGATGAATATGCCTGTGGTATGTGTTCGCAAAGTTGGCGCACCGCAGCTGAGCTGCACACGCACGAATGCGTTCGAATTGGTACTGGCAGTGGTAATGGTGATGGTAACGGGGGAGGAGGTGTTAGTAATGCTACCACTGCCACTGAAGCATCAAGTAGTGCCACAGACGTAGTTGGTCTGATAATAACCGAACGCTCACAATATCTTTACAAATGTGAcatttgtaattgtaattacAAATCTAATGAATTACTTAAACATCACATGAAAAGGCATACTGGACGCATATTTCGTTGCAGCATTTGCCCGAAAGCTTACATCAATCGTAGCGAATTGAAATCTCATCAACTTACACATACCGGCGAGAAGCCACACAAATGCAAAATGTGCACAAAACAATTTCGCTATCCGCATCATCTAAAACGGCATTATGATGTCGTACACTTGGGCAAGCGTGCACGTTGTCCCGTCGAAGGTTGTGGACGCTCATTTACAACACAAGCCCAATTGAAGATACACGCCTGGATACATGACGGCAATGAACCGTACAGATGCAAATATTGCAGACATTCGTTCAAGAAACGCGAATCCTTACGAAAGCACACCCGCCGCATACATCAATGCGATCTCACTGAAGAGGAAATCGCTGAGATCTATCGGCAAAATGTTGGTCACACTAATCCCCACGACTTCACTATATCTCTGCGGCGTTCGGATGTTGAACAGGCAGCACAGCGACCCCAAAAACACATCAACGATTTAGCAGCCGAATCTGCAGCAGCAGCCGCAGCTGAGGTAGCTGAGGTAGCAGCTGTCAGCATTGTACAAACGGATATCCAAACTACCAACAAACTCTCACCGCTACTCGCATCGAATAGTCACAACAACATGAATATCGAACTCGAAATGGGAGTCGTAGAAGAAGATGAGACCGTTGTGGCATCTGTATCGCATGTGTCACGGAACAGCACCTCATTATCGACACACGAGGAAacgctacacacatacatgctaCCTGGCATGGAGGAGCATAGCCAGTTGCCACATTTCAAATTGGAAAATTCTGGCTCATTTTGA
- Protein Sequence
- MDGEAVIEETAPMDYRLVCRTCLVSDAEFYKLDSPIYVDDDDIDEKPVSFMECLRYCTRLGDGGESEMLQFPIYICTECSASLQVSYNFIRNALEAHEILRQKLGECHDLKERSPKAKRKNGKNGIVGEGVEDGVETEGSKMRFRCKICNEKVETKKTLKEHVKLHLDMISYCCQLCSFECRKRTLLFDHYKLVHNMQPTREQLKPKTKQPSQTYIKKEQEPDIEDPISQEMEKIHNSQTNENYLQTIKNEEPESQQELDMHLFLTPVSSNASAAAAYVEAAAAATAADVFDEPVARATSPMKDEHRLSTSTELQQYGTDQFNIAANELSVGNEFIVMADGTVEEVMGNGVVIEYINAADDGVTLDNGLVLDNIMQVENSTEVDDQPVNAMDLDVDDIIIEERMSNDLSVPSMMAMTGTQTTVQTLQNLEDEMPPPSIITAHSVILSKRIKCKICTSNFHTQDQLKTHMLTHNEIPHFFCDQCTFYTFFKIDLTQHYKTKHKLQPTQKQLQPKNKVRLNEQPIDKHIYACDMCLYETRIKSHLRRHYLSQHQEEATEVQLRPTIDDSAPLNQLSQGSPPDSPPPAQHSKTLRPDYPKGLNCKKCSKTFYWREKLKDHYRQHSLEEGNSIDNSIGETFISNAVGNNSAGTSLLKHNALQYHMPTTHGASNVNAMLNANISHNNNYSTNGEPTVMDAQAIVDAAVAEAHAAALQLNVQLNAPAPDIIMDIPVAATISTTTVPMETAIGSANNVHGHQHHQQSVAVMAGYACPQIPSDAIPQVVETDTTIDNNELDFVFNDALFEDFEEDENEDEENEEDDGTDFQDLLLTSDDDFDDILQDQQSDAANSNSYQPYCVHCNKKFLSQYQFENHMFVHRGLAPYRCEMCTNLYNTKRALIRHYRAVHKKMPSRDMIQAKGDKAIVDHTPIEHLDLVEQKAVTLMCTKCPFESIDRHIMQLHLNTTHGLVDENYIMQKLPFECPRCIRSYATRARLIRHLERSHSVATIIQQQRTVNNAMRNQLQLLQQPQSQTQHYQPYIAIKDAITATTTTAAALSVSTSLAAVTESSASTSISCGRGIITHSYRINYNHNSDDDDGDDDDDGGNNNKNSSNDDNYVKDNGAGGGGGGDDGGCMDDSTNNDAPNAANELAPTTKASPLSKLFAVMEHENKSNTCNSIAPTKATKKTATSQTKASMERAKKPANAIKTRTRRNSATNSVGNIITYNICQQLNENNELFDEYACGMCSQSWRTAAELHTHECVRIGTGSGNGDGNGGGGVSNATTATEASSSATDVVGLIITERSQYLYKCDICNCNYKSNELLKHHMKRHTGRIFRCSICPKAYINRSELKSHQLTHTGEKPHKCKMCTKQFRYPHHLKRHYDVVHLGKRARCPVEGCGRSFTTQAQLKIHAWIHDGNEPYRCKYCRHSFKKRESLRKHTRRIHQCDLTEEEIAEIYRQNVGHTNPHDFTISLRRSDVEQAAQRPQKHINDLAAESAAAAAAEVAEVAAVSIVQTDIQTTNKLSPLLASNSHNNMNIELEMGVVEEDETVVASVSHVSRNSTSLSTHEETLHTYMLPGMEEHSQLPHFKLENSGSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -