Apur012962.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639993.1:151249159-151258462[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00026 0.056 15.7 0.5 1 23 207 229 207 229 0.95 2 15 0.0017 0.36 13.2 2.3 3 23 237 257 235 257 0.95 3 15 0.00022 0.047 16.0 0.1 1 23 401 423 401 423 0.98 4 15 0.0028 0.59 12.5 0.8 1 23 429 451 429 451 0.98 5 15 5.8e-05 0.012 17.8 3.2 1 23 484 506 484 506 0.98 6 15 0.011 2.3 10.7 0.3 1 23 522 544 522 544 0.94 7 15 0.034 7.3 9.1 0.4 1 23 550 573 550 573 0.96 8 15 0.35 75 5.9 0.3 5 19 584 598 581 599 0.91 9 15 0.0002 0.044 16.1 5.6 1 23 608 630 608 630 0.97 10 15 0.084 18 7.9 1.7 2 23 636 657 635 657 0.96 11 15 1.2e-05 0.0026 20.0 1.0 1 23 665 687 665 687 0.98 12 15 0.006 1.3 11.5 0.2 3 23 695 715 693 715 0.97 13 15 0.00019 0.041 16.2 0.8 1 23 721 743 721 744 0.95 14 15 0.031 6.7 9.2 0.2 1 23 754 776 754 776 0.97 15 15 0.058 13 8.4 0.0 1 20 1318 1337 1318 1340 0.93
Sequence Information
- Coding Sequence
- ATGGACAGGCAAACATTTGAAATTCAATGGATACAAGGCGATCCTGATGACTTGAAAAGTGCTGGTGGTGGTCAATTGATAGTGAAACCACAAGCTCCAACTGAAGAAGAGCTACTTGCCAATGGTGTGGTTGATGCCGGCAATGCTACATATCATCTAGTCTCTGgagacgatgatgatgatgatggcaaTGTCTCAACCGCGGTGGACATCGATCAAATTGCCGCTGAAAATCTAATTTTCATGGCACGCGATGGTCAAATGGTAACAGAGATTATCGGTACCAACACCGCCGACGACAATCGCGCCCTTGTTGTATCAGCGTCTGATAATATTGATTGTGAAGTGGCTTTGCAACAAGCCGCGGCTGCTGTTATGTCTTCCAATGAGCTGGCTCAAGAACAGTCAGATACAGGCGGTGGTTTCGATGATAGCTTTGTCGATAATACACCTCAAATGGTTACCGAAGAGGTGATAACGGATGACTGGGTACAGCATCAAGGCGAGGAGCGCGTTGAAATACCAGCGGATCAGATAATTTGTTCCGGTTCTCAGATACTACTCGATATGGAAGTGCCCTTACCCACTGTGCAGGATGAATATACGGCGTTACGCCCCTACCCGTGTGATTTTTGCAGCAGGCGTTTTCGTAAAAAGGCCAGTTTAATGAATCACATCGTGGCACATCAGAATGATCGCCCACATCTGTGTAAACTGTGTGGCTCCCGCTTTTTCCGCCGTTCTGACTTGATAAATCACCTAAAAGCACATGCTGATGTTCCCGATCCTGAATTAGATGCCGAATTTATGAACTTTGTGGAACaggaacaacaacagcagaatgAACGGCAACCCAACGATCACTACTACGAACAAGATTGGACAACACAAATAAACTCCTTGCAGCGTAGTGAAAAATCTAGTCGCAAGCCGCATAATGCTAGCGGTAACAGCTCATCTACCTCAACTTCAACGACTGTGGGACGTGGACGTATCAGTCGGTTGAAGCCAAAAGAAGAAAGCTATGTATTGAATGAACCATTGCATAACGATGCTGAAGATGCAACAAGTGTAGACAACCCAACGACCCCTTATGAAGATTGTCAGCAATTGCAGGCGTCCACTGCTGTTGTAAAGTTTACACAAAATCAATCACCAGCCCATCAAAATAGCTTTCCTGTTATCGATGAGACCAAACCATTTGTGTGCCAACAATGTGGATTGGCATTTGCGCGGGAAAAAGCTTTGCTAGCCCATACAAAGaatcatcGGGAAGACCAGCCACATGAATGTAGTCAATGTAACGAGATGTTCTGGGACGCAAATAGTTTGCAGGAACATCTAAAAACACATACATTTGAAGATAGTAATTCCGAGTATGATCCTGATGAAGCGGAGGCTGAGGAAGAAACACAGAGTGAATCTGAATCGGATCGTTTATATGGCGAATTTTACTGCAGCGAATGTGGCATGTCGTTTCATCGGGAAGATTTGCTGCGCAGGCACTCGAAAACTCATTCAAAGACTAGAGTTGAAGCTGAAATGGAAAATGACAAGGATCGCCACTGTTGCAACACTTGCGGCGAGACGTTTGCTGAAGCTTTGGATCTTTTGGCTCATGCAGAAATACATGCGCGCTGCCCGCCTTTCaaATGTGTTCTATGCGGCGAGACTTTCTTCGAGGAGCTTACTATTAAACGACATCTACAATCGGTACACCCACATGATATGACACCCAATTCATGTATACTTTGTGGCAAAGAATGCCGCGATCGTAAAGCCTTAATAAAACATGCTTGGGATCATTCGCGTGAAAAATGTCATTCATGTTCGAaatgtggcaagaattttcataataaagctCGTCTGAAACGCCATATGGCCTCGCATCGTGATAAATCTGTTAGCTGCGATGTGTGCCATGAAGAGTTTCCCGACGGACGCACTCTATCCAATCATCGGCACTCGCACAGCAATGCTCCTGGTAAAATGTTTCCATGCCATGAATGCGGTAAAACTTTCGGCTCACGTAGTTCACAGCAGATACATGTGCGCATACATACCGGTGAGAGGCCTTATGGTTGTCGTTTTTGTTGGAAGGCTTTTGCCGATGGCGGTACGCTGCGCAAACACGAACGCATTCACACCGGCGAGAAACCCTACGCTTGTTCGGTATGCTCTCGCGCTTTCAATCAACGTGTAGTGTTGCGCGAGCATATCCGTTCGCATCACTCGGGATTGGATGTAAAACGTAATAGTTACTATTGTACGGTGTGCTCCATGGAAATGTCATCTTCATCTGATTTGGTACAACATCTAATACAACATAGCGACATGAATACTGCCATGCAGAGGCAGCCAGTGACTGGCCCACGTAAGTATAAAAGGCGTCGAAAGCTGAAGCCCCATGAAATCGCACGCTTACGCAGAGAGAGTCAGCTAAATGCCAACGGCAGTGATATCGAAATGTCAGACTTCGATATGGATAATGTGGATGATCTCTTGGGTATTGCCGAACCTCCTGCGCCAACCACCAAATCAACTTCAAAATCCAAACGtactaaaaccaaaaacaacaatcaTACTAATGCATCGTCGATGCGCGAAGGTGATAATGGTGTTATATTGCCCGATAATGATCTGCTAATAGAAAGATCTAGAAAGCCACGCTACAAATCGACCGGTAGTAATTCCGATACATTATGGCAAACGAAGCTGATCAATTCCAGTGCGGTGCTATCGAATTTGGAAAATACTTTGCAAAGCATCGATACACTTGTTGTAGGCTCAACGCACGCAACATCACATGTGGATGTCGAAGAACGCATACCCAGGTACAAATTGATAGAAAGCAGCGGTTCACAGCGCACACAGGAGGTGCAGATTAGCAAAAATCATAGTATGAGTAAATCACGTAAACGAACTGAAAAACCCCCAACCGCCAACAAAGTAACACGCCCGCGAATGATTCACACCGAAAAGCGTTCGGCTGGTAGCAATGAAGGTGGTGGACGGAAACGTTCGAAAACAATCATAACACAAAAAGAAGATACCGGCTTGGAATTGATGCGATCATCTACGCGAATTGTCGACGATTATGAGATTATTTCACCTGCTACCGAGTTGCCCAAACAGATAGGTCGAAGTCCGCCACGTATCAAGGAAGAGGATGCACAAAGTTATCAACGCCAACAGCAGCACCAACCGTGTACACTCCAATACAGTGCACATCGCACTGCATCCTCAAGAAATCTTGATCTTTACGATACACAATTTCTGGGTGGCACCGCAACGTTGCGCAAAGAAGCGTATGAGAAATTCAATCCTAGCATAGTTAATGATTTGGAAGAAATTCTACGTTCACCCATTAAATGTGATCGTACCGAACGTCATCGCTTCATTAGCGAATCATCAACACAGTTCCTTGAAGAAGAGCAACATAATATGATTAAAATCGAGCCGACATCGCCAGATTTGCGTGAGATTGTTGTTGGTGCGAGCGCTACTGATGGTGTGGGCGTAAGCAGTGGCACTGCGAGCGGTAGCAGTAATGAACGCAGACAGACGCGTAACGCACGCAATCGCACCGGTACAATTAATCGAAAATACCTAGAATTTGAGCCTGATTTGCACACCAATGGCGCGTCACGTACACAAAAGCGTAGTATCGCAAATGTCAGCAGTTCGAGgaataaacaaatcaaaaacaatagaAGGGAGAAAAAAGAAAGTTCCTTAAATCACCAAAGAACTCCCGTTTATTCTTCCACTTATAGCTTGGATGCGTATACGAAATCAAACGGCAGTGGCTcaatcaccaccaccaccgatTCATCATTTTCTTCACTCTCACCAACAGATAGCGTCACTGTGACTGCAACGACAATGGCGTCAAGTGTCGCAACAACTTCACCGACGACTGCAACACAGCCTGAGCGCAAGATACGTTATTTCGAATGTGAAATGTGTTCAGCCATCTTTCCAGATCGGGCACAGCTGCTGGATCACGTGcctatacatatctaa
- Protein Sequence
- MDRQTFEIQWIQGDPDDLKSAGGGQLIVKPQAPTEEELLANGVVDAGNATYHLVSGDDDDDDGNVSTAVDIDQIAAENLIFMARDGQMVTEIIGTNTADDNRALVVSASDNIDCEVALQQAAAAVMSSNELAQEQSDTGGGFDDSFVDNTPQMVTEEVITDDWVQHQGEERVEIPADQIICSGSQILLDMEVPLPTVQDEYTALRPYPCDFCSRRFRKKASLMNHIVAHQNDRPHLCKLCGSRFFRRSDLINHLKAHADVPDPELDAEFMNFVEQEQQQQNERQPNDHYYEQDWTTQINSLQRSEKSSRKPHNASGNSSSTSTSTTVGRGRISRLKPKEESYVLNEPLHNDAEDATSVDNPTTPYEDCQQLQASTAVVKFTQNQSPAHQNSFPVIDETKPFVCQQCGLAFAREKALLAHTKNHREDQPHECSQCNEMFWDANSLQEHLKTHTFEDSNSEYDPDEAEAEEETQSESESDRLYGEFYCSECGMSFHREDLLRRHSKTHSKTRVEAEMENDKDRHCCNTCGETFAEALDLLAHAEIHARCPPFKCVLCGETFFEELTIKRHLQSVHPHDMTPNSCILCGKECRDRKALIKHAWDHSREKCHSCSKCGKNFHNKARLKRHMASHRDKSVSCDVCHEEFPDGRTLSNHRHSHSNAPGKMFPCHECGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCSRAFNQRVVLREHIRSHHSGLDVKRNSYYCTVCSMEMSSSSDLVQHLIQHSDMNTAMQRQPVTGPRKYKRRRKLKPHEIARLRRESQLNANGSDIEMSDFDMDNVDDLLGIAEPPAPTTKSTSKSKRTKTKNNNHTNASSMREGDNGVILPDNDLLIERSRKPRYKSTGSNSDTLWQTKLINSSAVLSNLENTLQSIDTLVVGSTHATSHVDVEERIPRYKLIESSGSQRTQEVQISKNHSMSKSRKRTEKPPTANKVTRPRMIHTEKRSAGSNEGGGRKRSKTIITQKEDTGLELMRSSTRIVDDYEIISPATELPKQIGRSPPRIKEEDAQSYQRQQQHQPCTLQYSAHRTASSRNLDLYDTQFLGGTATLRKEAYEKFNPSIVNDLEEILRSPIKCDRTERHRFISESSTQFLEEEQHNMIKIEPTSPDLREIVVGASATDGVGVSSGTASGSSNERRQTRNARNRTGTINRKYLEFEPDLHTNGASRTQKRSIANVSSSRNKQIKNNRREKKESSLNHQRTPVYSSTYSLDAYTKSNGSGSITTTTDSSFSSLSPTDSVTVTATTMASSVATTSPTTATQPERKIRYFECEMCSAIFPDRAQLLDHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00083267;
- 90% Identity
- -
- 80% Identity
- -