Basic Information

Insect: Anomoia purmunda
Gene Symbol: -
Assembly: GCA_951828415.1
Location: OX639997.1:113034245-113037329[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.96 2.1e+02 4.5 0.2 1 17 92 108 92 109 0.88

2 12 0.45 96 5.6 1.7 1 21 206 226 206 227 0.91

3 12 1.7e-05 0.0037 19.5 1.2 1 23 273 295 273 295 0.98

4 12 0.00035 0.075 15.4 2.9 2 23 316 337 315 337 0.97

5 12 0.013 2.9 10.4 0.8 1 23 363 384 363 384 0.90

6 12 2.5e-05 0.0054 19.0 1.9 1 23 390 412 390 412 0.98

7 12 0.00021 0.046 16.0 0.8 1 23 439 461 439 461 0.97

8 12 7.4e-07 0.00016 23.8 1.4 1 23 467 489 467 489 0.96

9 12 0.00016 0.035 16.4 2.1 1 23 495 517 495 517 0.99

10 12 8.6e-06 0.0018 20.4 1.2 1 23 523 545 523 545 0.99

11 12 6.2e-06 0.0013 20.9 0.3 1 23 549 571 549 571 0.98

12 12 0.001 0.22 13.9 0.0 1 23 583 606 583 606 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.96	2.1e+02	4.5	0.2	1	17	92	108	92	109	0.88
2	12	0.45	96	5.6	1.7	1	21	206	226	206	227	0.91
3	12	1.7e-05	0.0037	19.5	1.2	1	23	273	295	273	295	0.98
4	12	0.00035	0.075	15.4	2.9	2	23	316	337	315	337	0.97
5	12	0.013	2.9	10.4	0.8	1	23	363	384	363	384	0.90
6	12	2.5e-05	0.0054	19.0	1.9	1	23	390	412	390	412	0.98
7	12	0.00021	0.046	16.0	0.8	1	23	439	461	439	461	0.97
8	12	7.4e-07	0.00016	23.8	1.4	1	23	467	489	467	489	0.96
9	12	0.00016	0.035	16.4	2.1	1	23	495	517	495	517	0.99
10	12	8.6e-06	0.0018	20.4	1.2	1	23	523	545	523	545	0.99
11	12	6.2e-06	0.0013	20.9	0.3	1	23	549	571	549	571	0.98
12	12	0.001	0.22	13.9	0.0	1	23	583	606	583	606	0.96

Sequence Information

Coding Sequence: ATGTCAGATAACACACACGGGAATATCGAAAATGTTAACGAAGTGTCTGATTACGGTGACGTCGTTTTGGTGCACAACATGGCAGGCAACGAGTATTTTGAGTATGAGGAAGACTGTATTGATACCGGATATGAGGATGAATCTTTAATTGAATATGTTGGAGAGGATGTAAAAAATGATGATTTTGTCGAACATGAAACTGAGGAAACTGGTATAAAAACACATACACTTAAAATTAACCGTCTGAACATCGATGGGCAATGTCAAGAAGTATTTCGTTGTTTAGAATGCGATGTAAATTTCGCCACAGTTGAAGACTTCACAAAAGTGCATCAAGAAATGCAAAAGCGGCAAACACCCAAAGTAACTGCGGGAGCGTTTCAGAAATCAAATAATGTGCAACAGCTTCTAGCACAGGAGGAGCAAGGTTGGATGGTCGTGAAGGAAGAAAATAATGTAAGGCAGGAAAATAGCACAGATACCTTCACTGCCAATGAAGAGGACTACGTAGAAATAAGTGAGGATATAAGTGAAAATACAGAATGTAATGACATTGGAAATATTGAGGCGGAGGAAGCTCTGGTCGCACTCGAGGAAGAAGATGaaggtgaaaaatatttttgctgcgaTTGCCAATTGGTATTTAACGATTTGGAAAGTGCGGAACAGCATGTCTGTAGTGCAATTAACTCTGCAAATGTGAACGAAGGCGCGGTAGATGAAAGTGTTAACGATAAGACAGAACACGATAATAACTTACTTATAAATCTCGAAAAACAAAACTcagcaaatgaaaatgatattaaaGAATTACAGTATCATTGTCCCGattgtggtaaaaattttaactcaataaaAGGCCTACAAATACACAGTCGCAGTCATAAAACGAAGGAAGCGAGACCAAAGAAAAACACTCCACATTTGACGGAAATAAAAGGCACAACATGTCGTATATGCAATACCAAATTTAGttcgtttaaaaatatgaaATTGCATATGAAAATCCACAATGCGCAACAGATGCGCACAATCGAGCAGGCGTTACCGGCTGGCGCTAAAACTCAGTACAACGATATGAATAAGTTCTTCTGTGAGATTTGCAATAagagctttgagcaaaacttgcttggcatacataaaaatatgcatCAACAGACAACCGAGTATAATTGTGGGATTTGCAATCGACACTTTGAGAATAGTAGCAGCTACATTATGCACATGCAAATGCATGCTGACAAGCCGACAAAATCGCGGAAACAGCAACCAAAGTCAACCGATAATAATGAGGATGTTAAGCAAAATGGACGCTTTGCTTGCCAATATTGCGGGCGTACCTTCCAGCGACCCTTTGAGAAAGTTCGTCACGAGCGTGTGCATACAGGTGAGAAGCCACATGCATGCGAGGTGTGCGGGAAAACTTTTCGCGTATCATATTCGCTGACACTACACTTGCGCACACACACCGATATACGGCCATATGTGTGCGCGACTTGCAATAAGCGCTTCAAATCTCAACCAGTATATGCTCATCATCTTCGCACCCACGAATCGGAACGCGCCTACAAGTGTGAAACGTGTTCGAAGTCTTACCGAACTTCGGTACAACTTTCAGCCCATCGAAATATACATTCTAAACCCTATAACTGCCCTGTATGCAATCGTCCTTTTGCCTCGTTGTATTCTGTGAAAATTCACATGAAGACGCACAACAAACCACATCGTACGGGTGATAATACAAAGTATAAATGCTATATATGTGGCGCAGAATATGCACGTATCCCCGCATTACGTATACACATGAAAGATTTGCATTTGATCGATTATGATACGAATCAGTCATTGGAGTTAGACGATGCAGTGCTATCGAGCGACGAACAAAATTCACAGCATGACCAATGTATGCAAGAAAACGAGGATGAGGACGAACATGAGGTGGATCACGAGGCAGCTGTGCTGATTGCGGCAGCTGCAGAAGCCGATTGTGCAGCTTATATAGAAGCTGCAACAGCGCAATCGTCAGATACTGCCTCGCCGAGCACAAGTGGTCTGGGATTGCATGCGCAGGTGAATCCGGTTTACGAGGCGGCACTGCAAAATGACGAGctgattGTGGACAACTACCAAACTGAGGAAATTGTTGCCGATTGGTTGTCAGAAGTTCGAAGAAATtcgaattga
Protein Sequence: MSDNTHGNIENVNEVSDYGDVVLVHNMAGNEYFEYEEDCIDTGYEDESLIEYVGEDVKNDDFVEHETEETGIKTHTLKINRLNIDGQCQEVFRCLECDVNFATVEDFTKVHQEMQKRQTPKVTAGAFQKSNNVQQLLAQEEQGWMVVKEENNVRQENSTDTFTANEEDYVEISEDISENTECNDIGNIEAEEALVALEEEDEGEKYFCCDCQLVFNDLESAEQHVCSAINSANVNEGAVDESVNDKTEHDNNLLINLEKQNSANENDIKELQYHCPDCGKNFNSIKGLQIHSRSHKTKEARPKKNTPHLTEIKGTTCRICNTKFSSFKNMKLHMKIHNAQQMRTIEQALPAGAKTQYNDMNKFFCEICNKSFEQNLLGIHKNMHQQTTEYNCGICNRHFENSSSYIMHMQMHADKPTKSRKQQPKSTDNNEDVKQNGRFACQYCGRTFQRPFEKVRHERVHTGEKPHACEVCGKTFRVSYSLTLHLRTHTDIRPYVCATCNKRFKSQPVYAHHLRTHESERAYKCETCSKSYRTSVQLSAHRNIHSKPYNCPVCNRPFASLYSVKIHMKTHNKPHRTGDNTKYKCYICGAEYARIPALRIHMKDLHLIDYDTNQSLELDDAVLSSDEQNSQHDQCMQENEDEDEHEVDHEAAVLIAAAAEADCAAYIEAATAQSSDTASPSTSGLGLHAQVNPVYEAALQNDELIVDNYQTEEIVADWLSEVRRNSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -