Apur001531.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639993.1:21499545-21505121[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 28 0.0062 1.3 11.4 1.4 1 23 243 265 243 265 0.98 2 28 5e-05 0.011 18.0 3.6 1 23 271 293 271 293 0.99 3 28 0.013 2.8 10.4 2.0 1 23 366 388 366 388 0.98 4 28 0.0029 0.63 12.4 3.6 1 23 394 416 394 416 0.98 5 28 7.8 1.7e+03 1.7 0.1 2 23 450 471 449 471 0.89 6 28 0.018 3.9 10.0 2.2 1 23 543 566 543 566 0.93 7 28 0.038 8.2 8.9 0.3 1 22 573 594 573 594 0.95 8 28 2.4e-06 0.00051 22.2 1.8 2 23 644 665 643 665 0.97 9 28 0.017 3.6 10.1 0.3 1 23 672 695 672 695 0.96 10 28 0.29 63 6.1 1.7 2 23 703 724 702 724 0.96 11 28 0.41 88 5.7 2.3 1 23 807 830 807 830 0.94 12 28 9.5 2e+03 1.4 1.7 3 21 841 859 841 860 0.84 13 28 0.091 20 7.8 1.5 1 23 869 892 869 892 0.96 14 28 0.00026 0.056 15.7 0.4 2 23 908 929 907 929 0.97 15 28 4.1e-05 0.0089 18.3 4.2 1 23 936 958 936 958 0.98 16 28 0.00025 0.053 15.8 1.2 1 23 1115 1138 1115 1138 0.96 17 28 0.0025 0.55 12.6 1.1 1 23 1175 1198 1175 1198 0.98 18 28 1.5e-05 0.0033 19.6 1.3 1 23 1213 1235 1213 1235 0.97 19 28 4.2e-05 0.0091 18.2 1.3 1 23 1242 1264 1242 1264 0.98 20 28 0.023 4.9 9.6 0.1 2 20 1291 1309 1290 1311 0.94 21 28 0.0032 0.68 12.3 2.4 1 23 1359 1382 1359 1382 0.97 22 28 0.42 91 5.7 1.0 1 23 1419 1442 1419 1442 0.93 23 28 0.0006 0.13 14.6 4.0 1 23 1473 1496 1473 1496 0.97 24 28 1.7e-05 0.0036 19.5 0.2 2 23 1531 1552 1530 1552 0.95 25 28 0.00015 0.032 16.5 3.2 1 23 1558 1580 1558 1580 0.99 26 28 9.2e-06 0.002 20.3 7.0 1 23 1586 1608 1586 1608 0.98 27 28 1.3e-06 0.00027 23.0 1.5 1 23 1614 1636 1614 1636 0.99 28 28 0.00018 0.038 16.3 0.1 1 23 1642 1664 1642 1664 0.96
Sequence Information
- Coding Sequence
- ATGGTATCGTACCAATGTCGCACATGTCGCGAAACAAATGTGGGCAATTTTTATTCGCTAACAGATCTTTTGGATGAAGAGCGCTATACTAAGAAGACGCTTGCGGACTTTCTTTGGGATATCGCAAAAATTAacaataaaaccgAAGACGCTAAACGTTTGCCACAACATATTTGCGGAGGTTGCTCACGCAAACTTAAAAACACCTATTCATTTGTTTTACAAGcgcaaatagcaaataaaaaactatatgcTAGTTTATATATCGAAAATGTTGGCTCGGATGCTGGCAAGGAGATGGGAGGCAACCACAATGATTGCCTTTTGGAGGCTCCTATTGATATACCCATGCggcaaatggaaattaaaaaggagTCTGATAACGTTAATGAAGTAGTATCAGATTGCCCGGAGGATTTGACTGACATGAATACAAATGAAATTGATCTAGAGAAAAGAAGAGCTGGTGAAATTATTCAATTAGTAAAGGAAGAAATACCTCTGGAAGAAGATGCGGACAGTGTGTGCACAGATGATAGCATTGGCATCGACCCTATAACAACAGTGGAGACCAGTTGGGCCACTGAAAAGGCAGGAGATGATGATTTGGAAATCAGGAGTGATTTAGATTCCACCAAAAATGAACCACCTCCTACAAAACGGCGGCGAGGAAGACCCCAATCTGCTATAAGATTTGACTATAACTTTTCTAAACAAGATAATCGGTATTATTGCAATAAATGCGAGAAGAGCTTTGCTTGGAAAAAAGATGCAGATCGCCACATGAAATCACACCTGGGCATTTTTCCATACCAATGTGACCAATGCGAAAAACGGTTCCAGCGCaaagacaaatttaataaacatttgaaaatacattCCAAAGCAGATACCGAAAACAGTACAGGTGGCAGTTTAGATATACAATCAGGGTTACAGCTCGGAATGGAAGTTGTGGAAACGAGTGATGATGACCAGAGCGATGAAGATAGCGCTGACCCcaCATCGACTTCAACAATACCATCAAAACGTCGACGTGGCAGACCActctctacaaaaaaattagaattcacGTTTTGTAATGATGACGGTCGTTACCACTGCAATAGGTGTGACAAAGACTTTGCTTGGAAGAAAGATGTTGAGCGTCATATAAAAAGCCATTTCGGAATTTTTCCATACGAATGTAGCCAGTGCAACCATCGCTTCCAGCGTAAAGACAAGTTTGCCGAACACTTGAAGATTCATAACAAACGTGAAGCCGGAACTAAACGATCACGGCCATCAGTGCGGGCAGAGTGGAATTTTGCGGAACGTCTTTATACAGAGCAACGATTCCGTTCGGTCGAATGCAAACTCTGCActgaagttattttaaatatagaagGCTTAAGAGAGCACTTGCAAACGCACACTCAGCCGGATACATTGCGTTTAGATGTTGAAGGTGATGTCGTTAAAGAACTATTTCCTAATTCTAATGGCGCCTTGGTCAAAATTAAAGCGCAAATATGCAAAGATATTAAAGATAAACGCTTTACTAAATATTATGCCATTGTTAATGCCTACGGTTATGAAATGGCACTAAGTGATTCTGATGCAGAGTCTGACTCTAATGAAACAAAATACGAGTGTGAGTTATGTCATACAAAGTTGGCCCGCAAGTATCAACTGTTCCAGCATTCGAAGGCAGACCACGCACAAGAAAAACTGCCACATAAATGCAACGTTTGCAAGTTGGAATTCGTAAGTGCAGCAATGTTTGAGTTACATTCGCGAACCCAGTGCAGGAACCGTGATAAAAAGTACCAATGTCTAAAATGTCCGGGCAAGTTTGTGTGGTTGCAGAACCTGCAAGGGCACAATTGCTCCAATCGTCTTAATGTATGCGTCCCCAAGTGGCCAGATAAGCGTAAACTCCATTtattacagtgcaatttttgCGATAAAACGTTCCGTTATGCGACCGACTTGAAGCGCCACCAAGAGACGCATAACTTGCACAGTCGCTCCCACGTGTGTGCTATCTGTAGCCAACCATTCTTGAAGGCCGAGAACTTGCGTCAACATTTACGGCAAGCTCATGAGCAGATAAAACGACGCATTGAATGCTGTTTGTGTACCGAAAAACTGCAAACGCTTGCTCAGCTTcgaaaacatttgcaaaatcaTTCGGACGGTTGGACTGGTATCAGGTACACGGAGGGCAAGTATTTTAAGGTACACTGGCCGCAAGGTTGCCGGGGAAAGGAAGGAGAGGTGGAACAGAGTATTCTTATCGATTTTGctgggcaaaatttaacaaactattACTCAGCCATGGATGAGAGTGGCAACGAGCTGGATTTGTTCGACTCGGAAACAGAATTGGAATTGCAATCAGAAAATCCGTCCAGTGAAAACTCTTCATCCACCTCCTACACCTGCGATTTATGCAAGCAGGTATTTTTCAGAAGAATACGAATTCTGCAACATCAACATAGCGCACACGCTGAGGAGAAACAACCATTACCACATGGTTGTACGCGTTGTGATAAGCGGTTCGTTTGTTTGGGTTTATTGGATCAGCACTATAAACGCGATTGTGGCAATATCTTTAAACGTTTCGATTGTCAACGCTGTTCGGCGCGTTTTGTATGGGAGGAAAATCTACAACATCACATGCAACGTCAGCACATAGATCCCGAGCAGCAAATAAGCCGCCAACTAGCAAATAAACTCCAATGTGACCAATGTAATAAAGTGTTTGTTTGGCCGAAAGATTTAACACGCCACAAACGTATACATATGCCCGACGATGAGAAGTTCGAATGTTTATACTGTGAACGCAAATTCTATCGAAAGGATCATTTGCAAACCCATTTGAAAGTGCATGGTGCCGATGGCAACATGGCTGCAGCGACTACAACTGCGATAGCTAGCAAACGCGAGCTAAATCGCAAGGTTAATGCTGTCGATCCCCATCTTTGCAAACCGAATGGTTTGAAATGCGTTCAATGTAAAATCTGCCTCTCTAagcacacaaaaattgccgatcTGCGCACACATCTTTTAGAGCATCGCAGCGATATTTCATTGTCGCAACACGTTACAACCAATTCAGAAATGTCTCTACTATTCTATCCCGATGAGGCACCAATGTCTATGGAGCTGCTAATATCTCGGATGAAAGCAGATATAAATGCCAGCCAGCTAGACCGGTTTTATTCAATCACTAATGAATTGGGCCATGAGCTAAGCATAAGCGGCTCTGATACTGATGACACAGATTCGGATTCCGAACCTGATCAAACATTAGATATTACTTTAGGCTATAACTTTCATCATCCAAGACGTTCTATATACAATTGCGATTTGTGCAGCATTACATTTACACGGAAGTATAAACTATTTTCACATCAAGCGAGTGCGCATAGTTGGAATGAAGCGCCGCATGTTTGCCAGCATTGTCAAGCGCACTTCCTTTGCGATAAGCTCTTACAGTCTCATTACCGCCACCAGTGCAAGAATTTGCTGAAACGTTACGTTTGCCGCAAATGCCCGCAGCGCTTTATGTGGAAGGAGAATCTTAAAATGCATTTGCGTACAATGCATCCCGACAGCGAGGAAGTCAAAAAGGGTTTTGCACCTAGTTCATTTGATTGTGAAGAATGTTCGAGAAGCTTCCAGATGCAGAAAGATTTAACTCGACACATGATGACACATCGTGCTGATGCTACTGTCTTTCCTTGCCTCTGGTGTCCACGTAAATTTTATCGTAGAAGCAATTTGTATTTGCACATCAAACGTCATGGTGTATCATCGCATCAGCTGAGTGCAGCGGCAGCTCACATTACTGCATGTAAAGGACCAAATGGGAAGAAGCAAATACAGTGTCGCGTATGTAATATAGAATTCAACAGTATGTCGGCTTTACGCACTCATTTGAGTCAAGAGGCATCGAATGTCGTGTCTGCGCATCACAATTACAATTCTCAACAGAACTATTCCATAATGAATGAGTTGGGCTACGAATTGAACATCGATGATTCGGAGACGGATGAGGAAGGCAATGAAATCCTTGCACCTAAGTTGTACAAGTGTCAAATGTGTGGGTTGACTTGCAAGAGGCGGTATGAAATGGGTCAACATCAGTTATCGGTCCACAAACACGAACACATACAACTGAAGTGTGACAAGTGTGTTTTTAGAACAGTTTCGAATGATATCATGGAACATCACTTACGCACACAATGCAACAATACCGAAAAACTACATCAATGCAAACAGTGTTCATACAAATTCATGTGGCCTGAGAATTTGGACACCCACGTGAATTTAGTGCATCCATCATCACCAGAAGAGACGCAGACAATTTCAGCTGCTCCAAACGATGCCGCCTCCTCCGGTCGCGTCGAGACTGTCCCACCACAAGAATTTCATTGTAATAAGTGCGATCGTCGCTATAACCGCAAAGACCGGCTATTGGCTCACATCAAAAAGATGCATGGTGCAGATAGTGATGCTCCTAGTTGTAGCATGAATGCTGATAGAGAAGCTTTAAGTGTACCAACACATTCTAAGAAAACtgggccaaaagaaaaaaagtttctttgTGCATTTTGCGGTCGTGCTGTGAGCTCATCATCAAATTTGATAGTTCATATGCGACGTCACACTGGGGAGAAGCCATTTCAGTGTGAATTCTGTGACAAAGCTTTTCCGCGGTCCTCTGATTTGTCTTGTCATCGACGTACTCACACGGGCGAAAAACCGCATCGCTGCACCGTCTGCAATAAGTCCTTTTCGCGCTCGTACAAATTGCATACACACATGCGTATACATTCTGGAGAACGGCCATACAAGTGCACCTattgtgaaaaaagttttacacAATCCAATGACCTTGCCCTGCATGTACGCCGTCACACCGGTGAACGGCCGTATGTGTGTAATATTTGCGGTGAAAGCTTTATTCAGGGAACCGCATTGAAGAATCATCGCACGGCTCATGGACATTTTGATGGGAATGAAACACAAGCCATGTCTGTGGATGAAGAACAAACCAGTAATATGTTACAATTGGACGACCAGGGTAACAGTTTAATACAGTTGTAA
- Protein Sequence
- MVSYQCRTCRETNVGNFYSLTDLLDEERYTKKTLADFLWDIAKINNKTEDAKRLPQHICGGCSRKLKNTYSFVLQAQIANKKLYASLYIENVGSDAGKEMGGNHNDCLLEAPIDIPMRQMEIKKESDNVNEVVSDCPEDLTDMNTNEIDLEKRRAGEIIQLVKEEIPLEEDADSVCTDDSIGIDPITTVETSWATEKAGDDDLEIRSDLDSTKNEPPPTKRRRGRPQSAIRFDYNFSKQDNRYYCNKCEKSFAWKKDADRHMKSHLGIFPYQCDQCEKRFQRKDKFNKHLKIHSKADTENSTGGSLDIQSGLQLGMEVVETSDDDQSDEDSADPTSTSTIPSKRRRGRPLSTKKLEFTFCNDDGRYHCNRCDKDFAWKKDVERHIKSHFGIFPYECSQCNHRFQRKDKFAEHLKIHNKREAGTKRSRPSVRAEWNFAERLYTEQRFRSVECKLCTEVILNIEGLREHLQTHTQPDTLRLDVEGDVVKELFPNSNGALVKIKAQICKDIKDKRFTKYYAIVNAYGYEMALSDSDAESDSNETKYECELCHTKLARKYQLFQHSKADHAQEKLPHKCNVCKLEFVSAAMFELHSRTQCRNRDKKYQCLKCPGKFVWLQNLQGHNCSNRLNVCVPKWPDKRKLHLLQCNFCDKTFRYATDLKRHQETHNLHSRSHVCAICSQPFLKAENLRQHLRQAHEQIKRRIECCLCTEKLQTLAQLRKHLQNHSDGWTGIRYTEGKYFKVHWPQGCRGKEGEVEQSILIDFAGQNLTNYYSAMDESGNELDLFDSETELELQSENPSSENSSSTSYTCDLCKQVFFRRIRILQHQHSAHAEEKQPLPHGCTRCDKRFVCLGLLDQHYKRDCGNIFKRFDCQRCSARFVWEENLQHHMQRQHIDPEQQISRQLANKLQCDQCNKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQTHLKVHGADGNMAAATTTAIASKRELNRKVNAVDPHLCKPNGLKCVQCKICLSKHTKIADLRTHLLEHRSDISLSQHVTTNSEMSLLFYPDEAPMSMELLISRMKADINASQLDRFYSITNELGHELSISGSDTDDTDSDSEPDQTLDITLGYNFHHPRRSIYNCDLCSITFTRKYKLFSHQASAHSWNEAPHVCQHCQAHFLCDKLLQSHYRHQCKNLLKRYVCRKCPQRFMWKENLKMHLRTMHPDSEEVKKGFAPSSFDCEECSRSFQMQKDLTRHMMTHRADATVFPCLWCPRKFYRRSNLYLHIKRHGVSSHQLSAAAAHITACKGPNGKKQIQCRVCNIEFNSMSALRTHLSQEASNVVSAHHNYNSQQNYSIMNELGYELNIDDSETDEEGNEILAPKLYKCQMCGLTCKRRYEMGQHQLSVHKHEHIQLKCDKCVFRTVSNDIMEHHLRTQCNNTEKLHQCKQCSYKFMWPENLDTHVNLVHPSSPEETQTISAAPNDAASSGRVETVPPQEFHCNKCDRRYNRKDRLLAHIKKMHGADSDAPSCSMNADREALSVPTHSKKTGPKEKKFLCAFCGRAVSSSSNLIVHMRRHTGEKPFQCEFCDKAFPRSSDLSCHRRTHTGEKPHRCTVCNKSFSRSYKLHTHMRIHSGERPYKCTYCEKSFTQSNDLALHVRRHTGERPYVCNICGESFIQGTALKNHRTAHGHFDGNETQAMSVDEEQTSNMLQLDDQGNSLIQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01189740;
- 90% Identity
- -
- 80% Identity
- -