Basic Information

Gene Symbol
ZFX
Assembly
GCA_951828415.1
Location
OX639993.1:21506387-21512321[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 29 0.0022 0.48 12.8 0.6 1 23 237 259 237 259 0.97
2 29 1.6e-05 0.0035 19.5 3.0 1 23 265 287 265 287 0.98
3 29 0.0012 0.27 13.6 1.3 1 23 347 369 347 369 0.98
4 29 3.3e-05 0.0072 18.6 2.9 1 23 375 397 375 397 0.99
5 29 0.54 1.2e+02 5.3 0.5 2 23 431 452 430 452 0.96
6 29 0.00088 0.19 14.1 3.7 1 23 524 547 524 547 0.98
7 29 0.15 33 7.0 0.5 1 22 554 575 554 575 0.94
8 29 9.9 2.1e+03 1.3 0.7 1 19 584 602 584 605 0.89
9 29 6.7e-06 0.0014 20.8 0.9 2 23 625 646 624 646 0.95
10 29 0.0016 0.35 13.2 0.7 1 23 653 676 653 676 0.96
11 29 0.28 61 6.2 1.7 2 23 684 705 683 705 0.96
12 29 0.4 85 5.7 2.3 1 23 788 811 788 811 0.94
13 29 3.9 8.4e+02 2.6 1.5 3 21 822 840 821 841 0.89
14 29 0.088 19 7.8 1.5 1 23 850 873 850 873 0.96
15 29 0.00025 0.054 15.8 0.4 2 23 889 910 888 910 0.97
16 29 2.9e-05 0.0062 18.8 4.1 1 23 917 939 917 939 0.98
17 29 0.00024 0.051 15.9 1.2 1 23 1089 1112 1089 1112 0.96
18 29 0.00076 0.16 14.3 0.8 1 23 1149 1172 1149 1172 0.98
19 29 1.2e-05 0.0026 19.9 1.5 1 23 1187 1209 1187 1210 0.95
20 29 4.5e-05 0.0097 18.2 1.8 1 23 1216 1238 1216 1238 0.98
21 29 0.022 4.7 9.7 0.1 2 20 1265 1283 1264 1285 0.94
22 29 0.0031 0.66 12.4 2.4 1 23 1333 1356 1333 1356 0.97
23 29 1.4 2.9e+02 4.1 0.9 1 23 1393 1416 1393 1416 0.90
24 29 0.0014 0.3 13.5 5.0 1 23 1430 1453 1430 1453 0.98
25 29 0.13 27 7.3 0.2 3 23 1482 1501 1481 1501 0.97
26 29 5e-07 0.00011 24.3 1.2 1 23 1507 1529 1507 1529 0.99
27 29 1.5e-07 3.3e-05 25.9 3.3 1 23 1535 1557 1535 1557 0.98
28 29 4.2e-07 9.1e-05 24.5 1.2 1 23 1563 1585 1563 1585 0.99
29 29 0.00097 0.21 14.0 0.1 1 21 1591 1611 1591 1615 0.92

Sequence Information

Coding Sequence
ATGGTTTCATACCAATGTCGCACATGTCATGCAACAAATATGGGCAACTTCTACCCACTATCAGATCTTGTAGATGAAGAGCGGCACTCTAAAAAAACGCTTGCAGACTTCCTTTGggatattgcaaaaattaacaataaaaccgACGACGCCAAGCGCTTGCCCCAAAATATTTGCAGAACTTGTTCACGTAGGCTTAAAAATACGTATTCATTCGTATTGCAAGCACaggaagcaaataaaaaactatgtgCTAGTTTATTATCAAGCAGACGAAGCGATTGCCTGCTGGAGGCTCCTATTGATATACCAAACAGCCAAACACCCACAGTAATAAACGAAATTGAGAGAGAAGAAGAGTTCATTGACGAGAAAGTTGCAAATGGACCAAGTAATTTGACTGACGGTAATGAAATTCAAGATGTTGTGGAAGAAAAGTATACAGCAGAAGTTATTGAATTCGTAATGAAAGatgaatattttgaagaaggcgATGAGAGTTTCGGTACAGTAGAAAATAGCAATGGATTCGATCCTAAAACTACATTTGAAATCAGCTGGAACACTGAAAATAAGCTTATCGAAGATTTGGGAGATCAGAGCGACCTAGATACTAGCAAAAAaaaatcttcGTCTACAAAACGACGTCGTGGAAGGCCGCCAATAGAGAAATCATCGCACTACACCTTTTGCGATGAAGATAAAAGGTATTATTGCAATAAATGTGACAAAAGTTTCGCTTGGAAAAAAGATGCCGGACGCCATATGAACGTACATTTGGGTATTTTTCCATTTGAATGTGACGAATGTAATAAACGTTTCCAACGAAAGGATAAATTGaataagcataaaaaaatacatttcaaacaAAACGCCAGAATTAGTACAAATCACAAAGAGGGTGAAGCGAGTGATGGTCTGGGAGACGATGATTCGGCGGAGCTctCTTCGACATCTCCACCTCCAACAAAACGACGACGAAATATATCTCCATCtacgaaaaaatttgagttcACCTTTTGTAATGATGACAGTCGTTACCACTGTAATGGGTGTGACAAAAGCTTTGCTTGGAAAAAAGACGCTGAACGTCATATCAAAAGTCATTATGGCATTTTCCCTTACGAATGTGATCAGTGTAATCGACGCTTTCAACGCAAAGACAAGTTGTCCAATCACttgaaaactcataaaaaacgTGAACGAGGAGTTAAACGTCCTAGACCAGCATTACGGTCAGAGTGGAATTTTGCTGAACGGCTTTATACAAAGGAACGATCTGGTTCGGTTGAATGTAAATTATGTACTGAAGTTATTCATAGCATAAAATCTTTAAGGCAACATTTGTTAATACATGATCACCCCGATACTTTGCGTTTAGATGTTGAAGGTGATGTCGTTAAAGAATTGTTCCCGAATTTTGATGGCGACATGACCAAAATTAAGGAACAAATATGCAAAGACATTAAGGACAAacagtttacaaaatattatgcCATTGTTAATGCCTACGGTTATGAGATGGCACTCAGTGATTCTGATGCAGAGTCTGACTCTGATGAAACAAAATACGAATGTGAGCTATGTCAGGCAAAGTTTACTCACAAGTATCAACTGTTTCAGCATTCGAAGACCGAACATGCGCTTGCAACACACCCACATAAATGTAATGTTTGCAAATTGGAGTTTGTGAACGAAATAATGTTCGAATTACATTCCCGTACTCAGTGCAGAAACCGTGATAAAAAGTACCAATGTCTCAAATGTCCGGGCAAGTTTGTGTGGTTACAGAATCTGCAAGAACATAATTGCTCCAATCGTCTCAATGTATACCTGCCGAAATGGCCAGACAGGCGCAAACTACATCTATTACAGTgtaatttttgtgataaaacTTTCAGTTATGCGACCGACTTAAAGCGGCACCAAGAGGCACATAACTTGAACAGTAATTCCCACGTGTGTGCTATTTGcaatcaaacttttttgaagGCTGACAACTTGCGTCAACATTTGCGGCAAGCTCATGAGCAGATAAAACGGCGCATTGAATGCTGTTTGTGTACCGAAAAACTGCAAACACTTGCTCAGCTTcgaaaacatttgcaaaatcaTTCGGACGGTTGGACTGGTATCAGCTACACAGAAGGAAAGTATTTTCAGGTGCACTGGCCACAAGGTTGCCAGGGAAAAGAAGGAGAGGTTGAACAGAGTATTATTATCGATTTTGAGGGACACAATTTAACGAATTATTACTCAGCCATGGATGAGAGTGGCAACGAGCTGGATTTGTACGACTCGGAAACAGATTTGGAATTGGAATCAGAAAATCCGTCCAGTGAAAACTCTTCATCCACCTCCTACACCTGCGATTTATGCAAGCAGGTATTTTTCAGAAGAATACGAATTCTGCAACATCAACATAGCGCACATGTAGAAGAGAAACAACCATTACCACATGGTTGTACGCGTTGTGATAAGCGGTTCGTTTGTTTGGGTTTATTAGAGCAGCACTTTAAACGCGATTGTGGTAACGTCTCTAAACGTTTCGATTGTCAACGCTGTTCGGCGCGTTTTGTATGGGAGGAAAATCTACAACATCACATGCAACGTCAGCACATAGATCCCGAGCAGCAAATAAGCCGCCAACTAGCAAATAAACTCCAATGTGACCAATGTAATAAAGTGTTTGTTTGGCCGAAAGATTTAACACGCCACAAACGTATACATATGCCCGACGATGAGAAGTTCGAATGTTTATACTGTGAAcgcaaattttatcgaaaagaCCATTTGCAAAATCACTTGAAAGTGCATGGCAATAGCAAGGCTGCGGAGCCCgcaacaaacacaaacaaacgcGAGATTACTCGTAAGGTTAATGCTATCGATTCACATCTTTGCAAACCGAACGGGTTGAAATGCGTTCAATGTAAAATCTGCCTCTCTAAGCACACAAAAATAGCCGATCTGCGCACACATCTTTTAGAGCATCGCAACGGCATTTCATTGTCGCAACATGCTACAACTAATTCGgaattgtctttaattttcTATCCCGATGAGGAACCAATGCCTACGGAGCTACTAATGTCCCGAATGAAAGTAGATATAAATGCTGGCCAGCTAGATCGGTTTTATTCAATCACTAACGAATTGGGTCATGAGCTAAGCATAAGCGGCTCTGATACTGATGACACAGATTCGGATTCCGAACCTGACGATGCATTGGGCAATAACATTCGTCATCCAAGACGTTCTACATACAATTGCGATTTGTGCAGCATTACATTTACACGGAAGTATAAACTATTTTCACATCAAGCGAGTGCGCATAGTTGGAATGAAGCGCCGCATGTTTGCCAGCATTGTCAAGCGCACTTCCTTTGCGATAAGCTCTTACAGTCTCATTACCGCCACCAGTGCAAGAATTTGCTGAAACGTTACGTTTGCCGCAAATGCCCGCAGCGCTTTATTTGGAAGGAGAATCTTAAAATGCATTTGCGTACAATGCATCCTGAGACCGAGGAAATTAAAAAGgTTTTTGCACCAAGTTCATTTGACTGTGAGGAGTGTTCGGGAAGTTTCCCGAGACAGAAAGAATTGACTCGTCACATGATGACACATCATTCTAATTCCATCGGTTTTTCATGCCTCTGGTGCCCACGTAAATTTTATAGGAAGAGCAATTTGTATTTGCATATCCAGCGGCATGGTGTATCATCGCATCAGCTGAGTGCAGCGGCAGCTCACATTACTGCATGTAAAGGACCAAATGGGAAGAAGCAAATACAGTGTCGCGTATGTAATATAGAATTCAACAGTATGTCGGCTTTACGCACTCATTTGAGTCAAGAGGCATCGAATGTCGTGTCTGCGCATCACAATTACAATTCTCAACAGAACTATTCCATAATGAATGAGTTGGGCTACGAATTGAACATCGATGATTCGGAGACGGATGAGGAAGGTAATGAAACCCTTGCACCTAAGTTATACAAGTGTCAAATGTGTGGGTTGACTTGCAAGAGGCGGTATGAAATGGGTCAACATCAGTTATCGGTCCACAAACACGAACACATACAACTGAAGTGCGAAAAGTGTGCTTTTAGAACGGTTTCGAATGACATCATGCAACATCACTTACGCACACAATGCAACAATACCGAAAAATTGCATCAATGCTCGCAGtgttcatataaatttatgtggCCTGAGAATTTGGACACCCACGGGAAGTTGGTACATCCACCAACGGCAGATGATACATTCGTTCCTCCACAAGAATTCCGCTGCGATAAGTGTCATCGTCAATATAACCGCAAAGACCGGCTTTTCGCTCATATCAAAAAGATGCATAGCGTAATTGGCAATGCTTCTAGTAGTAAAGAAACCTCCAAACAGTCTAGTAAAAAAACCGAGCCGAAAGAAAATAGGGTACTCTGTTCATTTTGCGGTCTCGCTGTGAGCTCAACCAACATGATTGTTCATATGCGACGTCACACTGGAGAGAAGCCATTCCAATGTGAATTCTGCGATAAAGCTTTCCCGCGATCCTCAGATTTGTCTTCGCATCGGCGCACTCATACAGGCGAAAAACCTCATCGTTGCACGGTTTGTGATAAATCTTTTTCGCGCTCGTATTGGTTGCGCACCCATATGCGCGTACATTCCGGCGAAAGACCGTACAAGTGCACCTACTGCGAGAGAAGTTTTACACAATCCAATGATCTTGCAGTGCATATACGCCGACACACCGGCGAACGACcctatatttgtaatatttgcgGAGAGACTTTCATTCAGGGAACGGCGTTGAAGAATCATCGTATAGCTCGCAGACATTTCGTCGATGCGGATGAAACGCAGGATATTTCTTTGGATGAAGAACAAACAAGAGATATGTTACAATTCAACGAGCAGAGTAGCAATTAA
Protein Sequence
MVSYQCRTCHATNMGNFYPLSDLVDEERHSKKTLADFLWDIAKINNKTDDAKRLPQNICRTCSRRLKNTYSFVLQAQEANKKLCASLLSSRRSDCLLEAPIDIPNSQTPTVINEIEREEEFIDEKVANGPSNLTDGNEIQDVVEEKYTAEVIEFVMKDEYFEEGDESFGTVENSNGFDPKTTFEISWNTENKLIEDLGDQSDLDTSKKKSSSTKRRRGRPPIEKSSHYTFCDEDKRYYCNKCDKSFAWKKDAGRHMNVHLGIFPFECDECNKRFQRKDKLNKHKKIHFKQNARISTNHKEGEASDGLGDDDSAELSSTSPPPTKRRRNISPSTKKFEFTFCNDDSRYHCNGCDKSFAWKKDAERHIKSHYGIFPYECDQCNRRFQRKDKLSNHLKTHKKRERGVKRPRPALRSEWNFAERLYTKERSGSVECKLCTEVIHSIKSLRQHLLIHDHPDTLRLDVEGDVVKELFPNFDGDMTKIKEQICKDIKDKQFTKYYAIVNAYGYEMALSDSDAESDSDETKYECELCQAKFTHKYQLFQHSKTEHALATHPHKCNVCKLEFVNEIMFELHSRTQCRNRDKKYQCLKCPGKFVWLQNLQEHNCSNRLNVYLPKWPDRRKLHLLQCNFCDKTFSYATDLKRHQEAHNLNSNSHVCAICNQTFLKADNLRQHLRQAHEQIKRRIECCLCTEKLQTLAQLRKHLQNHSDGWTGISYTEGKYFQVHWPQGCQGKEGEVEQSIIIDFEGHNLTNYYSAMDESGNELDLYDSETDLELESENPSSENSSSTSYTCDLCKQVFFRRIRILQHQHSAHVEEKQPLPHGCTRCDKRFVCLGLLEQHFKRDCGNVSKRFDCQRCSARFVWEENLQHHMQRQHIDPEQQISRQLANKLQCDQCNKVFVWPKDLTRHKRIHMPDDEKFECLYCERKFYRKDHLQNHLKVHGNSKAAEPATNTNKREITRKVNAIDSHLCKPNGLKCVQCKICLSKHTKIADLRTHLLEHRNGISLSQHATTNSELSLIFYPDEEPMPTELLMSRMKVDINAGQLDRFYSITNELGHELSISGSDTDDTDSDSEPDDALGNNIRHPRRSTYNCDLCSITFTRKYKLFSHQASAHSWNEAPHVCQHCQAHFLCDKLLQSHYRHQCKNLLKRYVCRKCPQRFIWKENLKMHLRTMHPETEEIKKVFAPSSFDCEECSGSFPRQKELTRHMMTHHSNSIGFSCLWCPRKFYRKSNLYLHIQRHGVSSHQLSAAAAHITACKGPNGKKQIQCRVCNIEFNSMSALRTHLSQEASNVVSAHHNYNSQQNYSIMNELGYELNIDDSETDEEGNETLAPKLYKCQMCGLTCKRRYEMGQHQLSVHKHEHIQLKCEKCAFRTVSNDIMQHHLRTQCNNTEKLHQCSQCSYKFMWPENLDTHGKLVHPPTADDTFVPPQEFRCDKCHRQYNRKDRLFAHIKKMHSVIGNASSSKETSKQSSKKTEPKENRVLCSFCGLAVSSTNMIVHMRRHTGEKPFQCEFCDKAFPRSSDLSSHRRTHTGEKPHRCTVCDKSFSRSYWLRTHMRVHSGERPYKCTYCERSFTQSNDLAVHIRRHTGERPYICNICGETFIQGTALKNHRIARRHFVDADETQDISLDEEQTRDMLQFNEQSSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-