Apur037364.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639996.1:72278019-72278631[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-07 0.00015 23.3 0.0 15 44 33 62 20 63 0.87 2 2 8.4 6.9e+03 -1.3 0.0 16 22 136 142 133 145 0.82
Sequence Information
- Coding Sequence
- ATGCCGAGAGTATATAAACGAAAGGAGGGAGTGCGGGCTCGAGTATGTGCATGGAGCACGGAGAGCCTGGAGGAAGCGTTCATTGAAATGGACAAAAAAAACCTGGGGATAAACCAAATATCCCGAAAATTTGGAATTCCATCGAGGACATTGCGAAGACGGTATGCtgttaaaaatactaaaaaactgACTCTAGgaaAACTTCCTACTTTGGATTTTGACAACGAGAAAAGGCTAGTAAAGCACATTTTGAAGCTTGGTGATGCAGGATTTCCCCCAAATAGACAAGGTATACGAATGTTAGCTtatcaatttgctaaaaaactagggataaaacacaattttaaccACGAAACCGAAATGGCTGGAAGTGCATGGTGCAAAAGTTTTATTGAACGAAATTCAGAGCTGTCCATCAGACAAGCTGAGGGTTTATCCGTGGCTAGAGAAGAAGTTAATAGCTTCTATGATCTTTTGATCAAAGTTTTGACCGAAAATGATCTGGTGGACaaaccagaaaaaatattcaatatggaCTAA
- Protein Sequence
- MPRVYKRKEGVRARVCAWSTESLEEAFIEMDKKNLGINQISRKFGIPSRTLRRRYAVKNTKKLTLGKLPTLDFDNEKRLVKHILKLGDAGFPPNRQGIRMLAYQFAKKLGIKHNFNHETEMAGSAWCKSFIERNSELSIRQAEGLSVAREEVNSFYDLLIKVLTENDLVDKPEKIFNMD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00775963;
- 90% Identity
- -
- 80% Identity
- -