Apur020826.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639994.1:57377737-57382972[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-06 0.0052 18.3 0.0 6 29 201 224 199 225 0.92 2 2 0.015 13 7.5 0.0 6 25 261 280 259 280 0.89
Sequence Information
- Coding Sequence
- atgataatttgCGATACAACCAGTGTGAATACTGGCAGACACCATGGTGTTGTCACTcgcctacaaaattttttcaaatccttTTCATTGCCCGCTCCACAGTATATTGGTTGTCAACATCATGTGCTAGATTTGATGTTAAAACATGTCATGGATGAGCTTTTAGAGGGAAAAACATCATCGCCcaatatttcatacaattttattccaaatttaatagaaaattacgATGATCTAAAAAAAGAGTATGAACAAAATAAAGAGTGTATTAAGGTTAAAAGCATTAAATGGCGAAATGACATGCAATACTTATATGAATTGGTCGAATCTTTTAAATACTTCGAGAAAAATGAACGTTTTccctacataaaatttaaagcaatacCAGCACTCAGTAATGCCCGTTGGAATTCTAGAGCTATTTTGGCACTTTTAGCCTTTATACTTATTCCTGAATATCGTTTGCAATTATATCCTATTTATAATGTGCCGTTGGATGATGATTACAAACTTCCAACCATAATGGACGATGAGGTGTCATCAGATGATGATAAAACCTACAAACCACCTGCCAgcctattacaaaaaaagaagccTATGAAACCAGCTGTTAATTTGGTTATGAATGCAAACGTTAGCACTAGAAAGGccgcaaaaatatATAATGTGCCGTTGGATGATGATTACAAACTTCCAACCATAATGGACGATGAGGTGTCATCAGATGATGATATTACCTACAAACCACCTGCCAgcctattacaaaaaaagaagccTATGAAACCAGCTGTTAATTTGGTTATGAATGCAAACGTTAGCACTAGAAAGGccgcaaaaatatgtaaagagtTGTCTGAATCTGGTGTAGAGATATTGTCGCCATCCCAACCTGGAATTTAA
- Protein Sequence
- MIICDTTSVNTGRHHGVVTRLQNFFKSFSLPAPQYIGCQHHVLDLMLKHVMDELLEGKTSSPNISYNFIPNLIENYDDLKKEYEQNKECIKVKSIKWRNDMQYLYELVESFKYFEKNERFPYIKFKAIPALSNARWNSRAILALLAFILIPEYRLQLYPIYNVPLDDDYKLPTIMDDEVSSDDDKTYKPPASLLQKKKPMKPAVNLVMNANVSTRKAAKIYNVPLDDDYKLPTIMDDEVSSDDDITYKPPASLLQKKKPMKPAVNLVMNANVSTRKAAKICKELSESGVEILSPSQPGI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -