Apur003337.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639993.1:54590454-54590915[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-09 2.8e-06 28.8 0.0 5 39 1 35 1 40 0.89
Sequence Information
- Coding Sequence
- ATGCGAAAGGCCATAGCTGCTGTGAAAAGAGGAGAAATGGGAATACTATTGGCCTCCAAAACATTTGAAGTTCCACACACCACACTTCAGCGAATGGCTAGAAGCGAGGAGCCGGCAGAGGAGCTGCTTTCCAGAAAATTAGGCAGGAAACCTGTGTGCAGCGCAGAAATTGAAAGCAAGCTTGTCAAATGTTCTTTGGAGATGGAACGTCGCTTTTGGGGACTAAGTAGATTGGACTTGCGATCCCTTGCATTTCAAGTGgcacttaaaaacaatattcctaACAAGTTCAATGTGTTAGCAAAATATGAAGGCAAAGACTGGTTGAATGGGTTTTGCAAACgccatagtaaaattttaagcttaCGTACACCAACTGGCACTTCTTTTGACAGGGCAAAAGGATTCACACGTCAAAACGTTGCTGCCTTTTTTAGTTTACTTGAAAATGAGTATACATAA
- Protein Sequence
- MRKAIAAVKRGEMGILLASKTFEVPHTTLQRMARSEEPAEELLSRKLGRKPVCSAEIESKLVKCSLEMERRFWGLSRLDLRSLAFQVALKNNIPNKFNVLAKYEGKDWLNGFCKRHSKILSLRTPTGTSFDRAKGFTRQNVAAFFSLLENEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091132;
- 90% Identity
- iTF_00091128; iTF_00091107; iTF_00091108; iTF_00091153; iTF_00091133;
- 80% Identity
- -