Apur012012.1
Basic Information
- Insect
- Anomoia purmunda
- Gene Symbol
- -
- Assembly
- GCA_951828415.1
- Location
- OX639993.1:127604423-127606308[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-13 3.4e-10 41.3 0.0 3 37 13 47 11 53 0.91 2 2 3.5 2.9e+03 -0.1 0.0 25 38 168 181 168 186 0.79
Sequence Information
- Coding Sequence
- ATGCCTAAAGCTGGAGAAATACGAAAGTGGAATAAGGAGAATATGCAAAAGGCCATAGAAGCTGTTCGAAAAGGAGAAATGGGTATTTTTTTGGCGTCCAAAATCTATGATGTTCCGCACACAACATTGCAAAGAATGGCCAGAAGTGAAAAACCTATAAAAGAAATTCTTTCTATGAAATTAGGCCGCAGACCAGTTTTTTCTGAAGCAATTGAGAATGAACTTGTCAAGTATATTTTAGAAATGGAATCTAGATACTGGGGATTAACAAGGAAAGACGTCAGATCGCTGGCTTTCCAAGTTGCAAACAAAAACtcttttccaaataaattttcaattgcagAAGAATGTGCCGGAAAAGATTGGCTTAAAGCATTTTGCAACcgccacaaaaatattttaagttttcgcATACCTACAGGAACATCAATAGACCGCGCTAAAGGCTTTACGAAAGAAAATGTTcagcattttttcaatttactggaggagcaatatttaaaatataacattcCTGCTAGTCGAATTTGGAATGTAGATGAAACCGGGCTCACCGTAGTTCAGTCCAAACAACCACAGGTTTTAGGTCAAAAAGGAAAGAAACAGATTGGTGCAATGACTTCTGCCGAACGTGGATCTTTAATTACAGTGATATCTTGCATGAGTGCAGGAGGATCATTTATACCaccgtattttatttttccgaggAAAAATTTGAACGCCCAGCTAATGAAAGATGCGCCACCGGGATCCAAGTGCTCATGCCACATATCCGGCTGGGTTCAAATACCTATATTTACGGAGTGGTTTAaacatttcttaagtttttcaaaacCTTCGAAGGACGAACCTGCCTTGCTGATTTTAGATGGGCATTATAGCCATACacgaaatattgatattttagaTTTGGCACGCGAGAATGGCGTTATAATTTTGTCACTTCCACCACACTCCACCCATAAAATGCAACCTCTGGATAGAACTTTTATGGGCCCACTAAAGATATACTACAATGATGAAATTAGGCGATATTCTCGTGAGCAAGGAAGAAAATTGAACCAGTACGATCTTGTTGGCTTATTTACTAAAGCATACTTGAAAGTACAATCTGGACAAATCGCAACTAATGGCTTCAAAGTCACAGGAATATACCCGTTcgacaaaaacatattttcaaatgcaGATTTTATTGCAGGAGAAATTGAGCAAAGCACTGAGCCAGAACGAGAAATGGCTGCGGAAATTAATTTAGAGGTGCATAATGAATCACATGTCGCGCTGCGTATGGACGAGTTCAATGACAATATAGCAAGTACAAGCAAGGGTTTATCGCGTACACTTCCTGTCACACAAAATCGGTCTTCTGTCATATCTGGGCATATAACACCGTGGGAGATCTCCCCACCACCTAAGTTAAAAAGGCAAGAAGGAAACCGAGGAAGAAAATGCAAGCCTACTATATTAACTAGCTCtccttataaaaatcaattagaagAAAGCCATAgtgctaaaaaaacaaaaatcgccaGGACCGattgcaaaagaaaacaatcaaaacCCAAAACTAAGGCCTTGAAACCGGATGAATCCTCTAGCGATTCTGTAGCAACCGTAACTTTCGATGAATCTGATGCCGAAGAATTTTTTGAGGACAGTCCTCCCTCACACAATACGCCGTgcgtattttgtaaaataatttacaacgAAGACCCAACCATCCAAAAATGGACATCGTGCATACAATGCGACTTAATTTGGGCTCACCAAAAATGCGTACCACAACGCAGTGCAATTTTTCTATGTCAATCCTGCCTATAA
- Protein Sequence
- MPKAGEIRKWNKENMQKAIEAVRKGEMGIFLASKIYDVPHTTLQRMARSEKPIKEILSMKLGRRPVFSEAIENELVKYILEMESRYWGLTRKDVRSLAFQVANKNSFPNKFSIAEECAGKDWLKAFCNRHKNILSFRIPTGTSIDRAKGFTKENVQHFFNLLEEQYLKYNIPASRIWNVDETGLTVVQSKQPQVLGQKGKKQIGAMTSAERGSLITVISCMSAGGSFIPPYFIFPRKNLNAQLMKDAPPGSKCSCHISGWVQIPIFTEWFKHFLSFSKPSKDEPALLILDGHYSHTRNIDILDLARENGVIILSLPPHSTHKMQPLDRTFMGPLKIYYNDEIRRYSREQGRKLNQYDLVGLFTKAYLKVQSGQIATNGFKVTGIYPFDKNIFSNADFIAGEIEQSTEPEREMAAEINLEVHNESHVALRMDEFNDNIASTSKGLSRTLPVTQNRSSVISGHITPWEISPPPKLKRQEGNRGRKCKPTILTSSPYKNQLEESHSAKKTKIARTDCKRKQSKPKTKALKPDESSSDSVATVTFDESDAEEFFEDSPPSHNTPCVFCKIIYNEDPTIQKWTSCIQCDLIWAHQKCVPQRSAIFLCQSCL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00091100;
- 90% Identity
- iTF_00091100;
- 80% Identity
- -