Basic Information

Gene Symbol
Ubp1
Assembly
GCA_951828415.1
Location
OX639997.1:71137628-71154554[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-32 5.9e-28 99.6 0.1 74 186 97 208 80 218 0.88
2 2 5.5e-14 9.4e-10 40.0 0.2 187 222 262 297 247 298 0.91

Sequence Information

Coding Sequence
atgGACTCGCGAAGGAACGCATGGGTTTTTGAGGTGCTACATTGCACGGAAGGAGGAGTTCCAGCACCCGAAAAAGAAGAGGCTGGCGTTTACCAACGTATTGGAAGACATGTTGTCTTTCGGCATTACGGATTCGGAGAGAACACCACTCTgcttggagtcgaagatgcggaCGCTGCTTCAGGCGTACAAAGCGGCGCGCGGGAAAtatattatagcaaaaaattggaaatcagGAAGTGGCAGGCACAGGAAAAACTGCGATTGAAGGCAGAATCCATCCAGCAATTCAACACTTTGTTGAAGagTGTCATCAAGATCTGTTTCCATGAGCGCCGCCTACAATTTATGGAGCGTGAACAAATGCAACAATGGCAAGCTTCGCGACCTGGCGAGCGAATTATTGAAGTTGACGTTCCACTTTCGTATGGCCTCTGTCATGTATCGCAACcattaaatccaaattttttgaatacagTTGAAATATTCTGGGACCCATTGAAGGAAGTTGGGATTTACATTAAAGTCAATTGCATTTCAACTGAGTTTACTCCAAAAAAACATGGTGGCGAAAAAGGTGTACCATTTAGACTACAGATTGAAACATATATAGAATCAACTAATACTACAGGAACAACAGCAGCTGGAACCTTTTCAGCAGCCTCATCTGTTGGTTCGGCTCCAGCAGTAAGTCCAGCCACCACTGTACCATCACGAATCGGTATTGCAATGGCATCGGGCATATCGTCAAGCCACAACTCAAACAGCCACCCACTTGCTAGTGGAAAGCAACCGGTGCATGCAGCAGCTTGTCAAATCAAGGTTTTTAAACTAAAAGGAGCTGATCGCAAGCATAAGCAGGATCGTGAAAAAATACAAAGGCGTCCTCAAGCAGAGCAAGAAAAATTCCAGCCGAGTTATGAATGCACCATCATGAACGATATACCTTTAGAGTTGATAACCCCAACATCATCTGGTTGCTTTAGTCCTGAATAG
Protein Sequence
MDSRRNAWVFEVLHCTEGGVPAPEKEEAGVYQRIGRHVVFRHYGFGENTTLLGVEDADAASGVQSGAREIYYSKKLEIRKWQAQEKLRLKAESIQQFNTLLKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNPNFLNTVEIFWDPLKEVGIYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIESTNTTGTTAAGTFSAASSVGSAPAVSPATTVPSRIGIAMASGISSSHNSNSHPLASGKQPVHAAACQIKVFKLKGADRKHKQDREKIQRRPQAEQEKFQPSYECTIMNDIPLELITPTSSGCFSPE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-