Amar039760.1
Basic Information
- Insect
- Anisolabis maritima
- Gene Symbol
- stc
- Assembly
- GCA_010014785.1
- Location
- JAAAKE010007324.1:45067519-45070080[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 3.8e+04 -3.3 1.1 15 18 108 111 107 112 0.81 2 20 1.6 5.3e+04 -3.8 1.6 15 19 136 140 135 140 0.81 3 20 0.025 8.6e+02 1.9 1.1 2 10 167 175 167 175 0.94 4 20 4.3e-06 0.15 14.0 15.4 4 19 183 198 181 198 0.94 5 20 9.1e-07 0.031 16.2 12.7 3 19 235 251 233 251 0.92 6 20 0.36 1.2e+04 -1.7 1.2 8 13 256 261 255 262 0.79 7 20 0.52 1.7e+04 -2.2 0.3 6 10 281 285 280 287 0.85 8 20 2.7e-06 0.091 14.7 15.7 1 19 291 309 285 309 0.87 9 20 1.4e-06 0.048 15.5 15.3 1 19 352 369 352 369 0.97 10 20 1 3.5e+04 -3.2 2.0 5 10 395 400 395 400 0.93 11 20 0.0029 97 5.0 9.2 1 11 406 416 406 417 0.96 12 20 0.043 1.5e+03 1.2 1.1 4 10 421 427 420 427 0.92 13 20 3.6e-10 1.2e-05 27.0 14.2 1 19 433 451 433 451 0.98 14 20 1.7 5.6e+04 -3.9 2.8 15 18 480 484 479 485 0.51 15 20 2 6.8e+04 -5.4 12.7 1 19 490 508 490 508 0.79 16 20 0.12 4.1e+03 -0.2 1.2 7 13 512 518 512 519 0.86 17 20 1.8 6.2e+04 -4.0 0.4 9 11 526 528 525 529 0.77 18 20 5.9e-08 0.002 19.9 10.4 1 17 544 560 544 561 0.96 19 20 0.52 1.7e+04 -2.2 1.8 5 10 564 569 564 569 0.94 20 20 7.7e-06 0.26 13.2 16.2 1 19 576 595 576 595 0.97
Sequence Information
- Coding Sequence
- ATGTCAAATGCATCTGACTCATATATCTCTGGAAATCATAGAGAACAGCAGCAGTCTACTTACAATAATAGAAATGGAGGAGGCGGTCGAGGTGGGAATCGAGGCACTCGGAATAACAGATcatcaaattcttattataataattatagaggtTTTAGAGGAGGTTCAAGTAACAATAGCAATTTTAGACGGATTGATTTACATCGTCCAGGTCCAGATGAAGAAACTCAACGTGAACGTCTAGCTGAAGAATTGAATAGAGGCGCCCTTGAATGTTTAGTATGTTGTGAACGCATTCGTCAACAACAATCTATTTGGAGTTGTCCTAATTGTTATCACGTTCTGCATTTGAATTGTGTCGCTCGTTGGGCACGAGCTTCCCAAGATCAAAATTCGGGATGGCGTTGTCCCGCTTGTCAACATTTATCAGAACAAATTCCATCTGAATATCGTTGTTATTGTGGAGCTGTTCAAGATCCTCAATTTGATCCTTCATCAGGAGCTCATTCTTGTGGGCAGCTTTGTCAAAGGCCGTCAAATTGTCCACATAGATGCAAGTTATTATGTCACCCAGGTCCTTGTCCCAAATGCAGCACAAGCGTTTTAAGAAATTGCGGTTGTGGAAAAACAGAAAAGAGAGTACGATGCTCAGATGCACCTCTTCTATGTGGACAAATTTGTAACAAGTTGTTGGAATGCAAAGTACATTATTGTAGTCAGGAATGCCATGATGGTCCATGTCCATCTTGTAAGGAGATTGTTAAGCAAATTTGTCATTGCGGAAAAGCAACTCGTGAATTGCCGTGCACCGTTGAAACAGCTcacgaaaaatattattcttgtcAGGAGGCATGTGGCAAAATGCTTGCTTGTGACAATCATCATTGTGAGAAACCTTGCCATTCAGGCGATTGTCAACTTTGTTCACGTTTACCTTCGATAGTAAAATGCTGTCCATGtgggaagaaaattttagattccaATGATCCACAACGAAATTCATGTATAGATCCAATCCCGAGTTGTGGTCAAGTTTGCGGAAAGGAATTAAACTGTGGGCATCTCTGTGGGGAGATTTGTCATGAAGGTCCCTGCTCCCCTTGCACTCGTTCAACTCCTGTTCGATGTAGATGTGGAAATATAGAACGAGAAATTCCATGCCAAGCTGGCTCAAGGGATTTAAGATGtgagaaaaaatgtaataaaaaacgaGCTTGCGGAAAACACAAGTGCGGACAACCTTGCTGCATTGATTTAGAACATACCTGCCCTTTACCTTGCAATCGTCAACTTCCATGTGGAAATCATCGCTGTGAAGAGCTTTGCCATCGCGGACACTGTAAACCCTGTTGGCGTACCAGTTTCGATGAATTGAGATGTGAATGTGGCTTTAGTGTAATTTATCCACCTGTTCCTTGTGGTACGAGAAGACCACAATGTCCCCAACCATGTAGCCGACATCATGCATGTGGACATCCTCCTCTACACACCTGTCACTCAGAAGCTGAATGTCCTCCCTGTTCGGTCTTAACGGAGCGGCTTTGTCATGGAGGTCATGAATTGCGAAAAGCGGTCCCTTGTCATGTTGAATCTATATCTTGTGGACGACCTTGCGGAAAACCTTTGCCATGTGGACGACATAATTGTATTACACCATGTCATTCAGGGCCTTGTTTACCTCCAGGCAAAACTTGTCAACAAGCTTGCAACACACCAAGACCAGAGTGCGGTCACCCATGTGCTTCGCCTTGCCACGAAGGCTCTTGTCCTGACACTCCCTGTAAACAGGTGGTGAAGGTGACATGTCCATGCAAACATCGTTCTGCTTCCAAAATTTGTGCTGATAATGCTTCAGAATATAAACGTCTAGCTATGGCACAACTTGCTTCAAAGATGTCAGATTTAGCGCTAGGGTTATCTGTTCCAATCGGAGATGAAGCACATTCTGCCACAATCTCCTCTCCAACAATGTTTTCGAATGCACTTATGACTTTAGAATGCAATGATGAATGCAAAATTGTTGAACGAAATCGTCGAATGGCTATTGGcttgcaaattaaaaatcctgATTTAAGCGCAAAATTAACTCCACGTTATTCTGATACAATGCGAAATTGGGCAAAACGAGATCCAAATTTTTGTCGAGATGTTCATACTCGTTTAGAGCAGTTAGTAACATTAGCACAAAATTCTAAACAGAAAAGCCGAAGTCTTTCGTTTGAACCAATGAATCGAGATCGTCGGCAATTCATTCATGAATATTGCCAGCATTTTGGATGCCAATCAGAAGCGTATGACCCCGAACCTAAAAGAAACGTTGTCGCTACAGcaattaaagataaatcttGGTTACCCGCTTTAAGTTTATTAGAAGTAGTCGAACGAGAGGAAGGAAAACGTCGTTTACCAAGACCTGTGATGGCTTTAGATCGAGGAAACACTTTGCCGAAATCATCAATGGATGTTCTGGGACACAGACCTCCCCCGACGCAACAACAATCTACACCAGGCGCATGCATGGAGCCCaacattgattattttgatatgaaacCAAGGAattag
- Protein Sequence
- MSNASDSYISGNHREQQQSTYNNRNGGGGRGGNRGTRNNRSSNSYYNNYRGFRGGSSNNSNFRRIDLHRPGPDEETQRERLAEELNRGALECLVCCERIRQQQSIWSCPNCYHVLHLNCVARWARASQDQNSGWRCPACQHLSEQIPSEYRCYCGAVQDPQFDPSSGAHSCGQLCQRPSNCPHRCKLLCHPGPCPKCSTSVLRNCGCGKTEKRVRCSDAPLLCGQICNKLLECKVHYCSQECHDGPCPSCKEIVKQICHCGKATRELPCTVETAHEKYYSCQEACGKMLACDNHHCEKPCHSGDCQLCSRLPSIVKCCPCGKKILDSNDPQRNSCIDPIPSCGQVCGKELNCGHLCGEICHEGPCSPCTRSTPVRCRCGNIEREIPCQAGSRDLRCEKKCNKKRACGKHKCGQPCCIDLEHTCPLPCNRQLPCGNHRCEELCHRGHCKPCWRTSFDELRCECGFSVIYPPVPCGTRRPQCPQPCSRHHACGHPPLHTCHSEAECPPCSVLTERLCHGGHELRKAVPCHVESISCGRPCGKPLPCGRHNCITPCHSGPCLPPGKTCQQACNTPRPECGHPCASPCHEGSCPDTPCKQVVKVTCPCKHRSASKICADNASEYKRLAMAQLASKMSDLALGLSVPIGDEAHSATISSPTMFSNALMTLECNDECKIVERNRRMAIGLQIKNPDLSAKLTPRYSDTMRNWAKRDPNFCRDVHTRLEQLVTLAQNSKQKSRSLSFEPMNRDRRQFIHEYCQHFGCQSEAYDPEPKRNVVATAIKDKSWLPALSLLEVVEREEGKRRLPRPVMALDRGNTLPKSSMDVLGHRPPPTQQQSTPGACMEPNIDYFDMKPRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -