Amar038227.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anisolabis maritima
Gene Symbol
-
Assembly
GCA_010014785.1
Location
JAAAKE010007324.1:64748295-64756348[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.02 6.6 9.2 0.3 6 21 10 25 4 26 0.86
2 16 0.0079 2.6 10.5 0.0 2 21 32 51 31 52 0.93
3 16 0.037 12 8.4 0.7 1 23 157 177 157 177 0.80
4 16 0.031 10 8.6 0.3 2 23 421 443 420 443 0.93
5 16 0.035 12 8.5 0.3 2 23 462 483 461 483 0.97
6 16 3.2e-05 0.011 18.0 4.9 1 23 497 519 497 519 0.99
7 16 3.8 1.2e+03 2.1 0.0 2 23 546 568 546 568 0.86
8 16 1.6 5.4e+02 3.2 0.2 1 13 582 594 582 597 0.81
9 16 2.9e-05 0.0096 18.2 0.5 1 23 609 631 609 631 0.98
10 16 0.00031 0.1 14.9 2.3 1 23 637 659 637 659 0.98
11 16 1.3e-05 0.0042 19.3 2.0 1 23 665 687 665 687 0.98
12 16 1.8e-05 0.0059 18.8 4.5 1 23 693 715 693 715 0.98
13 16 0.0001 0.033 16.5 3.8 1 23 721 743 721 743 0.99
14 16 1.4e-05 0.0047 19.1 0.6 1 23 749 771 749 771 0.99
15 16 3e-05 0.0099 18.1 0.4 1 23 775 797 775 797 0.98
16 16 6.7e-06 0.0022 20.2 0.1 1 23 808 831 808 831 0.97

Sequence Information

Coding Sequence
atggGTACGTTAAATTGTCCTCTTTGTTGTGGAGAGACGTTTCCAAGTCAAGAGtcattaaaatatcatcttttaagTGTAacagataatttatattgtccTGATTGTGACACAAGATTTGATTCAATTCCTCTGCTTGCTCAACATTTGAATGGTTTTTGTGGCAAGGATTTTGAGGAGGATATGGATACCAAAGAGAATATCATTGATAATCTTCAACAGGTTGATACAAGACatattgtaattgttcaaaatgagaataatgaaatgaatacagTTACTTTAGATGAAGGGATATCTGAAGAACATGAATcaacaaatattaacaataatctaCCAGATTCAAGTATCACTGTGTGTGTAGGGCACAATatcaaaaatgatgatgatgtagaATGTGAtccaattgaattgaaaatcacAGAATCCTTGGAAGTTGAtcaagattttaatgaaaatggggAACAATATAGTTGTTCAATTTGTGATATGACATTCTCTTCAGTTATGGAACATATTAAAACCTATCATGATGGACAACAAGTTATCATTAAGgTTCCGGaaggtgaaaataataaagccatttttgatgatgatgacgatgttTTAAATGAGCTCAAATGTGATGATAGTCCATTAATTGAAATGGACCCTTTAGAAGAAGACgtggatgaagaagaagaagaagaagatgatgaagatgaggaagaaaatatcgaaaaaattcaagaatatatGGAATCGGAAGGtttagttgaatttaaaaataaagataatgacgAGGAAGATGAGAAAGACGAGGAAAGGGACAACCCTGGAAAAAATGCTGATATTATTGGAACAATCAAACAAGAACACTGTTTAGATCAAAATGGAATACTTTATGAACGAAAAGTAGTACAAATACAGAAATTTTGGGAGAAAGAtcaaccaaatgaaaataatctgaaTCCTCTTACTAATgttgggagaaaaaaagaaagaaaaaaaaggaaaaccctTCCTGagggtttgattaaaattattggtGGACCAGAAGCAGCTACAGACGACCAAACTATAGAACGATTACTTATGGAAGCACTAGAGACCAATCCATCAGTTTTTGAGTCGGACGATTGTCCACTTGaggtgaaatatttaattgatcagGAAGGCGGttctaaaatttccatttatatttgtaaattatgcAAAACTGAACATGAatcaatctcaaaatttttgatgcATGAATATACATGCGCAGCTAAAGGATTAAATTGTGACGAATGTGTTatggtttttaattcattacgAGCATTTAAAACACACAAAGCAAAAATCCACATGGAtaaatctgaaaagaaaatatatacgaaaaaaattttagaagaaccTGTTGTTTGTGAGTTTTGCGATACACCTTTTTGGACTATACGATCTCTTAAGATGCATAAACGAATGCACCTCCCAGAAGAGACACCGAGAGGAATTGAACCTGTTAGCTATAAATGTACAATATGTAATACTATTTGTAAAACGAAAAGAACGTTGACACAACATCAAAGAATTCATGAGAAGAATTTAACAGAAATTGAGAAACCTGAGTTATTAGAAGAAGCTGGGATCAATCTTTTAAGTTCTAGTGTTGCCGTTTGTCCAATATGTGCAGATTCATTTGAGACGGATGAAAAACTCTCTGAACATTGGGTTAACTCTCACTCGGATATGGCGGATGCAGATATCGGTGATCCATCTAAATTTATATGCCAAATTTGTGGCGAGAAAGTCTATCGACAATTTCAAGACGTTCACATGGCTGAACATTGTACGACaactaaatttaattgtgaaatttgtaaTCGATCATTTGATACATTAAATTTACTTGAACTCcataaaagaattcatttagaTGATAAACCTTTTAAGTGTGATGTTTGTAAAGAACACTTTACTGATATGGAATTATTAAGAGAACATAGACAAAATCATACAAACGAGAGACCATATTCATGTAATTATTGTGGTCGAGCATTTAAACGACCACATGAAAAAGTCAAACATGAACGAATACATACCGGTGAGAAACCACATGTCTGTTCTGTTTGTGGTATGCGATTCCgtgtaaaatattgtttaacttTGCATATGCGAACACATTCTGGTGTCAGACCGTATCAATGTGAATTCTGTGATAAACGTTTCCGATCACACAATGGCTATTCACAACATATTAAAATCCATTCAGATGAACGTTCTTTCAAATGTCCTTTTTGtccaaaatcttttaaaacaatagTTCAATTGGCTGGCCATAAAAACACTCATACAAAACCTTATTCTTGTTCTGTATGCAATCGACCATTCGCTTCGTTATATTCAATGCGCACTCATATGGCATCCCATGGAGTTGATGGTCGcaaagattctttaaaatttagttgTGAAATTTGTGGAGCCTCTTATGCCCGGAGTTTTGCTTTAAGAGACCATATGAAATCTgttcatgataaaaattttattccaacacAAACCAATTCACGAATTAAATATCAAGAAGACTTTGaatcagattaa
Protein Sequence
MGTLNCPLCCGETFPSQESLKYHLLSVTDNLYCPDCDTRFDSIPLLAQHLNGFCGKDFEEDMDTKENIIDNLQQVDTRHIVIVQNENNEMNTVTLDEGISEEHESTNINNNLPDSSITVCVGHNIKNDDDVECDPIELKITESLEVDQDFNENGEQYSCSICDMTFSSVMEHIKTYHDGQQVIIKVPEGENNKAIFDDDDDVLNELKCDDSPLIEMDPLEEDVDEEEEEEDDEDEEENIEKIQEYMESEGLVEFKNKDNDEEDEKDEERDNPGKNADIIGTIKQEHCLDQNGILYERKVVQIQKFWEKDQPNENNLNPLTNVGRKKERKKRKTLPEGLIKIIGGPEAATDDQTIERLLMEALETNPSVFESDDCPLEVKYLIDQEGGSKISIYICKLCKTEHESISKFLMHEYTCAAKGLNCDECVMVFNSLRAFKTHKAKIHMDKSEKKIYTKKILEEPVVCEFCDTPFWTIRSLKMHKRMHLPEETPRGIEPVSYKCTICNTICKTKRTLTQHQRIHEKNLTEIEKPELLEEAGINLLSSSVAVCPICADSFETDEKLSEHWVNSHSDMADADIGDPSKFICQICGEKVYRQFQDVHMAEHCTTTKFNCEICNRSFDTLNLLELHKRIHLDDKPFKCDVCKEHFTDMELLREHRQNHTNERPYSCNYCGRAFKRPHEKVKHERIHTGEKPHVCSVCGMRFRVKYCLTLHMRTHSGVRPYQCEFCDKRFRSHNGYSQHIKIHSDERSFKCPFCPKSFKTIVQLAGHKNTHTKPYSCSVCNRPFASLYSMRTHMASHGVDGRKDSLKFSCEICGASYARSFALRDHMKSVHDKNFIPTQTNSRIKYQEDFESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-